New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 595286577 (1.280)4 (0.070) 4/252 NT 5.1% coding (92/2184 nt) ppk polyphosphate kinase
?NC_002947 = 5952895 74 (1.290)coding (62/2184 nt) ppk polyphosphate kinase

GAGAAGATCAACAGGAACTTGAGGCGTTCCAGCAGCGGGTAGTTCTCGTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCTCTTCTGGGAGCTCCTGAGCATCCTTGATCGCGACAGGGCTTAGCACTTCATTATT  >  NC_002947/5952718‑5953013
                                                                                                                                                     |                                                                                                                                                     
gagaAGATCAACAGGAACTTGAGGCGTTCCAGCAGCGGGTAGTTCTCGTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCgg                                                                                                                                                      >  4:310958/1‑149 (MQ=255)
       tCAACAGGAACTTGAGGCGTTCCAGCAGCGGGTAGTTCTCGTCCAGTGCGTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGaggctgtg                                                                                                                                               >  2:10380‑M1/1‑141 (MQ=255)
       tCAACAGGAACTTGAGGCGTTCCAGCAGCGGGTAGTTCTCGTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGgc                                                                                                                                               >  5:243041/1‑149 (MQ=255)
          aCAGGAACTTGAGGCGTTCCAGCAGCGGGTAGTTCTCGTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGcgcg                                                                                                                                            >  8:93941/1‑149 (MQ=255)
          aCAGGAACTTGAGGCGTTCCAGCAGCGGGTAGTTCTCGTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGcgcg                                                                                                                                            >  5:59142/1‑149 (MQ=255)
           cAGGAACTTGAGGCGTTCCAGCAGCGGGTAGTTCTCGTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCgg                                                                                                                                           >  6:173349/1‑149 (MQ=255)
             ggAACTTGAGGCGTTCCAGCAGCGGGTAGTTCTCGTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCggg                                                                                                                                          >  4:181494/1‑148 (MQ=255)
              gAACTTGAGGCGTTCCAGCAGCGGGTAGTTCTCGTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCa                                                                                                                                        >  6:204891/1‑149 (MQ=255)
                    gAGGCGTTCCAGCAGCGGGTAGTTCTCGTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGACTGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGa                                                                                                                                   <  3:310958/148‑1 (MQ=255)
                    gAGGCGTTCCAGCAGCGGGTAGTTCTCGTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGa                                                                                                                                   <  6:166331/148‑1 (MQ=255)
                    gAGGCGTTCCAGCAGCGGGTAGTTCTCGTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAg                                                                                                                                  >  2:380358/1‑149 (MQ=255)
                     aGGCGTTCCAGCAGCGGGTAGTTCTCGTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGACAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGc                                                                                                                                 >  2:131440/1‑149 (MQ=255)
                      ggCATTCCAGCAGCGGGTAGTTCTCGTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGAGCGATGGTCGGGGACGGCGCGGGCACCGGAGc                                                                                                                                 <  1:44746/149‑1 (MQ=255)
                          ttCCAGCAGCGGGTAGTTCTCGTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAg                                                                                                                            <  6:246805/149‑1 (MQ=255)
                            ccAGCAGCGGGTAGTTCTCGTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGcc                                                                                                                          >  2:35874/1‑149 (MQ=255)
                             cagcagCGGGTAGTTCTCGTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCt                                                                                                                         <  2:275927/149‑1 (MQ=255)
                                cagcGGGTAGTTCTCGTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGaggctgtggctccggtgcccgcgccgtccccga                                                                                                                      <  1:10380‑M1/149‑34 (MQ=255)
                                   cGGGTAGTTCTCGTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGaggctgtggctccggtgcccgcgccgtccccgacca                                                                                                                   <  5:134622‑M1/149‑37 (MQ=255)
                                     ggTAGTTCTCGTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGaggctgtggctccggtgcccgcgccgtccccgaccatc                                                                                                                 <  7:334283‑M1/149‑39 (MQ=255)
                                     ggTAGTTCTCGTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGaccacc                                                                                                                 <  6:135629/149‑1 (MQ=255)
                                     ggTAGTTCTCGTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGaccacc                                                                                                                 <  7:88501/149‑1 (MQ=255)
                                       tAGTTCTCGTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTg                                                                                                               <  4:153679/149‑1 (MQ=255)
                                         gTTCTCGTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGTCCACCTGtt                                                                                                            <  1:380358/149‑1 (MQ=255)
                                          ttCTCGTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCCCAGCCTCGACCACCTGTTc                                                                                                           >  6:151770/1‑149 (MQ=255)
                                          ttCTCGTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTc                                                                                                           <  1:35874/149‑1 (MQ=255)
                                          ttCTCGTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTc                                                                                                           >  5:194534/1‑149 (MQ=255)
                                           tctcGTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTcc                                                                                                          >  7:113228/1‑149 (MQ=255)
                                             tcGTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTATCGTCAAGGCCAGGGACGGCGATGCTCGGGGACGGCGCGGGCACCGGAGCCCCAGCCTCGACCACCTGTTCCGc                                                                                                        >  8:264695/1‑149 (MQ=255)
                                               gTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCg                                                                                                         <  6:243748/146‑1 (MQ=255)
                                                   aGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAgg                                                                                                  <  3:110837/149‑1 (MQ=255)
                                                   aGTGCCTGCTCCAGCACACGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCAAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAgg                                                                                                  >  5:111100/1‑149 (MQ=255)
                                                       ccTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGgcg                                                                                                                                              >  3:264644/1‑102 (MQ=255)
                                                       ccTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGgcg                                                                                                                                              <  4:264644/102‑1 (MQ=255)
                                                       ccTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGGGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCg                                                                                              <  1:87985/149‑1 (MQ=255)
                                                       ccTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTACGCTACAGGCTCg                                                                                              >  7:142061/1‑149 (MQ=255)
                                                        cTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCgg                                                                                             <  7:154066/149‑1 (MQ=255)
                                                        cTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCgg                                                                                             <  2:296676/149‑1 (MQ=255)
                                                          gCTCCAGCACCCGGATATTGAACTCCAGTTGCGAGAGTTCGCGATGAATGTACAGCCTGCTGTCGTCCAGGCCAGGGACCGCGATGGTCGGGGACGGCGCCGGCACCGCAGCCACAGCCTCGACCACCTGTACCGCTACAGGCTCAGc                                                                                            >  6:205324/1‑148 (MQ=255)
                                                           cTCCAGCACCCGGATATTGAACTGCAGTTGCGAGCGTTCGGGATTAATGTACAGGGTGCTGTCGTCCAGGCCAGGGACGGGGATGGAACGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGc                                                                                            <  1:297504/148‑1 (MQ=255)
                                                           cTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGc                                                                                            <  8:75079/147‑1 (MQ=255)
                                                           cTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCa                                                                                          >  1:344404/1‑149 (MQ=255)
                                                              cAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCAcc                                                                                        <  6:59142/148‑1 (MQ=255)
                                                                gCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGa                                                                                     <  4:191134/149‑1 (MQ=255)
                                                                    ccGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAgg                                                                                   >  5:344468/1‑147 (MQ=255)
                                                                    ccGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAgg                                                                                   >  2:183533/1‑147 (MQ=255)
                                                                    ccGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCACGCCCACCTGTTCCGCTACCGGCTCGGCCACCGGAgg                                                                                   >  8:207768/1‑147 (MQ=255)
                                                                     cGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAg                                                                                <  6:194534/149‑1 (MQ=255)
                                                                          atTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGACAGGGACGGAGATGGTCGGGGACGGCGCGGGCACAGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTg                                                                           >  4:350470/1‑149 (MQ=255)
                                                                             gAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCg                                                                        >  3:94411/1‑149 (MQ=255)
                                                                               aCTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCggg                                                                      <  7:207768/149‑1 (MQ=255)
                                                                                     gTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTgc                                                                >  7:77658/1‑149 (MQ=255)
                                                                                     gTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTg                                                                 >  7:222137/1‑148 (MQ=255)
                                                                                         cGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAgg                                                                                   >  5:190554/1‑126 (MQ=255)
                                                                                         cGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAgg                                                                                   <  6:190554/126‑1 (MQ=255)
                                                                                                  gcgATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCtcttct                                                    <  5:204891/148‑1 (MQ=255)
                                                                                                   cgATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCTCTTCTgg                                                  <  5:173349/149‑1 (MQ=255)
                                                                                                    gATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCTCTTCTgg                                                  >  2:1030/1‑148 (MQ=255)
                                                                                                      tGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCTCTTCTGGGAg                                               <  1:1030/149‑1 (MQ=255)
                                                                                                             aCAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCTCTTCTGGGAGCTCCt                                          >  1:51746/1‑147 (MQ=255)
                                                                                                                 gctgctGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCTCTTCTGGGAGCTCCTGAGCAt                                    >  7:71371/1‑149 (MQ=255)
                                                                                                                    gctgTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCggg                                                                      >  3:329233/1‑112 (MQ=255)
                                                                                                                    gctgTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCggg                                                                      <  4:329233/112‑1 (MQ=255)
                                                                                                                     ctgTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCTCTTCTGGGAGCTCCTGAGCATCCtt                                >  2:378120/1‑149 (MQ=255)
                                                                                                                     ctgTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCTCTTCTGGGAGCTCCTGAGCATCCt                                 <  2:51746/148‑1 (MQ=255)
                                                                                                                      tgTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGGGGGGTCTGCAGCATCTCTTCTGGGAGCTCCTGAGCATCCtt                                >  4:31607/1‑148 (MQ=255)
                                                                                                                      tgTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCTCTTCTgg                                                  >  3:173989/1‑130 (MQ=255)
                                                                                                                      tgTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCTCTTCTgg                                                  <  4:173989/130‑1 (MQ=255)
                                                                                                                        tcgtcCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCTCTTCTGGGAGCTCCTGAGCATCCTTGa                              <  7:93941/148‑1 (MQ=255)
                                                                                                                        tcgtcCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCTCTTCTGGGAGCTCCTGAGCATCCTTGa                              <  4:183757/148‑1 (MQ=255)
                                                                                                                        tcgtcCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCTCTTCTGGGAGCTCCTGAGCATCCTTGAt                             <  8:222137/149‑1 (MQ=255)
                                                                                                                          gtcCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCTCTTCTGGGAGCTCCTGAGCATCCTTGATcg                           >  2:118866/1‑149 (MQ=255)
                                                                                                                           tcCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCTCTTCTGGGAGCTCCTGAGCATCCTTGATcgc                          >  6:275102/1‑149 (MQ=255)
                                                                                                                            ccaggccaggGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCTCTTCTGGGAGCTCCTGAGCATCCTTGATcgc                          >  8:118902/1‑148 (MQ=255)
                                                                                                                             caggccaggGACGGCGATGGTCGGGGACTGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCTCTTCTGGGAGCTCCTGAGCATCCTTGATCGCGa                        <  7:264695/149‑1 (MQ=255)
                                                                                                                             caggccaggGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCTCTTCTGGGAGCTCCTGAGCATCCTTGATCGCGa                        <  2:344404/149‑1 (MQ=255)
                                                                                                                             caggccaggGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCTCTTCTGGGAGCTCCTGAGCATCCTTGATCGCGa                        <  6:243041/149‑1 (MQ=255)
                                                                                                                               ggccaggGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCTCTTCTGGGAGCTCCTGAGCATCCTTGATCGCGACa                      <  3:181494/149‑1 (MQ=255)
                                                                                                                                gccaggGACGGCGATGGTCGGGGACGGCGCGGGCATCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCTCTTCTGGGAGCTCCTGAGCATCCTTGATCGCGACAg                     >  6:317704/1‑149 (MQ=255)
                                                                                                                                gccaggGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTTGCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCTCTTCTGGGAGCTCCTGAGCATCCTTGATCGCGa                        >  1:113537/1‑147 (MQ=255)
                                                                                                                                   aggGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCTCTTCTGGGAGCTCCTGAGCATCCTTGATCGCGACAGGGc                  <  5:275102/149‑1 (MQ=255)
                                                                                                                                             gATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTcgaccatcgccgtccctggcctggacgacagcagcctgtacattcatcgcgaactctcgcaactgcagttcaatatccgggtgctggagcaggcactggacgagaactacc          <  7:334283‑M2/149‑112 (MQ=255)
                                                                                                                                             gATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCTCTTCTGGGAGCTCCTGAGCATCCTTGATCGCGACAGGGCTTAGCACtt         >  3:143148/1‑149 (MQ=255)
                                                                                                                                              aTGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCTCTTCTGGGAGCTCCTGAGCATCCTTGATCGCGACAGGGCTTAGCACTTc        <  4:143148/149‑1 (MQ=255)
                                                                                                                                               tGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTcgaccatcgccgtccctggcctggacgacagcagcctgtacattcatcgcgaactctcgcaactgcagttcaatatccgggtgctggagcaggcactggacgagaactacccg        <  5:134622‑M2/149‑114 (MQ=255)
                                                                                                                                                ggTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCTCTTCTGGGAGCTCCTGAGCATCCTTCATCGCGACAGGGCTTAGCACTTCat      >  2:239748/1‑149 (MQ=255)
                                                                                                                                                 gTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCTCTTCTGGGAGCTCCTGAGCATCCTTGATCGCGACAGGGCTTAGCACTTCat      <  4:94411/148‑1 (MQ=255)
                                                                                                                                                   tCGGGGACGGCGCGGGCACCGGAGCCACAGCCTcgaccatcgccgtccctggcctggacgacagcagcctgtacattcatcgcgaactctcgcaactgcagttcaatatccgggtgctggagcaggcactggacgagaactacccgctg     <  1:10380‑M2/149‑117 (MQ=255)
                                                                                                                                                     ggggACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCTCTTCTGGGAGCTCCTGAGCATCCTTGATCGCGACAGGGCTTAGCACTTCattatt  <  1:183533/149‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GAGAAGATCAACAGGAACTTGAGGCGTTCCAGCAGCGGGTAGTTCTCGTCCAGTGCCTGCTCCAGCACCCGGATATTGAACTGCAGTTGCGAGAGTTCGCGATGAATGTACAGGCTGCTGTCGTCCAGGCCAGGGACGGCGATGGTCGGGGACGGCGCGGGCACCGGAGCCACAGCCTCGACCACCTGTTCCGCTACAGGCTCGGCCACCGGAGGCAGGTCTGGCGGGGTCTGCAGCATCTCTTCTGGGAGCTCCTGAGCATCCTTGATCGCGACAGGGCTTAGCACTTCATTATT  >  NC_002947/5952718‑5953013

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.