New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5992771 =72 (1.200)3 (0.050) 3/250 NT 4.6% coding (762/1263 nt) opdB proline‑specific outer membrane porin D
?NC_002947 5992841 = 55 (0.960)coding (832/1263 nt) opdB proline‑specific outer membrane porin D
Rejected: Frequency below/above cutoff threshold.

CTTCGCACCCAACGGGCCGTTCGGCGCCGCACTGTATGCCGGGCAACTGGAAAACACCTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGC  >  NC_002947/5992624‑5992911
                                                                                                                                                   |                                                                                                                                            
cTTCGCACCCAACGTGCCGTTCGGCGCCGCACTGTATGCCGGGCAACTGGAAAACACCTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCa                                                                                                                                             <  6:239253/149‑1 (MQ=255)
cTTCGCACCCAACGGGCCGTTCGGCGCCGCACTATATGCCGGGCAACTGGAAAACACCTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCa                                                                                                                                             >  8:85260/1‑149 (MQ=255)
     cACCCAACGGGCCGTTCGGCGCCGCACTGTATGCCGGGCAACTGGAAAACACCTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGcc                                                                                                                                        >  2:269002/1‑149 (MQ=255)
      aCCCAACGGGCCGTTCGGCGCCGCACTGTATGCCGGGCAACTGGAAAACACCTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCg                                                                                                                                       >  1:142987/1‑149 (MQ=255)
        ccACCGGGCCGCGCGCCGCCGCACTGTATGCCGCGCAACTCGAAACCACCCGGCGCCAGGCCTACCTCCCCCTGCACCTGCCCCACCGCAACTGGCGCCTGGACGGCAACCTGCACAAAACCCGCGCTACCCGCAACGCCAGCGCCggg                                                                                                                                     <  2:129386/149‑1 (MQ=255)
        ccAACGGGCCGTTCGGCGCCGCACTGTATGCCGGGCAACTGGAAAACACCTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCggg                                                                                                                                     <  7:21186/149‑1 (MQ=255)
        ccAACGGGCCGTTCGGCGCCGCACTATATGCCGGGCAACTGGAAAACACCTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCggg                                                                                                                                     <  7:85260/149‑1 (MQ=255)
          aaCGGGCCGTTCGGCGCCGCACTGTATGCCGGGCAACTGGAAAACACCTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGc                                                                                                                                   >  4:351106/1‑149 (MQ=255)
              ggCCGTTCGGCGCCGCCCTGTCTGCCGGGCAACTGGAAAACACCTGGCGCCAGGCCTACCTCAACCTGCACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATc                                                                                                                               <  8:231067/149‑1 (MQ=255)
              ggCCGTTCGGCGCCGCACTGTATGCCGGGCAACTGGAAAACACCTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCGGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATc                                                                                                                               <  8:235808/149‑1 (MQ=255)
              ggCCGTTCGGCGACGCACTGGATGCCGGGCCTCTGGAAAACTCCTTGCGCCAGGCCTACCTCAACCTGAACCTGGCCAAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATc                                                                                                                               <  4:84678/149‑1 (MQ=255)
                            gcACTGTATGCCGGGCAACTGGAAAACACCTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTa                                                                                                                 >  5:376922/1‑149 (MQ=255)
                              aCTGTATGCCGGGCAACTGGAAAACACCTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTa                                                                                                                 >  2:199132/1‑147 (MQ=255)
                               cTGTATGCCGGGCAACTGGAAAACACCTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCggg                                                                                                                                     >  2:35530/1‑126 (MQ=255)
                               cTGTATGCCGGGCAACTGGAAAACACCTGGCGCCAGGCCTACCTAAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAg                                                                                                              >  2:340258/1‑149 (MQ=255)
                                    tGCCGGGCAACTGGAAAACACCTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCctg                                                                                                          <  6:376922/148‑1 (MQ=255)
                                    ctcgccagggccgttgaagtcggcgtacttgatcgcgttggccaggtagatggagtcgccgccgacgaagtcgaacggggtgtcgccctcgaccttctggtaggccacgctCAgc                                                                                                                                           <  7:221641‑M1/4‑1 (MQ=255)
                                    ctcgccagggccgttgaagtcggcgtacttgatcgcgttggccaggtagatggagtcgccgccgacgaagtcgaacggggtgtcgccctcgaccttctggtaggccacgctCAgc                                                                                                                                           >  8:221641‑M1/112‑115 (MQ=255)
                                         ggCAACTGGAAAACACCTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGcc                                                                                                    <  3:263147/149‑1 (MQ=255)
                                            ggccgttgaagtcggcgtacttgatcgcgttggccaggtagatggagtcgccgccgacgaagtcgaacggggtgtcgccctcgaccttctggtaggccacgctCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAg                                                                                                 <  8:310723‑M1/46‑1 (MQ=255)
                                            aaCTGGAAAACACCTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAg                                                                                                 >  5:145582/1‑149 (MQ=255)
                                            aaCTGGAAAACACCTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAg                                                                                                 >  6:178989/1‑149 (MQ=255)
                                            aaCTGGAAAACACCTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCATCGCTTACAGCCTGCTGGCCAAg                                                                                                 >  4:290566/1‑149 (MQ=255)
                                              cTGGAAAACACCTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTa                                                                                               >  1:343654/1‑149 (MQ=255)
                                               tGGAAAACACCTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTa                                                                                               >  4:287961/1‑148 (MQ=255)
                                               tGGAAAACACCTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTa                                                                                               >  3:120042/1‑148 (MQ=255)
                                                 gAAAACACCTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTa                                                                                               <  4:120042/146‑1 (MQ=255)
                                                 gAAAACACCTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACa                                                                                             <  1:232540/148‑1 (MQ=255)
                                                  aaaaCACCTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAg                                                                                            <  7:175409/148‑1 (MQ=255)
                                                  aaaaCACCTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGc                                                                                           <  7:272498/149‑1 (MQ=255)
                                                      cacCTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCg                                                                                       >  6:187570/1‑149 (MQ=255)
                                                      cacCTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCg                                                                                       >  7:304569/1‑149 (MQ=255)
                                                       acCTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCgg                                                                                      >  1:253488/1‑149 (MQ=255)
                                                       acCTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCgg                                                                                      >  2:230733/1‑149 (MQ=255)
                                                        ccTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGgc                                                                                     <  6:295901/149‑1 (MQ=255)
                                                        ccTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGgc                                                                                     <  4:60263/149‑1 (MQ=255)
                                                         cTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGgcg                                                                                    >  6:86904/1‑149 (MQ=255)
                                                            gcgcCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGcc                                                                                  >  3:146655/1‑148 (MQ=255)
                                                              gcCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAg                                                                               >  7:292394/1‑149 (MQ=255)
                                                              gcCAGGCCTACCTCAACCTGAACCTGGCCAAAGGAAAATGGCGCCTGGACGGCAACATCTACAAAACCCCCGATACCGGCAACGCCAGCCCCGGGGCGATCGACACCCACGCTTACAGCCTGCAGGCCAAGTACAGCTTCCGCGCCCac                                                                               >  4:349478/1‑148 (MQ=255)
                                                                  gatcgcgttggccaggtagatggagtcgccgccgacgaagtcgaacggggtgtcgccctcgaccttctggtaggccacgctCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGgcg                                                                            >  7:310723‑M1/82‑148 (MQ=255)
                                                                    ccTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGa                                                                                                                             >  6:67702/1‑97 (MQ=255)
                                                                    ccTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGa                                                                                                                             <  5:67702/97‑1 (MQ=255)
                                                                     cTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGa                                                                        <  7:214140/149‑1 (MQ=255)
                                                                        gttggccaggtagatggcgtcgccgccgacgaagtcgaacggggtggcgccctcgaccttctggtaggccacgctCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCg                                                                     >  5:246430‑M1/76‑149 (MQ=255)
                                                                            aacctgaacctgGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTgg                                                                  <  1:304317/148‑1 (MQ=255)
                                                                            aacctgaacctgGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTgg                                                                  >  2:304317/1‑148 (MQ=255)
                                                                            aacctgaacctgGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTg                                                                   <  6:276090/147‑1 (MQ=255)
                                                                            aacctgaacctgGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTg                                                                   <  1:89396/147‑1 (MQ=255)
                                                                               ctgaacctgGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTa                                                              <  1:171202/149‑1 (MQ=255)
                                                                                  aacctgGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTAc                                                             <  1:199132/147‑1 (MQ=255)
                                                                                  aacctgGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCa                                                           <  2:343654/149‑1 (MQ=255)
                                                                                     ctgGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGaa                                                        <  3:351106/149‑1 (MQ=255)
                                                                                       ggCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCCCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAgg                                                      >  4:149968/1‑149 (MQ=255)
                                                                                        gCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAg                                                       <  4:146655/147‑1 (MQ=255)
                                                                                        gCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAg                                                       <  3:287961/147‑1 (MQ=255)
                                                                                            aaGCCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAg                                                 <  6:19128/149‑1 (MQ=255)
                                                                                             aGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAgg                                                >  3:237776/1‑149 (MQ=255)
                                                                                              ggCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAggg                                               <  6:145582/149‑1 (MQ=255)
                                                                                               gCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGc                                              <  8:304569/149‑1 (MQ=255)
                                                                                                      gcgcCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACAccc                                       >  6:77231/1‑149 (MQ=255)
                                                                                                      gcgcCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACAccc                                       >  4:274474/1‑149 (MQ=255)
                                                                                                         ccTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACCCCCCGt                                    >  6:258838/1‑149 (MQ=255)
                                                                                                             gACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCTCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGa                                <  3:149968/149‑1 (MQ=255)
                                                                                                             gACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTc                                  <  3:274474/147‑1 (MQ=255)
                                                                                                             gACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTc                                  <  5:178989/147‑1 (MQ=255)
                                                                                                             gACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCg                                 >  5:109140/1‑148 (MQ=255)
                                                                                                              aCGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGAc                               <  5:187570/149‑1 (MQ=255)
                                                                                                                  cAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTtcg                           <  1:111947/149‑1 (MQ=255)
                                                                                                                      cTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTcgg                       >  2:52297/1‑149 (MQ=255)
                                                                                                                           cAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCggcggc                   >  3:129679/1‑148 (MQ=255)
                                                                                                                           cAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGgcggcg                  >  3:127853/1‑149 (MQ=255)
                                                                                                                            aaaaCCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGa                 >  5:355671/1‑149 (MQ=255)
                                                                                                                                 ccGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCa            <  5:258838/149‑1 (MQ=255)
                                                                                                                                 ccGCGATACCGGCAACGCCAGCGCCGGGGCCATCGACCCCCTCGCTTACAGCCTGCTGGCCAAGTCCAGCGTCGGCGCCCAGGCGCGGCGCGTGGCCTACCAGAAGGTCGCGGGCCCCGCCACGATCGACTACGGCGCCTGAGACACCa            >  4:281741/1‑149 (MQ=255)
                                                                                                                                          cGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTgg   <  1:52297/149‑1 (MQ=255)
                                                                                                                                          cGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTgg   <  1:230733/149‑1 (MQ=255)
                                                                                                                                          cGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTACTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCCTCTCCCTgg   >  4:29018/1‑149 (MQ=255)
                                                                                                                                           ggCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGc  >  1:142402/1‑149 (MQ=255)
                                                                                                                                                 gCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTcggcgg                    >  3:97018/1‑125 (MQ=255)
                                                                                                                                                 gCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTcggcgg                    <  4:97018/125‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                            
CTTCGCACCCAACGGGCCGTTCGGCGCCGCACTGTATGCCGGGCAACTGGAAAACACCTGGCGCCAGGCCTACCTCAACCTGAACCTGGCCCAAGGCAACTGGCGCCTGGACGGCAACCTGTACAAAACCCGCGATACCGGCAACGCCAGCGCCGGGGCGATCGACACCCTCGCTTACAGCCTGCTGGCCAAGTACAGCTTCGGCGCCCAGGCGCTGAGCGTGGCCTACCAGAAGGTCGAGGGCGACACCCCGTTCGACTTCGTCGGCGGCGACTCCATCTACCTGGC  >  NC_002947/5992624‑5992911

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.