| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1440000 = | NA (NA) | 57 (0.980) | 50/254 | NT | 100% | intergenic (‑331/‑328) | yveA/PP_1260 | aspartate‑proton symporter/transposase |
| ? | NC_002947 | = 1844451 | 0 (0.000) | coding (343/2754 nt) | gacS | sensor protein GacS | |||||
Only 100 of 127 total aligned reads displayed.
GCAGCGTGCCGTCGTGCGACAGCTCGATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGTTTGTGCGGCAATTCTCTCCAGTTGCGCAGGC > NC_002947/1844304‑1844599 | ttatgttgaacaaggtcttgaggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttagcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgagag > 5:152217‑M2/147‑149 (MQ=255) tgttgaacaaggtcttgaggagttcgaaaccagaagccaagaccggcaggtccgggctttgggtcgcaaagcgcggaaactgggggatcaactggtggccgcgtgagggcttagaaaaccatcgggtggattttgtttgatgaGAGtt > 5:111076‑M2/144‑148 (MQ=255) tgttgaacaaggtcttgaggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTg < 2:264439‑M2/6‑1 (MQ=255) gcGTGCCGTCGTGCGACAGCTCGATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatca < 8:70163‑M2/149‑5 (MQ=255) gtcgtGCGACAGCTCGATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcc < 5:117499‑M2/149‑12 (MQ=255) tcgtGCGACAGCTCGATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagccc < 6:162170‑M2/149‑13 (MQ=255) tGCGACAGCTCGATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttc > 8:80159‑M2/1‑134 (MQ=255) cttgaggagttcgaaaccagaagccaagaccggcaggtccgggctttgcttctcaaagccaggaaactggggtatcaactggttgccgcttgagtgattagaaaacaatttgttgcattttttttgattaGATTTGGGTGgcggttaag > 3:84778‑M2/131‑145 (MQ=255) cGACAGCTCGATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttcc > 6:137727‑M2/1‑132 (MQ=255) cTCGATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgc > 5:24108‑M2/1‑126 (MQ=255) ttcgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactgggggatcaactggtggccgcgtgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGggc > 6:363901‑M2/122‑149 (MQ=255) tctcTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgt < 5:127988‑M2/149‑29 (MQ=255) cgaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgctttttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGggcg < 1:72759‑M2/29‑1 (MQ=255) gaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGt < 8:195595‑M2/9‑1 (MQ=255) gaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGggcgg > 1:258394‑M2/119‑148 (MQ=255) gaaaccagaagccaagaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattgtgtttgatgaGAGTTGGGt > 7:195595‑M2/119‑127 (MQ=255) tctACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgtgctgcgctgtcg < 7:329123‑M2/149‑31 (MQ=255) aaaccagaagccaagaccggcaggtccgggctttgcttcgcaaaccccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGggc < 5:251296‑M2/28‑1 (MQ=255) ctACCCAGCCCAGCAGGCGCACGGCTTCGACCGGCACGACGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAACGGGTGGAG‑TAGATGCCACTGCGCTGCAGGAGatcacccagcccttccgg < 2:335024‑M2/136‑19 (MQ=255) cccagcccagCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcg < 3:53435‑M2/147‑33 (MQ=255) ccagcccagcAGGCGCTCGGGTTCGGGCGGGACGGGGTCGGTGGCCAGGTCGCGGTTGTGGCCGAAAACTGGCATGAGGTAGCGTGTGGCGGTCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgc > 1:109055‑M2/1‑115 (MQ=255) ccagcccagcAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcag < 2:284371‑M2/149‑36 (MQ=255) agcccagcAGGCGCTCGGCTTCGGCCGGCACGGTGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagca > 7:48655‑M2/1‑112 (MQ=255) gcagGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacat < 1:224260‑M2/148‑43 (MQ=255) gaccggcaggtccgggctttgcttcgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTc < 8:215977‑M2/46‑1 (MQ=255) cagGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatga > 4:53435‑M2/1‑105 (MQ=255) agGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgag > 6:117499‑M2/1‑104 (MQ=255) gcTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgt > 7:70163‑M2/1‑100 (MQ=255) ggccggcACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgag > 8:327317‑M2/1‑90 (MQ=255) ggccggcACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgag < 7:327317‑M2/135‑46 (MQ=255) tcttcgcaatgcccggaaactggggtatcaagtggtggccggttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGgc < 7:300256‑M2/65‑1 (MQ=255) gcACGGCGGCGGTGGCCAGGTCGCGTTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccg > 4:262583‑M2/1‑85 (MQ=255) aCGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgcagtcgcgcagcaaacatgaggtgtacggcttcagttccg < 1:317013‑M2/147‑65 (MQ=255) cgcaaagcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGt < 6:296283‑M2/69‑1 (MQ=255) gTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgac < 3:253809‑M2/149‑72 (MQ=255) agcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTc > 6:190707‑M2/75‑149 (MQ=255) agcccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCAGGCTCGGGCCGGCGTGGGCCCGGCGCGTGCGGTc > 4:65023‑M2/75‑149 (MQ=255) ccggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCAgg > 3:95033‑M2/72‑149 (MQ=255) cggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCggg < 3:349502‑M2/79‑1 (MQ=255) cggaaactggggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCggg < 2:258394‑M2/79‑1 (MQ=255) gTCGCGGTGGTGGCCGAAAACTGCCATCAGCTAGCGCGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctctcgcgcagcaaacatgaggtgtagggcttcagttccgcagcgaccctgacatttt < 8:254700‑M2/148‑83 (MQ=255) ggtatcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACg > 4:45815‑M2/61‑149 (MQ=255) gtggtgGCCGAAAACTGGCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCTCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaag > 7:339999‑M2/1‑60 (MQ=255) tcaactggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCa < 3:45815‑M2/92‑1 (MQ=255) gtggCCGAAAACTGGCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgtgctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaa > 8:329123‑M2/1‑57 (MQ=255) tggCCGAAAACTGGCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaa > 5:162170‑M2/1‑56 (MQ=255) gCCGAAAACTGGCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaagg < 4:321271‑M2/149‑96 (MQ=255) tggtggccgcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTgcgc < 6:95568‑M2/98‑1 (MQ=255) ccGAAAACTGGCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgatgtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggc > 1:284371‑M2/1‑53 (MQ=255) ccGAAAACTGGCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggc < 8:310019‑M2/149‑97 (MQ=255) tGGCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcc < 7:225855‑M2/149‑105 (MQ=255) gcttgattgctttgaaaacaatgggttggattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCg < 7:43836‑M2/106‑1 (MQ=255) gcttgagtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCg > 2:364075‑M2/44‑149 (MQ=255) gCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccg > 4:340096‑M2/1‑43 (MQ=255) aTCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggaccgg < 4:122817‑M2/148‑108 (MQ=255) aTCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggt > 2:337286‑M2/1‑41 (MQ=255) aTCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacaagaggtgtacggcttcagttacgcagcgacgctgacattttgaaaaagaaaaggcggt < 1:337286‑M2/140‑100 (MQ=255) tCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaa < 5:337898‑M2/133‑94 (MQ=255) tCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaa > 6:337898‑M2/1‑40 (MQ=255) agtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCGGGGCGGGAGCTTGCGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTg > 2:252546‑M2/39‑149 (MQ=255) gtgcttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGc < 5:363901‑M2/112‑1 (MQ=255) aGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagg < 8:6421‑M2/149‑112 (MQ=255) aGGTAGCGGGGGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagg > 3:281409‑M2/1‑38 (MQ=255) gTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggccc > 1:146631‑M2/1‑36 (MQ=255) gTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggccc < 2:146631‑M2/141‑106 (MQ=255) cttagaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTc > 2:114208‑M2/35‑148 (MQ=255) tAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggcc < 4:200196‑M2/149‑115 (MQ=255) tAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggcc > 3:369164‑M2/1‑35 (MQ=255) agaaaacaatgggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAgg > 1:40564‑M2/32‑149 (MQ=255) gTGGCG‑TCGTTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgc > 2:224260‑M2/1‑29 (MQ=255) g‑tcgtTGCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcg > 4:337622‑M2/1‑24 (MQ=255) ggttgcattttgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGTTTGTGCgg < 2:46171‑M2/128‑1 (MQ=255) gCCACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggctgttggcccggtagggccagccgccttttgcttt > 1:240994‑M2/1‑18 (MQ=255) ccACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaatgcggttggcccggtagggccagccgccttttgctttgt < 6:10219‑M2/149‑133 (MQ=255) cACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgtt > 6:275057‑M2/1‑16 (MQ=255) cACTGCGCTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgtt > 3:93562‑M2/1‑16 (MQ=255) tgtttgatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGTTTGTGCGGCAATtctctc > 5:291089‑M2/11‑148 (MQ=255) gcTGCAGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggtt > 5:10219‑M2/1‑10 (MQ=255) gatgaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAggg < 1:36049‑M2/119‑1 (MQ=255) gaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGTTTGTGCGGCAAtt < 4:178895‑M2/133‑1 (MQ=255) gaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGTTTGTGCGGCAATTCTCTCCAGTTgcg > 3:179974‑M2/3‑148 (MQ=255) gaGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGTTTGTGCGGCAATTCTCTCCAGTTgcg > 1:314518‑M2/3‑148 (MQ=255) aGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaataaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgt < 2:15007‑M2/149‑145 (MQ=255) aGGAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgt < 2:13133‑M2/149‑145 (MQ=255) ggAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgcggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaataggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgt > 3:102380‑M2/1‑4 (MQ=255) ggAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgtg < 1:36815‑M2/149‑146 (MQ=255) ggAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgt > 5:151410‑M2/1‑4 (MQ=255) ggAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgt > 4:151527‑M2/1‑4 (MQ=255) ggAGatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgt > 2:319436‑M2/1‑4 (MQ=255) ggAGatcacccagcccttccgggctgcgctgccgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgt > 3:156060‑M2/1‑4 (MQ=255) aGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGTTTGTGCGGCAATTCTCTCCAGTTgcgc < 6:291089‑M2/147‑1 (MQ=255) gagatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtccggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggcccgccgccttttgctttgttagggttcgggtgc < 2:312454‑M2/149‑147 (MQ=255) gagatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgtgc < 5:101066‑M2/149‑147 (MQ=255) gagatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgtgc > 8:107232‑M2/1‑3 (MQ=255) gagatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgtgc < 6:94420‑M2/149‑147 (MQ=255) gagatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctt > 7:23265‑M2/1‑3 (MQ=255) gagatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggt > 8:13312‑M2/1‑3 (MQ=255) gagatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggt < 7:13312‑M2/111‑109 (MQ=255) gatcacccagcccttccgggctgcgctgtcgcgcagcaaacatgaggtgtacggcttcagttccgcagcgacgctgacattttgaaaaagaaaaggcggttggcccggtagggccagccgccttttgctttgttagggttcgtgtgcgc < 5:114980‑M2/149‑149 (MQ=255) GTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGTTTGTGCGGCAATTCTCTCCAGTTGCGCAGGc > 3:267308‑M2/1‑149 (MQ=255) | GCAGCGTGCCGTCGTGCGACAGCTCGATCTCTACCCAGCCCAGCAGGCGCTCGGCTTCGGCCGGCACGGCGTCGGTGGCCAGGTCGCGGTGGTGGCCGAAAACTGGCATCAGGTAGCGGGTGGCG‑TCGTTGCCACTGCGCTGCAGGAGTTGGGTGCCGGTACCGCCGCTGGGCGGCAGATTGAGCATGCTCGGGCCGGCGTGGGCCAGGCGCGTGCGGTCCGGGGCCAGAAACGCCACTGCGCGCACATCGGCCTGCTCCAGGGTTTGTGCGGCAATTCTCTCCAGTTGCGCAGGC > NC_002947/1844304‑1844599 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |