New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1443080	30 (0.500)	4 (0.070)	4/252	NT	10.9%	intergenic (‑18/+158)	ghrB/PP_1262	2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator
	?	NC_002947	= 1443224	37 (0.640)					intergenic (‑162/+14)	ghrB/PP_1262	2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase/LysR family transcriptional regulator

GTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTG‑CCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGATACTGCCGCGATGGATAGAT  >  NC_002947/1443087‑1443369                                                                                                                                           |                                                                                                                                                  gTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCCCTACAACGGGGGGGCGCGGTGCCTTGTATGAGCGGGCTTT‑GCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGAAACCAAACATTTTACGCCCCCCCATTTCAGCCGCt                                                                                                                                        >  2:326616/1‑149 (MQ=255)            cccctctcTTCGCGGGCACGCCCGCTCCTCGGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTG‑CCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTg                                                                                                                               <  6:172633/140‑1 (MQ=255)                    ttCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTG‑CCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTg                                                                                                                               >  5:172633/1‑139 (MQ=255)                         gggCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTG‑CCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGa                                                                                                                >  2:95694/1‑149 (MQ=255)                           gccaccccGGTCCAGCGGGGGGGGGGGGTTGCTTTTTGGCGGGGGGTTGCCCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGAt                                                                                                               <  1:326616/144‑1 (MQ=255)                             acgcccgcccCCCCGGGGGCCCGCGGTCCCTCGTCGCAGCGGGCTGG‑CCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATggg                                                                                                            <  6:193129/147‑1 (MQ=255)                             aaGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTG‑CCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATggg                                                                                                            <  6:154570/149‑1 (MQ=255)                                 ccGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTG‑CCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCAttgcagagaagttgcccgatgaaaaagaccgtcctggcctt                                                                                                          <  4:169786‑M2/147‑42 (MQ=255)                                          ggggggggCGGGGGGCTTTGTCGTTGGGGGCTGC‑CCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGc                                                                                               <  3:175836/148‑1 (MQ=255)                                                    cgGTGCCTTGTAGGAGCGGGCTTG‑CCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGcgcg                                                                                     <  1:95694/149‑1 (MQ=255)                                                           ttGTAGGAGCGGGCTTG‑CCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGaa                                                                              >  6:212646/1‑149 (MQ=255)                                                           ttGTAGGAGCGGGCTTG‑CCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGaa                                                                              >  5:224119/1‑149 (MQ=255)                                                           ttGTAGGAGCGGGCTTG‑CCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGaa                                                                              >  3:324297/1‑149 (MQ=255)                                                                 gAGCGGGCTTG‑CCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTg                                                                        >  2:347298/1‑149 (MQ=255)                                                                   gCGGGCTTG‑CCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAAGCTACCATTGTCCGCCCCCGCAttgcagagaagttgcccgatgaaaaagaccgtcctggccttcagccgtatcaccccggccatggccgaacgcctg                                                                        <  3:163775‑M2/147‑76 (MQ=255)                                                                       gCTTG‑CCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGc                                                                   >  7:143395/1‑148 (MQ=255)                                                                       gCTTG‑CCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGc                                                                   >  7:113988/1‑148 (MQ=255)                                                                        cTTG‑CCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGa                                                                 <  4:324297/149‑1 (MQ=255)                                                                           g‑CCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGa                                                                 >  2:296100/1‑146 (MQ=255)                                                                           g‑CCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGa                                                                 <  1:296100/146‑1 (MQ=255)                                                                                       tGCCGGAACAGGCGAAATCAATGGTTAGCAAGCTACCATTGTCCGCCCCCGCAttgcagagaagttgcccgatgaaaaagaccgtcctggccttcagccgtatcaccccggccatggccgaacgcctgcagcaagacttcaacgtgatc                                                   >  4:163775‑M2/1‑53 (MQ=255)                                                                                        gCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTc                                                  >  4:343100/1‑149 (MQ=255)                                                                                          cGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGa                                                >  7:334297/1‑149 (MQ=255)                                                                                                 ggCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCAttgcagagaagttgcccgatgaaaaagaccgtcctggccttcagccgtatcaccccggccatggccgaacgcctgcagcaagacttcaacgtgatcctgcccaacc                                         >  3:169786‑M2/1‑43 (MQ=255)                                                                                                  gCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAg                                                        >  5:33209/1‑133 (MQ=255)                                                                                                  gCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAg                                                        <  6:33209/133‑1 (MQ=255)                                                                                                   cGAAATCAATGGTTCGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCAACCCAGGTCt                                       <  8:72889/149‑1 (MQ=255)                                                                                                         cAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGAGCt                                 >  7:145641/1‑149 (MQ=255)                                                                                                          aaTGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCtt                                >  2:308894/1‑149 (MQ=255)                                                                                                              gTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCATCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTGGATCTTGGc                             >  7:55011/1‑148 (MQ=255)                                                                                                                 aGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATc                          <  8:334297/148‑1 (MQ=255)                                                                                                                  gCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATc                          >  5:193381/1‑147 (MQ=255)                                                                                                                        tACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGATACt                  >  7:16972/1‑149 (MQ=255)                                                                                                                        tACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGATACt                  >  3:86471/1‑149 (MQ=255)                                                                                                                        tACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGATACt                  >  8:44943/1‑149 (MQ=255)                                                                                                                         aCCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGTACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATATTGGCATCCAGATACTg                 >  1:274113/1‑149 (MQ=255)                                                                                                                            aTTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTg                               >  1:298831/1‑132 (MQ=255)                                                                                                                            aTTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTg                               <  2:298831/132‑1 (MQ=255)                                                                                                                                tCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGATACTGCCGCGAt          >  1:373853/1‑149 (MQ=255)                                                                                                                                tCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGATACTGCCGCGAt          <  8:113988/149‑1 (MQ=255)                                                                                                                                tCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGATACTGCCGCGAt          <  8:143395/149‑1 (MQ=255)                                                                                                                                      cccGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGATACTGCCGCGATGGa       >  6:155926/1‑146 (MQ=255)                                                                                                                                        cGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGATACTGCCGCGATGGATAGAt  <  3:343100/149‑1 (MQ=255)                                                                                                                                           |                                                                                                                                                  GTGGGGCTGTGCTGGTCCCTTCGCGGGCAAGCCCGCTCCTACGGGGGGGCGCGGTGCCTTGTAGGAGCGGGCTTG‑CCCGCGAAGGTGCCGGAACAGGCGAAATCAATGGTTAGCAACCTACCATTGTCCGCCCCCGCATTGCAGCAGCTTTTTAGTTGGCGATCAGCACCTGATGGGTTTTCAGGTCTGCCTCATGCGCGGCAAGAATCTCTGGCAGCGAGTTGCGCAGGTACTCGACCCAGGTCTTGATCTTGGCATCCAGATACTGCCGCGATGGATAGAT  >  NC_002947/1443087‑1443369

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.