New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1731190 | 2 (0.030) | 4 (0.080) | 4/208 | NT | 51.4% | intergenic (‑103/+88) | dapE/PP_1526 | succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase |
? | NC_002947 | = 1731226 | 6 (0.130) | intergenic (‑139/+52) | dapE/PP_1526 | succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase |
CCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGAACGCCATCACCAGCGCTGCCACATAAGGCAACGAC > NC_002947/1731081‑1731368 | gcgTCTTTGGGGACTCCGGGGCATGGCTTGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCTCTGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtg > 8:156319‑M2/2‑146 (MQ=255) cGTCATGGGGGACTCCGGGTCATGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgg > 7:337823‑M2/1‑145 (MQ=255) gggACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgggc > 1:356916‑M2/1‑137 (MQ=255) tCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggcgcgggcgtgcc < 3:103565‑M2/149‑18 (MQ=255) aggcaaggcGTGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGCGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgggcgtgcccgcgaatgg > 4:275135‑M2/1‑123 (MQ=255) gggCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgggcgtg > 6:286913‑M2/1‑74 (MQ=255) gggCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgggcgtg < 5:286913‑M2/89‑16 (MQ=255) gggCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCA > 8:276478‑M1/1‑149 (MQ=255) gCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgggcgtgcccgcgaatgggccgtgctgcccgaaaccatttgatataagataacg > 4:246418‑M2/1‑44 (MQ=255) gCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgggcgtgcccgcgaatgggccgtgctgcccgaaaccatttgatataagataacg < 3:246418‑M2/106‑63 (MQ=255) tCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGgtgggagcgggcgtgcccgcgaatgggccgtgctgcccgaaaccatttgatataagagaacgcccctcagatttccccgccttgccttgccacggagtcgcccatga < 8:170027‑M2/149‑108 (MQ=255) tGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGAACGCCATCAc > 5:133804/1‑147 (MQ=255) tGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGAACGCCATCAc > 8:183614/1‑147 (MQ=255) cacaGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGAACGCCATCACCAGc < 4:33950‑M2/149‑2 (MQ=255) ctctGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGCCGACAGGAACGCCATCACCAGcgctgc < 1:284583‑M2/149‑7 (MQ=255) gCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGTCTTGGGCAGCGACGACAGGAACGCCATCACCAGCGCTGCCACATAAg > 6:31777/1‑149 (MQ=255) ccAAGCCGGTGGGAGCAGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGAACGcg > 8:79853/1‑119 (MQ=255) cAAGCCGgtgggagcgggcgtgcccgcgaatgggccgtgctgcccgaaaccatttgatataagataacgcccctcagatttccccgccttgccttgccccggagtcccccatgacggcccctgccgagctctcgcctacccttcaactg > 7:170027‑M2/1‑7 (MQ=255) cAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGAACGCCATCACCAGCGCTGCCACATAAGGCACCgcc > 8:118765/1‑147 (MQ=255) cAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGAACGCCATCACCAGCGCTGCCACATAAGGCAACGAc > 4:149624/1‑149 (MQ=255) | CCGTCATGGGGGACTCCGGGGCAAGGCAAGGCGGGGAAATCTGAGGGGCGTTATCTTATATCAAATGGTTTCGGGCAGCACGGCCCATTCGCGGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGACGACAGGAACGCCATCACCAGCGCTGCCACATAAGGCAACGAC > NC_002947/1731081‑1731368 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |