New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2301453 =	0 (0.000)	42 (0.710)	39/258	NT	100%	intergenic (‑97/‑234)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
	?	NC_002947	2925429 =	NA (NA)					intergenic (‑177/+388)	PP_2563/PP_2564	antibiotic biosynthesis protein/quercetin 2,3‑dioxygenase

CACAACGCTAGTGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGT‑CAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCC  >  NC_002947/2925294‑2925569                                                                                                                                        |                                                                                                                                              cacaACGCTAGTGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCtt                                                                                                                                  >  2:201748/1‑149 (MQ=255)  acaACGCTAGTGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTc                                                                                                                                 >  5:345021/1‑149 (MQ=255)  acaACGCTAGTGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAACGGTTGTTCCATGGGAGATCACCCAGCCCTTc                                                                                                                                 >  6:336212/1‑149 (MQ=255)        cTAGTGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAACGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCt                                                                                                                           <  5:336212/149‑1 (MQ=255)           gTGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTgcg                                                                                                                        >  6:206771/1‑149 (MQ=255)            tGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTgcgc                                                                                                                       >  2:74497/1‑149 (MQ=255)               aGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGt                                                                                                                    >  6:360229/1‑149 (MQ=255)                ggctggctGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTc                                                                                                                   <  2:308235/149‑1 (MQ=255)                 gctggctgATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCg                                                                                                                  >  5:294634/1‑149 (MQ=255)                    ggctgATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGcac                                                                                                               >  3:348933/1‑149 (MQ=255)                     gctgATGGCTCCAATATTTGAAGGCTGCATTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGcaca                                                                                                              <  7:160301/149‑1 (MQ=255)                     gctgATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGTTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGcaca                                                                                                              <  7:155433/149‑1 (MQ=255)                          tGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCaaa                                                                                                         <  1:201748/149‑1 (MQ=255)                            gcgcCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCaaa                                                                                                         >  8:10179/1‑147 (MQ=255)                            gcgcCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACa                                                                                                       <  5:103434/149‑1 (MQ=255)                             cgcCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCATCACTTCCGGGCTGAGCTGTCGCACAGCAAAAAg                                                                                                      >  1:324119/1‑149 (MQ=255)                               ccAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGa                                                                                                    <  6:338317/149‑1 (MQ=255)                                            gCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGt                                                                                        >  5:29983/1‑148 (MQ=255)                                            gCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTCTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGt                                                                                        >  4:121841/1‑148 (MQ=255)                                                             gggCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGT‑CAGATCTGCACTGACATc                                                                     >  1:271292/1‑149 (MQ=255)                                                                cAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGT‑CAGATCTGCACTGACATCgag                                                                  <  2:271292/149‑1 (MQ=255)                                                                    tCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACTT‑CAGATCTGCACTGACATCGAGATCt                                                              <  8:76475/149‑1 (MQ=255)                                                                     ccAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGG‑CAGATCTGCACTGACATCGAGATCTa                                                             <  7:10179/149‑1 (MQ=255)                                                                          gCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGT‑CAGATCTGCACTGACATCGAGATCTAGaaaa                                                        <  5:360229/149‑1 (MQ=255)                                                                                aGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGT‑CAGATCTGCACTGACATCGAGATCTAGAAAAGCATTc                                                  <  2:369225/149‑1 (MQ=255)                                                                                 gCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGT‑CAGATCTGCACTGACATCGAGATCTAGAAAAg                                                       <  5:376400/143‑1 (MQ=255)                                                                                 gCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGT‑CAGATCTGCACTGACATCGAGATCTAGAAAAg                                                       >  6:376400/1‑143 (MQ=255)                                                                                 gCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGT‑CAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCg                                                 >  3:36342/1‑149 (MQ=255)                                                                                           aTAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGT‑CAGATCTGCACTGACATCGAGATCTAg                                                            >  4:52042/1‑128 (MQ=255)                                                                                           aTAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGT‑CAGATCTGCACTGACATCGAGATCTAg                                                            <  3:52042/128‑1 (MQ=255)                                                                                                 cccTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGT‑CAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTa                                 <  1:154944/149‑1 (MQ=255)                                                                                                  ccTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGT‑CAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAg                                <  6:8307/149‑1 (MQ=255)                                                                                                    tGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGT‑CAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGt                              >  6:124151/1‑149 (MQ=255)                                                                                                    tGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGT‑CAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGt                              >  2:137047/1‑149 (MQ=255)                                                                                                      cTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGT‑CAGATCTGCACTGCCATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCa                            <  4:348933/149‑1 (MQ=255)                                                                                                      cTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGT‑CAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGt                              >  7:298910/1‑147 (MQ=255)                                                                                                      cTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGT‑CAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCa                            <  5:206771/149‑1 (MQ=255)                                                                                                              aCGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGT‑CAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGa                    <  1:74497/149‑1 (MQ=255)                                                                                                                gggTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGT‑CAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAAt                  <  6:345021/149‑1 (MQ=255)                                                                                                                 ggTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTACGGTCTGCGCTGTCGCACAGCAAACAGGATGCTAATGACGT‑CAGATCTTCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATa                 <  2:324119/149‑1 (MQ=14)                                                                                                                         gttgttCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGT‑CAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTa         >  1:178613/1‑149 (MQ=38)                                                                                                                         gttgttCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGT‑CAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTa         <  4:43399/149‑1 (MQ=38)                                                                                                                                cATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGT‑CAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTcc  >  4:208992/1‑149 (MQ=32)                                                                                                                                 aTGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCCTGACGTGGAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGGAGGTCCGCCGCCGAATACTTTGCTATGGTTcc  >  1:302379/1‑149 (MQ=11)                                                                                                                                        |                                                                                                                                              CACAACGCTAGTGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGT‑CAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCC  >  NC_002947/2925294‑2925569

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.