New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3126473	48 (0.800)	4 (0.070)	4/254	NT	8.9%	coding (952/960 nt)	PP_2744	ribose‑phosphate pyrophosphokinase family protein
	?	NC_002947	= 3126509	36 (0.620)					coding (916/960 nt)	PP_2744	ribose‑phosphate pyrophosphokinase family protein

GCGCGAACACCATCAGCATGGTGTGCGACACGGCCCTCATGGCCAAATGGCCCGACGATTTCAGGAGCAGGGACACTCCGCCGGCGCCACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAGGCATCGCACAGGCAGGCGAAAGGGGGCGATGCTGTCGGCCACCAGTACCCGTTCGAACGCGCCGCTGTCGAACAGCTCGCCACCGGTGGTGAACAGGCCGTGG  >  NC_002947/3126364‑3126645                                                                                                                                                  |                                                                                                                                         gcgcGAACACCATCAGCATGGTGTGCGACACGGCCCTCATGGCCAAATGGCCCGACGATTTCAGGAGCAGGGACACTCCGCCGGCGCCACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCACGCAGCTCGGCGACCAGggc                                                                                                                                       <  8:352192‑M2/149‑4 (MQ=255)     gAACACCATCAGCATGGTGTGCGACACGGCCCTCATGGCCAAATGGCCCGACGATTTCAGGAGCAGGGACACTCCGCCGGCGCCACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTg                                                                                                                                   >  2:163668/1‑149 (MQ=255)         acCATCAGCATGGTGTGCGACACGGCCCTCATGGCCAAATGGCCCGACGATTTCAGGAGCAGGGACACTCCGCCGGCGCCACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTag                                                                                                                               >  1:331387/1‑148 (MQ=255)           cATCAGCATGGTGTGCGACACGGCCCTCATGGCCAAATGGCCCGACGATTTCAGGAGCAGGGACACTCCGCCGGCGCCACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATcg                                                                                                                             >  3:93443/1‑149 (MQ=255)                 cATGGTGTGCGACACGGCCCTCATGGCCAAATGGCCCGACGATTTCAGGAGCAGGGACACTCCGCCGGCGCCACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGata                                                                                                                       <  8:86624/149‑1 (MQ=255)                  aTGGTGTGCGACACGGCCCTCATGGCCAAATGGCCCGACGATTTCAGGAGCAGGGACACTCCGCCGGCGCCACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTAGCGCCGatat                                                                                                                      >  8:162368/1‑149 (MQ=255)                    ggTGTGCGACACGGCCCTCATGGCCAAATGGCCCGACGATTTCAGGAGCAGGGACACTCCGCCGGCGCCACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATc                                                                                                                     >  1:204662/1‑148 (MQ=255)                     gtgtGCGACACGGCCCTGATGGCCAAATGGCCCGACGATTTCAGGAGCAGGGACACTCCGCCGGCGCCACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCa                                                                                                                   <  7:307644/149‑1 (MQ=255)                          cGACACGGCCCTCATGGCCAAATGGCCCGACGATTTCAGGAGCAGGGACACTCCGCCGGCGCCACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTg                                                                                                               <  5:285082/148‑1 (MQ=255)                               cGGCCCTCATGGCCAAATGGCCCGACGATTTCAGGAGCAGGGACACTCCGCCGGCGCCACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAg                                                                                                         <  1:225515/149‑1 (MQ=255)                                ggCCCTCATGGCCAAATGGCCCGACGATTTCAGGAGCAGGGACACTCCGCCGGCGCCACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAgg                                                                                                        >  4:187931/1‑149 (MQ=255)                                ggCCCTCATGGCCAAATGGCCCGACGATTTCAGGAGCAGGGACACTCCGCCGGCGCCACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAgg                                                                                                        <  2:146093/149‑1 (MQ=255)                                   ccTCATGGCCAAATGGCCCGACGATTTCAGGAGCAGGGACACTCCGCCGGCGCCACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAGGCAt                                                                                                     >  7:14154/1‑149 (MQ=255)                                                tGGCCCGACGATTTCAGGAGCAGGGACACTCCGCCGGCGCCACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAGGCATCGCACaggcaggc                                                                                        <  4:93443/149‑1 (MQ=255)                                                    ccGACGATTTCAGGAGCAGGGACACTCCGCCGGCGCCACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAGGCATCGCACAGGCAGGCGa                                                                                      >  2:5515/1‑147 (MQ=255)                                                     cgacgaTTTCAGGAGCAGGGACACTCCGCCGGCGCCACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAGGCATCGCACAGGCAGGCGAAAg                                                                                   >  6:252975/1‑149 (MQ=255)                                                           tttCAGGAGCAGGGACACTCCGCCGGCGCCACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAGGCATCGCACAGGCAGGCGAAAGGGGGCg                                                                             <  5:178892/149‑1 (MQ=255)                                                                 gAGCAGGGACACTCCGCCGGCGCCACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAGGCATCGCACAGGCAGGCGAAAGGGGGCGAt                                                                           >  2:326791/1‑145 (MQ=255)                                                                 gAGCAGGGACACTCCGCCGGCGCCACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAGGCATCGCACAGGCAGGCGAAAGGGGGCGAt                                                                           <  1:326791/145‑1 (MQ=255)                                                                       ggACACTCCGCCGGCGCCACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAGGCATCGCACAGGCAGGCGAAAGGGGGCGATGCTGTCGGc                                                                  >  3:37850/1‑148 (MQ=255)                                                                        gACACTCCGCCGGCGCCACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTg                                                                                                                                   <  6:198684/82‑1 (MQ=255)                                                                        gACACTCCGCCGGCGCCACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTg                                                                                                                                   >  5:198684/1‑82 (MQ=255)                                                                           acTCCGCCGGCGCCACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAGGCATCGCACAGGCAGGCGAAAGGGGGCGATGCTGTCGGccacca                                                             <  8:280834/149‑1 (MQ=255)                                                                                    gcgcCACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAGGCATCGCACAGGCAGGCGAAAGGGGGCGATGCTGTCGGCCACCAGTACCCGtt                                                    <  1:163668/149‑1 (MQ=255)                                                                                    gcgcCACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAGGCATCGCACAGGCAGGCGAAAGGGGGCGATGCTGTCGGCCACCAGTACCCGtt                                                    >  3:248449/1‑149 (MQ=255)                                                                                     cgcCACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAGGCATCGCACAGGCAGGCGAAAGGGGGCGATGCTGTCGGCCACCAGTACCCGTTc                                                   <  3:187931/149‑1 (MQ=255)                                                                                      gcCACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAGGCATCGCACAGGCAGGCGAAAGGGGGCGATGCTGTCGGCCACCAGTACCCGTTCg                                                  <  2:238523/149‑1 (MQ=255)                                                                                        cACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTGGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAGGCATCGCACAGGCAGGCGAAAGGGGGCGATGCTGTCGGCCACCAGTACCCGTTCGaa                                                <  2:153635/149‑1 (MQ=255)                                                                                            tGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAGGCATCGCACAGGCAGGCGAAAGGGGGCGATGCTGTCGGCCACCAGAACCCGTTCGACcgcg                                            >  2:345193/1‑149 (MQ=255)                                                                                              cgcCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAGGCATCGCACAGGCAGGCGAAAGGGGGCGATGCTGTCGGCCACCAGTACCCGTTCGAAcgcg                                            <  8:14154/147‑1 (MQ=255)                                                                                                      tCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGggcgcatgaccccggcgcaggtggcgccggcggagtgtccctgctcctgaaatcgtcgggccatttggccatgagggccgtgtcgcacaccatgctgatggtgt                                  <  4:114504‑M2/149‑105 (MQ=255)                                                                                                        aTGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAGGCATCGCACAGGCAGGCGAAAGGGGGCGATGCTGTCGGCCACCAGTACCCGTTCGAACGCGCCGCTGTCGaa                                 <  1:101696/148‑1 (MQ=255)                                                                                                         tGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAGGCATCGCACAGGCAGGCGAAAGGGGGCGATGCTGTCGGCCACCAGTACCCGTTCGAACGCGCCGCTGTCGAACa                               <  2:204662/149‑1 (MQ=255)                                                                                                           cgcCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGggcgcatgaccccggcgcaggtggcgccggcggagtgtccctgctcctgaaatcgtcgggccatttggccatgagggcc                                                           <  2:241803‑M2/119‑80 (MQ=255)                                                                                                           cgcCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGggcgcatgaccccggcgcaggtggcgccggcggagtgtccctgctcctgaaatcgtcgggccatttggccatgagggcc                                                           >  1:241803‑M2/1‑40 (MQ=255)                                                                                                           cgcCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAGGCATCGCACAGGCAGGCGAAAGGGGGCGATGCTGTCGGCCACCAGTACCCGTTCGACAGCGGCGCGTTCGAAcgg                              <  7:352192/148‑3 (MQ=255)                                                                                                            gcCAGGGCCCGAACGGTTGTCAAGCAGCTCAGCGACCAGggcgcatgaccccggcgcaggtggcgccggcggagtgtccctgctcctgaaatcgtcgggccatttggccatgagggccgtgtcgcacaccatgctgatggtgttcgcg                             <  4:247617‑M2/148‑110 (MQ=255)                                                                                                            gcCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAGGCATCGCACAGGCAGGCGAAAGGGGGCGATGCTGTCGGCCACCAGTACCCGTTCGAACGCGCCGCTGTCGAACAGCt                            >  5:123297/1‑149 (MQ=255)                                                                                                                      gAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAGGCATCGCACAGGCAGGCGAAAGGGGGCGATGCTGTCGGCCACCAGTACCCGTTCGAACGCGCCGCTGTCGAACAGCTCGCCACCggt                  >  4:142087/1‑149 (MQ=255)                                                                                                                      gAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAGGCATCGCACAGGCAGGCGAAAGGGGGCGATGCTGTCGGCCACCAGTACCCGTTCGAACGCGCCGCTGTCGAACAGCTCGCCACCggt                  >  4:147721/1‑149 (MQ=255)                                                                                                                           gTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAGGCATCGCACAGGCAGGCGAAAGGGGGCGATGCTGTCGGCCACCAGTa                                                          >  6:186198/1‑104 (MQ=255)                                                                                                                           gTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAGGCATCGCACAGGCAGGCGAAAGGGGGCGATGCTGTCGGCCACCAGTa                                                          <  5:186198/104‑1 (MQ=255)                                                                                                                            ttGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAGGCATCGCACAGGCAGGCGAAAGGGGGCGATGCTGTCGGCCACCAGTACCCGTTCGAACGCGCCGCTGTCGAACAGCTCGCCACCGGTGGTGaa            >  7:65222/1‑149 (MQ=255)                                                                                                                                 aaGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAGGCATCGCACAGGCAGGCGAAAGGGGGCGATGCTGTCGGCCACCAGTACCCGTTCGAACGCGCCGCTGTCGAACAGCTCGCCACCGGTGGTGAACAGGc       <  5:252975/149‑1 (MQ=255)                                                                                                                                      gcTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAGGCATCGCACAGGCAGGCGAAAGGGGGCGATGCTGTCGGCCACCAGTACCCGTTCGAACGCGCCGCTGTCGAACAGCTCGCCACCGGTGGTGAACAGGCCgtgg  <  4:37850/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                         GCGCGAACACCATCAGCATGGTGTGCGACACGGCCCTCATGGCCAAATGGCCCGACGATTTCAGGAGCAGGGACACTCCGCCGGCGCCACCTGCGCCGGGGTCATGCGCCAGGGCCCGAACGGTTGGCAAGCAGCTCGGCGACCAGGGCGCTGGTATCGACGATATCCAGTTGCTCCAGGCATCGCACAGGCAGGCGAAAGGGGGCGATGCTGTCGGCCACCAGTACCCGTTCGAACGCGCCGCTGTCGAACAGCTCGCCACCGGTGGTGAACAGGCCGTGG  >  NC_002947/3126364‑3126645

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.