| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5288423 | 20 (0.330) | 4 (0.090) | 4/204 | NT | 14.4% | intergenic (‑104/+80) | PP_4660/mdaB | LysR family transcriptional regulator/drug activity modulator B |
| ? | NC_002947 | = 5288457 | 32 (0.690) | intergenic (‑138/+46) | PP_4660/mdaB | LysR family transcriptional regulator/drug activity modulator B | |||||
GTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAGGTC > NC_002947/5288312‑5288602 | gTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgt > 2:171396‑M2/1‑146 (MQ=255)gTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgt > 2:165804‑M2/1‑146 (MQ=255)gTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgt > 7:212589‑M2/1‑146 (MQ=255) ttCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGTCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgg > 4:111362‑M2/1‑143 (MQ=255) gATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTTCCCCCAACCACAACTAAATCAAAGTACATGAAAACAGCGTAAAAACAGTTGGAGCGGGCCATCCCGCCAAGAAGCCCGTAAAGa > 2:277791/1‑148 (MQ=255) tCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCACGCCCGCGAAGACGCCGGTAAAGACA‑G‑AAAATTACTGTTCCt > 7:183298/1‑149 (MQ=38) gtgggagcgGGCAAGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGc > 5:30488/7‑142 (MQ=255) gtgggagcgGGCAAGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGc < 6:30488/136‑1 (MQ=255) ctgttCGGGGGCTTGCCCGCTCCCACAATTACTGAAAAGTCATTTAAACCTGCGTAATACCTGTGGTAGCGGGAAAGCCCGCGAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATaa < 1:277791/146‑1 (MQ=38) cgGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTAcc > 7:116338/1‑148 (MQ=255) gtcTTGCCCGGTCCTTCACCTTCTGCAAGTTCGTTGAAACCTGCGTAATACCTTTGGTAGGGGGAAAGCGCTCTAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTTCCAAc < 8:183298/147‑1 (MQ=255) gCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAAcg > 2:311109/1‑149 (MQ=255) ttGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAAcgcc > 4:188795/1‑149 (MQ=255) gCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCTGGAAAGCCCGCGAAGAGTCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCATCATAAGCTGCCAAcgccgc > 4:49805/1‑149 (MQ=255) cccGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgggagcgggcaagcccgcgaagaggcccatacaggcgccgctggacttggcctcgacaagcggttatctaatccttgcacagaccaaccacaggccctga < 2:306034‑M2/149‑104 (MQ=255) cccGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACgccgcc > 2:182505/1‑149 (MQ=255) ccGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCt < 7:107950/113‑1 (MQ=255) ccGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCt > 8:107950/1‑113 (MQ=255) ccGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGACCGCGAAGAGGCAGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCGCGTAAGCTGCCAccgccgccg > 8:276584/1‑149 (MQ=255) gCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgggagcgggcaagcccgcgaagaggcccatacaggcgccgccggacttggcctcgacaagcggttatctaatccttgcacagaccaaccacaggccctgatgt < 3:309816‑M2/149‑107 (MQ=255) gCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCgg > 6:185422/1‑148 (MQ=255) tCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgtgggagcgggcaagcccgcgaagaggcccatacaggcgccgctggacttggcctcgacaagcggttatctaatccttgcacagaccaaccacaggccctgatgtg < 4:342810‑M2/148‑108 (MQ=255) ccACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCTTg > 1:128357/1‑109 (MQ=255) ccACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCTTg < 2:128357/109‑1 (MQ=255) ccACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACAt > 3:78867/1‑149 (MQ=255) cTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGgcgc < 1:311109/148‑1 (MQ=255) cAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACAGTGAAAATTACTGTGCCTTGCCAAACACCATTTACAGATGGGCCTCATAAGCATCCAACGCCGCCGGCACATCCGGGCGCt > 1:118602/1‑148 (MQ=37) cAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTtc < 4:78867/148‑1 (MQ=255) aaaGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTtcat > 2:22183/1‑149 (MQ=255) aaGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTtcatc < 5:185422/149‑1 (MQ=255) tCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCgg < 5:114539/136‑1 (MQ=255) tCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCgg > 6:114539/1‑136 (MQ=255) ttGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCggg > 6:286193/1‑134 (MQ=255) ttGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCggg < 5:286193/134‑1 (MQ=255) ttGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATc > 6:94903/1‑148 (MQ=255) tGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACAcc > 3:301673/1‑78 (MQ=255) tGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACAcc < 4:301673/78‑1 (MQ=255) tAATACCtgtgggagcgggcaagcccgcgaagaggcccatacaggcgccgctggacttggcctcgacaagcggttatctaatccttgcacagaccaaccacaggccctgatgtgaaaacccgatccgaagaactccaggtattcgtcgc > 1:306034‑M2/1‑7 (MQ=255) tAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAg < 2:118602/149‑1 (MQ=255) aaTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAgg > 6:54376/1‑149 (MQ=255) tACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAGGTc < 1:182505/149‑1 (MQ=255) | GTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACA‑T‑AAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAGGTC > NC_002947/5288312‑5288602 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |