New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5387192 =	47 (0.780)	5 (0.090)	5/248	NT	10.5%	coding (702/2811 nt)	dld2	D‑lactate dehydrogenase
	?	NC_002947	5387230 =	41 (0.720)					coding (740/2811 nt)	dld2	D‑lactate dehydrogenase

GCCCGCCTGGGCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATACCGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCTGCTGCCGCGCGGTACCCGTGCTCAAGCAGCAGCCGGTCTCGGC  >  NC_002947/5387082‑5387377                                                                                                                                                     |                                                                                                                                                      gcagcagctttcaacgctggggaacaccagcagggcgctggccttgtgcgggtggtcgggcacggtgtcgtacgtgacggcgctgatgaagcccagcgtgccttcggagcCGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCgg                                                                                                                                                       >  8:332307‑M1/111‑149 (MQ=255)    gcatctttcaacgctgggtaacaccagcagggcgctggccttgtgcgggtggtcggtcacggtgtcgtacgtgacggcgctgatgaagcccagcgtgccttcggagcCGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTc                                                                                                                                                    >  6:278300‑M1/108‑149 (MQ=255)          ggCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATACCGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAgg                                                                                                                                              <  1:38888/149‑1 (MQ=255)            ccGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATACCGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCa                                                                                                                                            <  6:360437/149‑1 (MQ=255)                    cccGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATACCGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGc                                                                                                                                    <  5:182654/149‑1 (MQ=255)                      cgcgCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATACCGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCtt                                                                                                                                  >  3:341550/1‑149 (MQ=255)                        cgcCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATACCGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGTCATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTtca                                                                                                                                <  1:84707/149‑1 (MQ=255)                         gcCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATACCGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTtcat                                                                                                                               <  2:234326/149‑1 (MQ=255)                            aaCACCGCGCTGGCCGAGCGCATCCGGCACAAATACCGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGaa                                                                                                                                                <  8:315168/129‑1 (MQ=255)                            aaCACCGCGCTGGCCGAGCGCATCCGGCACAAATACCGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAg                                                                                                                            >  1:355316/1‑149 (MQ=255)                             acacCGCGCTGGCCGAGCGCATCCGGCACAAATACCGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAgc                                                                                                                           <  8:277518/149‑1 (MQ=255)                                                          aaaTACCGGCTGAAGAACACCACGCGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGa‑cca                                                                                             >  3:282881/1‑149 (MQ=255)                                                                   cTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCC‑CCCGcac                                                                                     >  3:302983/1‑147 (MQ=255)                                                                    tGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAg                                                                                  >  6:31882/1‑149 (MQ=255)                                                                    tGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCAGCACAAg                                                                                  >  2:132399/1‑149 (MQ=255)                                                                      aagaaCACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAg                                                                                  <  5:299247/147‑1 (MQ=255)                                                                       agaaCACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGc                                                                                >  7:291643/1‑148 (MQ=255)                                                                       agaaCACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGc                                                                                >  3:251046/1‑148 (MQ=255)                                                                              cacGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGccc                                                                        >  8:273614/1‑149 (MQ=255)                                                                                cGGGCCTTTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCctg                                                                      <  1:289944/149‑1 (MQ=255)                                                                                cGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCctg                                                                      <  7:63947/149‑1 (MQ=255)                                                                                   gCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCctgctg                                                                   <  4:341550/149‑1 (MQ=255)                                                                                   gCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCctgctg                                                                   >  8:242630/1‑149 (MQ=255)                                                                                     cTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGCTGgt                                                                 <  2:355316/149‑1 (MQ=255)                                                                                     cTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGCTGgt                                                                 <  8:144276/149‑1 (MQ=255)                                                                                      tGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGCTGgtg                                                                >  2:41443/1‑149 (MQ=255)                                                                                          aCTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGCTGGTGTTc                                                             <  3:117618/148‑1 (MQ=255)                                                                                             gAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGCTGGTGTTccc                                                           >  8:132790/1‑147 (MQ=255)                                                                                              aaCGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCa                                                         <  5:31882/148‑1 (MQ=255)                                                                                                 gCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGt                                                     >  6:188749/1‑149 (MQ=255)                                                                                                  cACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGtt                                                    <  7:132790/149‑1 (MQ=255)                                                                                                  cACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCCCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCAGCACAAGGCCAGCGCCCTGCTGGAGATCCCCAGcc                                                      >  8:323628/1‑146 (MQ=255)                                                                                                     tggtggACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGa                                                  >  5:299484/1‑148 (MQ=255)                                                                                                          gACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAgctg                                            >  5:143735/1‑149 (MQ=255)                                                                                                           gagccgaccagcaggtgctgcaggatgtccagcggctggtcgGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGACCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGCTGGTGTTACCCAGCGTTGAAAgatgc                                           >  6:278300‑M2/43‑149 (MQ=255)                                                                                                           aCTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAgctgc                                           >  1:97064/1‑149 (MQ=255)                                                                                                             tACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGCTGgtg                                                                >  7:87984/1‑126 (MQ=255)                                                                                                             tACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGCTGgtg                                                                <  8:87984/126‑1 (MQ=255)                                                                                                              ccgaccagcaggtgctgcaggatgtccagcggctggtcgGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCtgctgc                                        >  8:332307‑M2/40‑149 (MQ=255)                                                                                                               cgaccagcaggtgctgcaggatgtccagcggctggtcgGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCTGCTGcc                                       >  7:113752‑M2/39‑149 (MQ=255)                                                                                                               CGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCTGCTGcc                                       >  6:299484‑M1/1‑149 (MQ=255)                                                                                                                gaccagcaggtgctgcaggatgtccagcggctggtcgGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCTGCTGCcg                                      >  2:366359‑M2/38‑149 (MQ=255)                                                                                                                gACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACTGTGGGGGGCCCGAGGGAGCCCGCACAAGCCCAGCCCCCTGCTGGTGTTCCCCAGCGTTGAAAGAtgctgc                                        >  1:123465/1‑149 (MQ=255)                                                                                                                   CAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGGTACTGCcgcgc                                   <  1:131093‑M1/149‑1 (MQ=255)                                                                                                                    AGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCTGCTGCcgcgcg                                  <  1:254574‑M1/149‑1 (MQ=255)                                                                                                                        gCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCa                                                                                                                    >  2:70056/1‑65 (MQ=255)                                                                                                                        gCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCa                                                                                                                    <  1:70056/65‑1 (MQ=255)                                                                                                                        gCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCTGCTGCCGCGCGGTAc                              <  2:131093/149‑1 (MQ=255)                                                                                                                            gACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCTGCTGCCGCGCGGTACCCGt                          <  2:254574/149‑1 (MQ=255)                                                                                                                              cATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCTGCTGCCGCGCGGTACCCGTGc                        >  3:34214/1‑149 (MQ=255)                                                                                                                                   atgtccagcggctggtggGATCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGATGGTGTTCCCCAGCGTTGAAAGCTGCTGCCGCGCGGTACCCGTGCTCaa                    <  5:278300‑M2/130‑1 (MQ=255)                                                                                                                                            ggctggtcgGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCTGCTGCCGCGCGGTACCCGTGCTCAAGCAGCAGCCg          <  7:332307‑M2/140‑1 (MQ=255)                                                                                                                                              ctggtcgGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCTGCTGCCGCGCGGTACCCGTGCTCAAGCAGCAGCCGGt        <  1:366359‑M2/142‑1 (MQ=255)                                                                                                                                                 gtcgGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCTGCTGCCGCGCGGTACCCGTGCTCAAGCAGCAGCCGGtctc     >  6:34569‑M2/5‑149 (MQ=255)                                                                                                                                                    gGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCTGCTGCCGCGCGGTACCCGTGCTCAAGCAGCAGCCGGTCTCGGc  >  2:132417‑M2/2‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                      GCCCGCCTGGGCCGCGAAACCCGCGCCAACACCGCGCTGGCCGAGCGCATCCGGCACAAATACCGGCTGAAGAACACCACGGGCCTGTCACTGAACGCACTGGTGGACTACGACCAGCCGCTGGACATCCTGCAGCACCTGCTGGTCGGCTCCGAAGGCACGCTGGGCTTCATCAGCGCCGTCACGTACGACACCGTGCCCGA‑CCA‑CCCGCACAAGGCCAGCGCCCTGCTGGTGTTCCCCAGCGTTGAAAGCTGCTGCCGCGCGGTACCCGTGCTCAAGCAGCAGCCGGTCTCGGC  >  NC_002947/5387082‑5387377

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.