New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6062972	76 (1.260)	4 (0.070)	4/254	NT	5.5%	intergenic (‑85/‑140)	rubA/ubiC	rubredoxin‑1/chorismate pyruvate‑lyase
	?	NC_002947	= 6063004	65 (1.120)					intergenic (‑117/‑108)	rubA/ubiC	rubredoxin‑1/chorismate pyruvate‑lyase

CCACAGACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACGTGTCGTACGAATCCCCGCAAGCAGCCGCTGTCGCGTG  >  NC_002947/6062859‑6063149                                                                                                                                                  |                                                                                                                                                   ccACAGACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAgcg                                                                                                                                                 <  6:288772‑M2/149‑4 (MQ=255)  cacaGACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAgcgc                                                                                                                                                >  5:288772‑M2/1‑145 (MQ=255)     aGACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAgcgcgc                                                                                                                                              >  2:367037/1‑148 (MQ=255)      gACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCaa                                                                                                                                            <  1:27877/149‑1 (MQ=255)        cAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATg                                                                                                                                          >  4:53753/1‑149 (MQ=255)           tACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCACAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGt                                                                                                                                       >  6:177642/1‑149 (MQ=255)             cATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTgg                                                                                                                                     <  2:231168/149‑1 (MQ=255)              aTTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTggg                                                                                                                                    >  5:198567/1‑149 (MQ=255)              aTTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTggg                                                                                                                                    <  6:198567/149‑1 (MQ=255)                  ccACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCt                                                                                                                                <  8:55338/149‑1 (MQ=255)                    aCTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGACCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCtt‑t                                                                                                                             >  6:85031/1‑149 (MQ=255)                            atcaGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCgg                                                                                                                      <  3:53753/148‑1 (MQ=255)                            atcaGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGc                                                                                                                     >  6:270454/1‑149 (MQ=255)                            atcaGGTCTATTTCCTCGGTTCAGGCTGGGGCGTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGc                                                                                                                     <  4:158363/149‑1 (MQ=255)                             tgaGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGCCCGCGCAGGCCTGGCGGGCTGGCCCGCGCGCAGGGCGAGCGCGGAATGCGGGGGGGCTG‑TGTAGCGGcc                                                                                                                    >  4:60679/3‑149 (MQ=255)                                  tCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTgcc                                                                                                               <  4:132511/149‑1 (MQ=255)                                    tATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTgccgc                                                                                                             >  2:12386/1‑149 (MQ=255)                                          cTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTa                                                                                                        <  6:155925/148‑1 (MQ=255)                                          cTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTAt                                                                                                       <  5:95855/149‑1 (MQ=255)                                           tCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATg                                                                                                      >  6:306581/1‑149 (MQ=255)                                           tCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATg                                                                                                      >  7:329071/1‑149 (MQ=255)                                              gTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCaa                                                                                                   <  5:15545/149‑1 (MQ=255)                                                  aGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAg                                                                                               >  3:120846/1‑149 (MQ=255)                                                    gCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGtt                                                                                             >  2:333484/1‑149 (MQ=255)                                                        gggCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTgggg                                                                                         <  3:60679/149‑1 (MQ=255)                                                        gggCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTgggg                                                                                         >  1:100926/1‑149 (MQ=255)                                                        gggCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTgggg                                                                                         >  6:343457/1‑149 (MQ=255)                                                        gggCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTgg                                                                                           <  5:359242/147‑1 (MQ=255)                                                        gggCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCACAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTggg                                                                                          <  5:177642/148‑1 (MQ=255)                                                         ggCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGc                                                                                        <  5:270454/149‑1 (MQ=255)                                                           cTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCaa                                                                                      >  6:43189/1‑149 (MQ=255)                                                                gtTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCa                                                                                                           <  2:131466/123‑1 (MQ=255)                                                                gtTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATg                                                                                 >  5:189309/1‑149 (MQ=255)                                                                 ttGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCATGGCGGGCTTGCCCGCGCACAGGGCAAGCGCGCAATGGGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATg                                                                                 <  5:85031/148‑1 (MQ=255)                                                                   gctgctGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCt                                                                               >  6:332876/1‑148 (MQ=255)                                                                     tgctgATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGc                                                                                                                     >  6:75276/1‑108 (MQ=255)                                                                     tgctgATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGc                                                                                                                     <  5:75276/108‑1 (MQ=255)                                                                        tgATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTc                                                                         >  5:53977/1‑149 (MQ=255)                                                                        tgATGGCCTCTTCGCGGGCAAACCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTc                                                                         >  3:241072/1‑149 (MQ=255)                                                                          aTGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTcgc                                                                       <  5:46496/149‑1 (MQ=255)                                                                             gCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTcgccgc                                                                    >  2:159587/1‑149 (MQ=255)                                                                                     gcgGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTCGCCGCCTCTCTgg                                                            <  1:9600/149‑1 (MQ=255)                                                                                       gggCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTCGCCGCCTCTCTGGCt                                                          <  6:189309/149‑1 (MQ=255)                                                                                         gCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTCGCCGCCTCTCTGGCTGt                                                        <  5:332876/149‑1 (MQ=255)                                                                                              ccGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTCGCCGCCTCTCTGGCTGTAACa                                                    >  4:124320/1‑148 (MQ=255)                                                                                               cGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTCGCCGCCTCTCTGGCTGTAACaaa                                                  <  2:100926/149‑1 (MQ=255)                                                                                               cGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTCGCCGCCTCTCTGGCTGTAACaaa                                                  <  1:367037/149‑1 (MQ=255)                                                                                                 cTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGACCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGc                                                <  4:323385/149‑1 (MQ=255)                                                                                                  tCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTaa                                                                             >  6:197556/1‑119 (MQ=255)                                                                                                  tCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTaa                                                                             <  5:197556/119‑1 (MQ=255)                                                                                                  tCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCa                                               <  8:329071/149‑1 (MQ=255)                                                                                                    cTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATa                                             <  1:147710/149‑1 (MQ=255)                                                                                                     tACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAATCAGTTGGGGCAATCATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATAc                                            >  8:269096/1‑149 (MQ=255)                                                                                                     tACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATAc                                            <  4:120846/149‑1 (MQ=255)                                                                                                          tGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAgcgcggtcactgtaggagcggcttgcccgcgaagaggccatcagcagcaacacaagccccagcctgaaccgaggaaatagacctgatgaaaaagtggcaatgtattgt                                        <  5:135714‑M2/149‑109 (MQ=255)                                                                                                            aCCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACgtg                                     >  5:174784/1‑149 (MQ=255)                                                                                                            aCCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACgt                                      <  5:306581/148‑1 (MQ=255)                                                                                                            aCCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACgt                                      <  3:124320/148‑1 (MQ=255)                                                                                                              cgcgCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAgcgcggtcactgtaggagcggcttgcccgcgaagaggccatcagcagcaacacaagccccagcctgaaccgaggaaatagacctgatgaaaaagtggcaatgtattgtctgt                                    <  4:182905‑M2/149‑113 (MQ=255)                                                                                                               gcgcAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAgcgcggtcactgtaggagcggcttgcccgcgaagaggccatcagcagcaacacaagccccagcctgaaccgaggaaatagacctgatgaaaaagtggcaatgtattgtctgtg                                   >  6:135714‑M2/1‑36 (MQ=255)                                                                                                                     gCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCa                                               <  5:278246/130‑1 (MQ=255)                                                                                                                     gCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCa                                               >  6:278246/1‑130 (MQ=255)                                                                                                                     gCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACGTGTCGTACGaa                            >  1:296154/1‑149 (MQ=255)                                                                                                                     gCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACGTGTCGTACGaa                            >  7:343231/1‑149 (MQ=255)                                                                                                                                   cccGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTgg                                                                                           <  5:278733/72‑1 (MQ=255)                                                                                                                                   cccGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTgg                                                                                           >  6:278733/1‑72 (MQ=255)                                                                                                                                    ccGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTTGTGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACGTGTCGTACGAATCCCCGCAagcagc              >  1:62791/1‑149 (MQ=255)                                                                                                                                    ccGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTCGCCGCctct                                                                >  7:214160/1‑98 (MQ=255)                                                                                                                                    ccGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTCGCCGCctct                                                                <  8:214160/98‑1 (MQ=255)                                                                                                                                    ccGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACGTGTCGTACGAATCCCCGCAAGCAGcc             >  4:172047/1‑149 (MQ=255)                                                                                                                                    ccGCGCACAGGGCCAGCGCGCAATGCGTGGGGGATT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACGTGTCGTACGAATCCCCGCAAGCAGcc             >  7:237842/1‑149 (MQ=255)                                                                                                                                     cgcgCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACGTGTCGTACGAATCCCCGCAAGCAGcca            >  4:366176/1‑148 (MQ=255)                                                                                                                                     cgcgCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACGTGTCGTACGAATCCCCGCAAGCAGCCg            <  8:343231/149‑1 (MQ=255)                                                                                                                                             gggCCAgcgcggtcactgtaggagcggcttgcccgcgaagaggccatcagcagcaacacaagccccagcctgaaccgaggaaatagacctgatgaaaaagtggcaatgtattgtctgtggcctgatctacgacgaagccgaaggctggc     <  1:161065‑M2/149‑144 (MQ=255)                                                                                                                                               gCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTCGCCGCCTATCTGGCTGTAACAAAGCATACCGACGTGTCGTACGAATCCCCGCAAGCAGCCGCTGTCGCGTg  <  5:343457/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                   CCACAGACAATACATTGCCACTTTTTCATCAGGTCTATTTCCTCGGTTCAGGCTGGGGCTTGTGTTGCTGCTGATGGCCTCTTCGCGGGCAAGCCGCTCCTACAGTGACCGCGCAGGCCTGGCGGGCTTGCCCGCGCACAGGGCCAGCGCGCAATGCGTGGGGGCTT‑TGTAGCGGCCCTGCCGCCAGTATGCAAGCAGTTGGGGCAATCATGCTAAGCTCGCCGCCTCTCTGGCTGTAACAAAGCATACCGACGTGTCGTACGAATCCCCGCAAGCAGCCGCTGTCGCGTG  >  NC_002947/6062859‑6063149

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.