| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,156,141 | A→T | 11.0% | L217* (TTA→TAA) | PP_3659 ← | transcriptional regulator, AraC family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,156,141 | 0 | A | T | 11.0% | 189.9 / 13.5 | 80 | L217* (TTA→TAA) | PP_3659 | transcriptional regulator, AraC family |
| Reads supporting (aligned to +/- strand): ref base A (37/34); new base T (6/3); total (43/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.94e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.12e-01 | |||||||||||
GGAACTGGACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTGAGGA > NC_002947/4155996‑4156284 | ggAACTGGACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTtaa > 1:241896/1‑148 (MQ=255) gAACTGGACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTaaaaa < 4:173623/149‑1 (MQ=255) gACATGCTCAAGTCTCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTTAAAAGGCac < 8:41416/148‑2 (MQ=255) gACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCa < 8:241686/147‑1 (MQ=255) gACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAg > 7:256702/1‑148 (MQ=255) gACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAg > 5:241109/1‑148 (MQ=255) cATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACTTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGCCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGaa < 3:8835/149‑1 (MQ=255) cATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGaa < 4:20201/149‑1 (MQ=255) tGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTTAAAAGGCacgccaa < 2:241896/149‑7 (MQ=255) tGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCCTGCCTTTTTAAAAGGCacgccaa < 3:337568/149‑7 (MQ=255) tCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAgaga > 4:7624/1‑148 (MQ=255) aaGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGaaa < 3:7624/148‑1 (MQ=255) gTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGCATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACgg > 6:109724/1‑149 (MQ=255) gcgGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGTAGAGAGCAGTTTTAATCGCAGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTGTTAAAAAGGCAGGAAGAGAAACGGGCg > 8:223760/1‑149 (MQ=255) gggCGAGCTCATCGAGTTCAGGCCACGGGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGtt < 3:7579/149‑1 (MQ=255) ggCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGttt < 2:209817/149‑1 (MQ=255) gCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTg > 5:175995/1‑149 (MQ=255) gCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCa > 5:112730/1‑148 (MQ=255) tCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCTTTTGGCaaa > 4:49103/1‑148 (MQ=255) tCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCaaa > 3:18124/1‑148 (MQ=255) aTCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCt > 3:253907/1‑149 (MQ=255) aTCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCt > 1:277022/1‑149 (MQ=255) tCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTAATTGTCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGTAGTTTGGCAAAACtt > 5:191940/1‑149 (MQ=255) aGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGc > 2:291137/1‑147 (MQ=255) aGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCa < 4:253907/149‑1 (MQ=255) ggCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAg < 3:327063/149‑1 (MQ=255) gCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAg > 4:34703/1‑148 (MQ=255) ggAGAGAGAAGTTTTAATCGCCGCAGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGCGCGTTTGGCAAAACTTGTACGCCAGAAACCtcttc > 7:140281/1‑147 (MQ=255) gagagaGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTtctc > 1:159362/1‑148 (MQ=255) gagCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACGTTGTACGCCAGAAAGCTCTTCTCGAaca < 5:374066/149‑1 (MQ=255) cAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAg < 8:106576/149‑1 (MQ=255) gTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCg < 2:159362/149‑1 (MQ=255) ttttAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAgag > 7:278573/1‑146 (MQ=255) ttttAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCg > 6:286934/1‑148 (MQ=255) ttttAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCAAAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACAAAgag > 6:127064/1‑146 (MQ=255) aTCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCGGAAAGCTCTTCTCGAACACAGCGGAGGtt > 3:287230/1‑149 (MQ=255) aTCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGt > 8:29960/1‑148 (MQ=255) ccgccgGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTAt < 8:217454/149‑1 (MQ=255) ccgGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCgg > 7:247148/1‑149 (MQ=255) ccgCATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCgg < 5:109724/149‑1 (MQ=255) aTCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGcc < 6:241109/147‑1 (MQ=255) tCATAATGCTGGTACTGTCGTCGTTACGGTATTTCACAAGTAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGTAAGCTCTTCTCGAACACAGCGGAGGTTCGATCGGCCCTc < 2:5805/149‑1 (MQ=255) aaTGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACt > 1:198849/1‑149 (MQ=255) aaTGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACt > 5:85614/1‑149 (MQ=255) cTCGTACTGTCGTCGTTTCGGTATTTCACAAGGATGTTACTTGGCGTGCGTTTTAAAAAGGCAGGATGAGTAACGGGCTTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACAGAGCGGAGGTTCTATCGGCCCTCCACTCGAt < 8:140281/149‑1 (MQ=255) cTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGa < 2:198849/148‑1 (MQ=255) tCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGAtt > 3:30608/1‑149 (MQ=255) tCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGAtt > 7:8457/1‑149 (MQ=255) tCGTACTGTCGTCGTTACGCTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGAtt > 2:6547/1‑149 (MQ=255) tACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCGGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTcc < 4:287230/149‑1 (MQ=255) tcgtcgTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTAc < 6:137847/87‑1 (MQ=255) tcgtcgTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTAc > 5:137847/1‑87 (MQ=255) tcgtcgTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTcac > 1:235868/1‑148 (MQ=255) tcgtcgTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTca < 6:85614/147‑1 (MQ=255) tcgtTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCtt > 6:150201/1‑80 (MQ=255) ttACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAgcg > 8:214418/1‑149 (MQ=255) aCGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCg < 4:350704/118‑1 (MQ=255) aCGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCa > 8:261146/1‑149 (MQ=255) cGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCa < 3:49103/148‑1 (MQ=255) ggTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCAtt > 4:258291/1‑149 (MQ=255) gTATTTCACAATGTAGTTACTTGGGGTGCCTTTTAAAAAGGCAGTAAGAGAATCGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAAAACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTc < 8:256702/149‑1 (MQ=255) tCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGATGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATa < 7:223760/148‑1 (MQ=255) acaAGGAAGTTACTTGGCGTGCCTTTTAAAAAGTCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTc < 6:112730/149‑1 (MQ=255) aaGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGc > 7:46138/1‑149 (MQ=255) aGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCt < 4:18124/149‑1 (MQ=255) gTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTgtcgt > 5:45954/1‑149 (MQ=255) ttGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCAcc > 7:54103/1‑149 (MQ=255) ttcctGCCTTTTTAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCGTCCACTCGATTTCCGCACAAAAGCGCATTCGATAGTCGCTGTCGTCCAGCgg > 2:164114/5‑149 (MQ=255) ttcctGCCTTTTTAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCgg > 4:77185/5‑149 (MQ=255) gCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTc > 7:274581/1‑112 (MQ=255) gCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTc < 8:274581/112‑1 (MQ=255) gCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCgg < 2:277022/148‑1 (MQ=255) cctGCCTTTTTAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTACACTCGATTTCCTCCCAAAAGCGCATTCGATAGTCTCTGTCGTCCACCGGCt > 8:155762/3‑149 (MQ=255) cGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCt < 7:261146/149‑1 (MQ=255) agTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACATTGTACGCAAGAAAGCTCTTCTCGAACACAGAGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCAAAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCt < 8:278573/148‑1 (MQ=255) ctGCCTTTTTAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACGCAGCGGAGGTTCTATCGGCCCTCGACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTg > 8:240101/2‑149 (MQ=255) ctGCCTTTTTAAAAGGCAGGAAGAAAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCt > 8:134703/2‑148 (MQ=255) ctccTTTTAATAACGCTGGAAGAGATACGTGGGTTTGGCAAACGTTGTACGCCAGATATTTCTTATCTATCACTGCGGATTTTCTATCGGCCCTCCACTCGATTTCGTGTCAATAGCCTATTGGATAGTCGCTGTGGTCGACCTGCTga < 4:311511/147‑1 (MQ=255) gCCTTTTTAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTgag > 7:99422/1‑149 (MQ=255) cTTTTAAAAAGTCATGAAGAGAAACGGGCGTTTGGCAAAACTTGTACGCCAGATAGCTCTTCTCGAACACATCGGAGGTTCTATCTGCCCTACACTCGATTTCCTGACAAAAGCTCATTGGATAGTCGCTGTCGTCCACCGGCTgagg < 6:191940/148‑1 (MQ=255) cTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTgagga < 7:263286/149‑1 (MQ=255) cTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTgagga < 1:291137/149‑1 (MQ=255) | GGAACTGGACATGCTCAAGTCGCGGGCGAGCTCATCGAGTTCAGGCCACGTGTGTGGAGAGAGCAGTTTTAATCGCCGCCGGATCATAATGCTCGTACTGTCGTCGTTACGGTATTTCACAAGGAAGTTACTTGGCGTGCCTTTTAAAAAGGCAGGAAGAGAAACGGGCGTTTGGCAAACCTTGTACGCCAGAAAGCTCTTCTCGAACACAGCGGAGGTTCTATCGGCCCTCCACTCGATTTCCTCACAAAAGCGCATTCGATAGTCGCTGTCGTCCACCGGCTGAGGA > NC_002947/4155996‑4156284 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |