| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,191,400 | G→C | 10.3% | intergenic (‑732/‑425) | PP_5612 ← / → PP_5613 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,191,400 | 0 | G | C | 10.3% | 186.6 / 9.7 | 66 | intergenic (‑732/‑425) | PP_5612/PP_5613 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (28/31); new base C (2/5); total (30/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.42e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.55e-01 | |||||||||||
GCGCCCTTACGGGGCGGCTGTCGTAAACCGAGCCCGCCTGGGGCAGGTCTCGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGC > NC_002947/4191259‑4191547 | gcgcCCTTACGGGGCGGCTGTCGTAAACCGAGCCCGCCTGGGGCAGGTCTCGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGaagcaag < 5:193836/142‑1 (MQ=255)gcgcCCTTACGGGGCGGCTGTCGTAAACCGAGCCCGCCTGGGGCAGGTCTCGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGaagcaag > 6:193836/1‑142 (MQ=255)gcgcCCTTACGGGGCGGCTGTCGTAAACCGAGCCCGCCTGGGGCAGGTCTCGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAATCAACCTGATcg > 6:8300/1‑148 (MQ=255)gcgcCCTTACGGGGCGGCTGTCGTAAACCGAGCCCGCCTGGGGCAGGTCTCGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGAt > 6:130608/1‑147 (MQ=255) cccTTACGGGGCGGCTGTCGTAAACCGAGCCCGCCTGGGGCAGGTCTCGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAATCAACCTGATcggct < 3:131353/149‑5 (MQ=255) ccTTACGGGGCGGCTGTCGTAAACCGAGCCCGCCTGGGGCAGGTCTCGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGtt > 4:111953/1‑149 (MQ=255) ttACGGGGCGGCTGTCGTAAACCGAGCCCGCCTGGGGCAGGTCTCGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGa > 4:348091/1‑149 (MQ=255) gcggcTGTCGTAAACCGAGCCCGCCTGGGGCAGGTCTCGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAATCAACCTGATCGGCTTGCTtcatca < 5:72250/149‑1 (MQ=38) gcggcTGTCGTAAACCGAGCCCGCCTGGGGCAGGTCTCGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATtcatca < 1:117213/149‑1 (MQ=255) cggcTGTCGTAAACCGAGCCCGCCTGGGGCAGGTCTCGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAATCAACCTGATCGGCTTGCTtcatcag < 8:300414/149‑2 (MQ=38) cggcTGTCGTAAACCGAGCCCGCCTGGGGCAGGTCTCGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAATCAACCTGATCGGCTTGCTtcatcag < 7:75699/149‑2 (MQ=38) ggcTGTCGTAAACCGAGCCCGCCTGGGGCAGGTCTCGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAATCAACCTGATCGGCTTGCTtcatcagg < 5:8300/149‑3 (MQ=38) ggcTGTCGTAAACCGAGCCCGCCTGGGGCAGGTCTCGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATcaca < 3:274406/149‑1 (MQ=255) tGTCGTAAACCGAGCCCGCCTGGGGCAGGTCTCGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATcacac > 3:4175/1‑147 (MQ=255) tCGTAAACCGAGCCCGCCTGGGGCAGGTCTCGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAagg > 5:20757/1‑149 (MQ=255) gTAAACCGAGCCCGCCTGGGGCAGGTCTCGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAaggag < 5:78818/149‑1 (MQ=255) tAAACCGAGCCCGCCTGGGGCAGGTCTCGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAaggagg < 3:111953/149‑1 (MQ=255) aaCCGAGCCCGCCTGGGGCAGGTCTCGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAggg > 5:350751/1‑148 (MQ=255) ccGAGCCCGCCTGGGGCAGGTCTCGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATtcat > 3:288243/1‑133 (MQ=255) ccGAGCCCGCCTGGGGCAGGTCTCGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATtcat < 4:288243/133‑1 (MQ=255) ccGCCTGGGGCAGGTCTCGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGccc > 1:32798/1‑149 (MQ=255) ccGCCTGGGGCAGGTCTCGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGccc > 7:195902/1‑149 (MQ=255) gggCAGGTCTCGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTg < 3:215298/149‑1 (MQ=255) ggCAGGTCTCGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTgg < 4:3908/149‑1 (MQ=255) ggCAGGTCTCGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTgg < 7:104326/149‑1 (MQ=255) ggCAGGTCTCGGCCCTTCGGGCGACCATCCCCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCTAGCCGATCAGGTTGATTCATCACACAAGCAGGGCATCCGCCCCCCCTTgg < 1:2817/149‑1 (MQ=255) aGGTCTCGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTc > 8:17406/1‑149 (MQ=255) gTCTCGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGa < 6:48135/149‑1 (MQ=255) tctcGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGAc < 3:348091/149‑1 (MQ=255) tcGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCt > 7:169258/1‑149 (MQ=255) ggCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGc < 5:130608/149‑1 (MQ=255) cccTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTCGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAATCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCa < 2:342287/149‑1 (MQ=255) ccTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCAc > 3:319987/1‑149 (MQ=255) gggCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGc < 7:171408/148‑1 (MQ=255) gCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGAc < 5:237026/135‑1 (MQ=255) gCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGAc > 6:237026/1‑135 (MQ=255) cATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTg < 6:20757/149‑1 (MQ=255) tctcGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTcccaggcc > 7:139993/1‑141 (MQ=255) tctcGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCt > 4:235462/1‑149 (MQ=255) tctcGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCt > 3:298817/1‑149 (MQ=255) tctcGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCt > 6:137857/1‑149 (MQ=255) tcGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGc < 1:179378/127‑1 (MQ=255) tcGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGc > 2:179378/1‑127 (MQ=255) tcGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGa > 8:18461/1‑149 (MQ=255) tGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATCAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGctc > 1:336398/1‑149 (MQ=255) gcgcgcTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCt < 8:269420/135‑1 (MQ=255) cgcgcTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGctc < 2:32798/147‑1 (MQ=255) cgcgcTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGctc < 6:350751/147‑1 (MQ=255) cgcgcTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAACGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGctct < 2:101414/148‑1 (MQ=255) cGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCtt > 7:138251/1‑148 (MQ=255) aaGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATAAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGcc < 8:295887/149‑1 (MQ=255) ttGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCaaa < 7:17406/149‑1 (MQ=255) ggTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCaaa < 8:169258/147‑1 (MQ=255) ggTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCaaa < 4:319987/147‑1 (MQ=255) ggTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAg < 7:18461/148‑1 (MQ=255) gTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTc > 7:314655/1‑149 (MQ=255) tCGCCGGAGACGTCAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCctct < 7:342270/148‑1 (MQ=255) tCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCAATTGCGACCCCTGGCGCTGATGATCTTCATCTTTACCAGCACGCCCAAAGTCcact > 4:143632/1‑148 (MQ=255) cGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTAc > 4:152273/1‑127 (MQ=255) cGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTAc < 3:152273/127‑1 (MQ=255) gCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGt < 8:314655/148‑1 (MQ=255) gCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTc < 4:4175/149‑1 (MQ=255) ccGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCACCTGGCGCTGATGCTCTTCATCTTTACAAGCACGCCCAAAGTACTCTGTc > 6:287374/1‑148 (MQ=255) cGGAGACGACAGAGCCTGATGAAGCAAGCCGAACAGGTTGATTCATCACACAAGGAGGGCATCAGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGACa > 5:129976/1‑148 (MQ=255) ggAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCaaa < 5:137857/149‑1 (MQ=255) gagCCTGATGAAGCAACCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTCCCACTTGCCTCCCCTGGCCCACATGCTCTTCATATTTACCACCACGCCCAAAGACAACTCACAACCCTACGaaag > 4:337781/1‑147 (MQ=255) atgaAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAAt > 5:63737/1‑149 (MQ=255) atgaAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAAt > 1:28991/1‑149 (MQ=255) aagcaagcCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCCCGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCt > 1:296025/1‑149 (MQ=255) aagcaagcCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCt > 3:223478/1‑149 (MQ=255) aagcCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAgg > 3:70519/1‑149 (MQ=255) agcCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTAc < 4:135390/129‑1 (MQ=255) agcCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTAc > 3:135390/1‑129 (MQ=255) agcCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGc > 8:244324/1‑149 (MQ=255) | GCGCCCTTACGGGGCGGCTGTCGTAAACCGAGCCCGCCTGGGGCAGGTCTCGGCCCTTCGGGCGACCATCCTCTCGCCTGCGCGCTCCGCTTGCGTCGAAGCTTGGTAGTTCGCCGGAGACGACAGAGCCTGATGAAGCAAGCCGATCAGGTTGATTCATCACACAAGGAGGGCATCCGCCCCCCCTTGGGTCGACCTGCCACTTGCGTCCCCTGGCGCTGATGCTCTTCATCTTTACCAGCACGCCCAAAGTCCTCTGTCAAACCTACGAACGCCGAAATGCTGAGGC > NC_002947/4191259‑4191547 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |