Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 4,382,821 | G→A | 9.4% | intergenic (‑32/+230) | PP_3857 ← / ← PP_3858 | hypothetical protein/tail fiber protein |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 4,382,821 | 0 | G | A | 9.4% | 168.4 / 5.3 | 63 | intergenic (‑32/+230) | PP_3857/PP_3858 | hypothetical protein/tail fiber protein |
Reads supporting (aligned to +/- strand): ref base G (32/25); new base A (4/2); total (36/27) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 6.93e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.19e-01 |
GTATCGACACCGCCGTTGACATAGACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAG > NC_002947/4382677‑4382964 | gTATCGACACCGCCGTTGACATAGACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGc > 2:217637/1‑149 (MQ=255) acCGCCGTTGACATAGACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTgg < 6:160710/149‑1 (MQ=255) cgccgTTGACATAGACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGt > 4:99295/1‑149 (MQ=255) cgTTGACATAGACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCACGGCGGGttttttgatg < 8:249894/149‑8 (MQ=255) ttGACATAGACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAAc < 2:310071/149‑1 (MQ=255) gACATAGACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGa > 7:199148/1‑149 (MQ=255) aTAGACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGAttt > 6:173191/1‑149 (MQ=255) aTAGACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTCGGGTCAAACGAttt < 7:319549/149‑1 (MQ=255) aGACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGttt > 8:304004/1‑133 (MQ=255) aGACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGttt < 7:304004/133‑1 (MQ=255) gACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGa < 2:372440/148‑1 (MQ=255) gACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGa < 5:187718/148‑1 (MQ=255) aCATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAg > 5:53159/1‑148 (MQ=255) cATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAg > 3:278085/1‑147 (MQ=255) gcAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCg > 2:120394/1‑149 (MQ=255) cAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTc < 3:31559/147‑1 (MQ=255) gCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACGCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTa < 3:923/149‑1 (MQ=255) ctctTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGct > 1:192/1‑149 (MQ=255) tctTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGctc > 2:103682/1‑149 (MQ=255) tctTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCACGGCGGGttttt < 6:201015/111‑3 (MQ=255) tctTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCACGGCGGGttttt > 5:201015/1‑109 (MQ=255) tattcgATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCAAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACgat > 6:289189/6‑146 (MQ=255) tGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGACTCGTTACGCGT‑CACGCTCTAc > 8:235295/1‑149 (MQ=255) gATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑gg > 7:182127/1‑149 (MQ=255) attgcattgcCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTAATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGAGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGc > 5:164846/1‑149 (MQ=255) cattgcCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGAtt < 8:182127/149‑1 (MQ=255) cattgcCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGAtt < 4:45066/149‑1 (MQ=255) cattgcCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGAtt < 8:199148/149‑1 (MQ=255) cattgcCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGAtt < 8:27841/149‑1 (MQ=255) cattgcCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGACCACCCTCCTTACGCGT‑CACGCTCTAC‑GGCGAtt > 2:278071/1‑149 (MQ=255) ttgcCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTgg < 3:99295/149‑1 (MQ=255) gcCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGAt > 7:86634/1‑149 (MQ=255) cTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCGcc < 4:341678/149‑1 (MQ=255) cTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCGc > 3:154152/1‑148 (MQ=255) cTTCGGACAACAGGCCTGAATAGGCTACCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCACGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCGc > 8:31775/1‑148 (MQ=255) cGGACAACAGGCCTGAATAGGCTTCCAACGCTGAACAATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCGCCa < 8:340495/147‑1 (MQ=255) gACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCGCCAGca > 5:90934/1‑148 (MQ=255) gACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCGCCAGca > 8:49835/1‑148 (MQ=255) aacaGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCGCCAGcatcat > 3:179887/1‑149 (MQ=255) ggCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGt < 5:173191/149‑1 (MQ=255) gCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGtt > 7:344657/1‑149 (MQ=255) gCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGtt > 4:14148/1‑149 (MQ=255) ccAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAATACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CTCGCTCTAC‑GGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTAc < 3:208806/148‑1 (MQ=255) aaaGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCAt > 5:103137/1‑149 (MQ=255) tGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCACCAGCATCATCGGCGGCGAGCTGTTTACCATTACg > 4:128243/1‑148 (MQ=255) aGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGTGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTca > 6:15892/1‑149 (MQ=255) aGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTc < 8:86634/148‑1 (MQ=255) cATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTACGGGAGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTcat < 1:103682/148‑1 (MQ=255) aCTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCa < 6:90934/148‑1 (MQ=255) ttttCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCCTCCATCAATg > 8:208135/1‑149 (MQ=255) tcCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCa > 6:148344/1‑149 (MQ=255) cAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTc < 7:49835/146‑1 (MQ=255) gCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACg > 8:224904/1‑149 (MQ=255) gCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACg > 5:97620/1‑149 (MQ=255) gCATCAAAAAACCAGCAGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGATCGTTACGCGG‑CACGCTCTAC‑GGCGATTGGATCGACAGAATCATCGGCGGCGAGCTGTTTAACATTACGCAAAACGTCATGCATCAATGCTTCATGCCg > 4:270612/1‑149 (MQ=255) cATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGc < 2:53152/149‑1 (MQ=255) aTCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCt > 1:284795/1‑149 (MQ=255) ccaaaCCCGCCACGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGTGCACGCTCTAC‑GGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTG‑TTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCAtt > 1:293186/3‑149 (MQ=255) ccaaaCCCGCCACGGCGGGGTTGGGTCAAACGATTTGCGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCGCCAGCAGCATCGGCGGCCAGCTGTGTAGCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCAt > 1:308559/3‑148 (MQ=255) caaaCCCGCCACGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTc > 4:58842/2‑149 (MQ=255) aaaaCCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTc < 6:103137/149‑1 (MQ=255) cccGCCGTGGCTGGTTTGGGTCACACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATGGCCAGCATCATCGGCGGCGAGCTGTTTACCTTTACGCAAAACGTCATCCATCTATGCTTCATGACGCTCATTCGTGa < 6:164846/149‑1 (MQ=255) cccGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGa < 3:14148/149‑1 (MQ=255) ccgccgTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAg > 5:122191/1‑149 (MQ=255) ccgccgTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAg < 4:179887/149‑1 (MQ=255) | GTATCGACACCGCCGTTGACATAGACATGCTGCAGCTCCGACGCGCTCTTGGATTGCATTGCCGCTTCGGACAACAGGCCTGAATAGGCTTCCAAAGCTGAAATATCAGTCATTCACTTTTCTCCAGGCATCAAAAAACCCGCCGTGGCGGGTTTGGGTCAAACGATTTGAGCAGGCTCGTTACGCGT‑CACGCTCTAC‑GGCGATTGGATCGCCAGCATCATCGGCGGCGAGCTGTTTACCATTACGCAAAACGTCATCCATCAATGCTTCATGACGCTCATTCGTGAG > NC_002947/4382677‑4382964 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |