| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,449,744 | G→C | 6.3% | intergenic (+259/‑183) | nicR → / → nicA | HTH‑type transcriptional repressor NicR/nicotinate dehydrogenase subunit A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,449,744 | 0 | G | C | 6.3% | 196.2 / 3.2 | 64 | intergenic (+259/‑183) | nicR/nicA | HTH‑type transcriptional repressor NicR/nicotinate dehydrogenase subunit A |
| Reads supporting (aligned to +/- strand): ref base G (24/35); new base C (2/2); total (26/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.56e-01 | |||||||||||
CGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCCTGCTGGCCA‑ATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTAGTGAGTACTTACCGAAACGCTCGCGTCATTTGAGTCCTT > NC_002947/4449599‑4449891 | cgTAGGAGCGGGTTCACCCGCGAATGGTCCGGCCCTGCTGGCCA‑ATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCgcgg > 8:228456/1‑149 (MQ=255) ggAGCGGGTTCACCCGCGAATGGGCCGGCCCTGCTGGCCA‑ATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCgcgggcgg > 8:159870/1‑149 (MQ=255) gAGCGGGTTCACCCGCGAATGGGCCGGCCCTGCTGGCCA‑ATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGggcggc > 1:101360/1‑149 (MQ=255) aGCGGGTTCACCCGCGAATGGGCCGGCCCTGCTGGCCA‑ATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGgcggcg > 2:338531/1‑149 (MQ=255) gggTCCACCCGCGAATGGGCCGGCCCTGCTGGCCA‑ATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTc > 1:201463/1‑149 (MQ=255) ggTTCACCCGCGAATGGGCCGGCCCTGCTGGCCA‑ATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCg < 8:229027/149‑1 (MQ=255) ggTTCACCCGCGAATGGGCCGGCCCTGCTGGCCA‑ATATCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCCCGCGCGgcgcatc < 1:34580/149‑4 (MQ=255) gTTCACCCGCGAATGGGCCGGCCCTGCTGGCCA‑ATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCgg < 4:287874/149‑1 (MQ=255) ccGCGAATGGGCCGGCCCTGCTGGCCAGATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTcc > 1:16747/1‑149 (MQ=255) ccGCGAATGGGCCGGCCCTGCTGGCCA‑ATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGAGGCGCCGCGCGGGCGGCGCTCGGTTTccc < 7:159870/149‑1 (MQ=255) cgcgAATGGGCCGGCCCTGCTGGCCA‑ATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGTGGCTCGGCACAGCGCGATGCGCCGCTCGGGCGGCGCTCGGTTTCCCg < 2:267754/149‑1 (MQ=255) gcgAATGGGCCGGCCCTGCTGGCCA‑ATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCgg < 4:232345/149‑1 (MQ=255) gAATGGGCCGGCCCTGCTGGCCA‑ATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGgc < 7:52674/149‑1 (MQ=255) ccggccCTGCTGGCCA‑ATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGAc > 8:53538/1‑148 (MQ=255) gccCTGCTGGCCA‑ATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCAGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATc < 3:262222/149‑1 (MQ=255) ccTGCTGGCCA‑ATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCtt < 2:2681/149‑1 (MQ=255) ctgGCCA‑ATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCa < 3:347591/147‑1 (MQ=255) gCCA‑ATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCt > 5:191825/1‑149 (MQ=255) cA‑ATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGc > 6:67119/1‑149 (MQ=255) cA‑ATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGc < 4:7646/149‑1 (MQ=255) aTCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGccc < 4:219850/149‑1 (MQ=255) ccACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCccac > 4:344830/1‑148 (MQ=255) cACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCccacca < 3:344830/149‑1 (MQ=255) cACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCccacca < 5:356340/149‑1 (MQ=255) cACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCGACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGCCAATCTTCATCCCTGCCccacca > 3:252154/1‑149 (MQ=255) aCCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCccacca > 8:11411/1‑148 (MQ=255) cTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACcatca < 7:11411/149‑1 (MQ=255) cTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACcatca < 2:16747/149‑1 (MQ=255) cTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACcatca < 6:191825/149‑1 (MQ=255) tGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGA‑GCGCCGCCCGCGCGgcgca > 4:41588/1‑102 (MQ=25) tGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGA‑GCGCCGCCCGCGCGgcgca < 3:41588/103‑2 (MQ=25) tGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGCGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCCGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACcatca > 8:34663/1‑148 (MQ=255) ccGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATa < 4:312251/148‑1 (MQ=255) gATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGc > 6:103891/1‑134 (MQ=255) gATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGc < 5:103891/134‑1 (MQ=255) ccaccaCCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCAt < 2:129404/149‑1 (MQ=255) caccGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATctct > 7:264390/1‑149 (MQ=255) caccGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATctct > 1:158011/1‑149 (MQ=255) accGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTg < 1:338531/149‑1 (MQ=255) accGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTg < 2:101360/149‑1 (MQ=255) ccGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCGCGGTTTACCGGGCGCCGACAATCTTCATCCCTGCCCCACCCACATAGTTGTGTGGAAATTAATATATgg > 1:188052/1‑149 (MQ=255) cGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGc < 5:337077/149‑1 (MQ=255) tAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGct > 3:348101/1‑149 (MQ=255) tAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGAGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTATCTGCAAATTCATATCTGGCCTGCTTATTGc > 6:213891/1‑148 (MQ=255) cccGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGctcact > 2:87518/1‑149 (MQ=255) cccGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGctcact < 5:67119/149‑1 (MQ=255) cTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTc < 7:228456/148‑1 (MQ=255) tACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCAt > 4:319657/1‑149 (MQ=255) cacacacaAACTCTGTGGCTCGGCACAGCGCGATTCGCCGCGCGGTCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCAt < 5:213891/147‑1 (MQ=255) cacacacaAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCAt < 3:79528/147‑1 (MQ=255) acacacaAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTa > 4:186417/1‑149 (MQ=255) acacaAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTg < 6:231551/104‑1 (MQ=255) acacaAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTg > 5:231551/1‑104 (MQ=255) acaACCTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCGTCATCCATGCCCCACCATAATAGTTCTCGGCAAATTAATCTCTGGCCTGCTGCTGGCTCACTCATTTCAGGTAGt > 8:341212/1‑147 (MQ=255) acaAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTAGt > 3:352281/1‑147 (MQ=255) aaaCTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTAGTGAGt < 4:348101/149‑1 (MQ=255) cTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTGTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTAGTGAGTACTTACCGaaa < 4:18557/149‑1 (MQ=255) ggCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTAGTGAGTACTTACCGAAAc < 8:264390/147‑1 (MQ=255) caGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTAGTGAGTACTTACCGAAACGCTcgc < 4:173048/149‑1 (MQ=255) cgATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGTGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTAGTGAGTACTTACCGAAACGCTCGCGTCAt < 1:87518/149‑1 (MQ=255) cgATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTAGTGAGTACTTACCGAAACGCTCGCGTCAt < 7:34663/149‑1 (MQ=255) gATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTAGTGAGTACTTACCGAAACGCTCGCGTCAtt > 3:269449/1‑149 (MQ=255) gagcgcCGCCCGCGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTAGTGAGTACTTACCGAAACGCTCGCGTCAttt > 8:319739/3‑149 (MQ=255) aTGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTAGTGAGTACTTACCGAAACGCTCGCGTCAttt < 2:158011/149‑1 (MQ=255) cgccgcGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTAGTGAGTACTTACCGAAACGCTCGCGTCATTTGa < 7:53538/148‑1 (MQ=255) gccgaGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTCCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTAGTGAGTACTTACCGAAACGCTCGCGTCATTTGa < 1:173930/147‑1 (MQ=255) cgcgcgGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTAGTGAGTACTTACCGAAACGCTCGCGTCATTTGAGTcc < 4:269449/149‑1 (MQ=255) cgcgGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTAGTGAGTACTTACCGAAACGCTCGCGTCATTTGAGTCCtt < 5:148904/149‑1 (MQ=255) | CGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCCTGCTGGCCA‑ATCTCCACCTGCCGATCACCGTTGCCGCCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACACAAACTCGGGGGCTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGGTTTCCCGGGCGCCGACAATCTTCATCCCTGCCCCACCATCATAGTTCTCTGCAAATTCATCTCTGGCCTGCTTCTTGCTCACTCATTTCATGTAGTGAGTACTTACCGAAACGCTCGCGTCATTTGAGTCCTT > NC_002947/4449599‑4449891 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |