| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,551,777 | C→T | 9.5% | C382C (TGC→TGT) | pydA → | NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,551,777 | 0 | C | T | 9.5% | 202.3 / 8.7 | 75 | C382C (TGC→TGT) | pydA | NADP‑dependent dihydropyrimidine dehydrogenase subunit PreA |
| Reads supporting (aligned to +/- strand): ref base C (28/39); new base T (4/3); total (32/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.57e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.30e-02 | |||||||||||
CAAGTCGGTCGCGCACATTGACCAGGAGGCGTGCATTGGCTGCGGGCGCTGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTACCTGAACTGGACGCAGGATCCGCGTAACCCCTACCGTGAGGCCAGTTGAAGCGGGTCACCGCCT > NC_002947/4551633‑4551921 | cAAGTCGGTCGCGCACATTGACCAGGAGGCGTGCATTGGCTGCGGGCGCTGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTa < 1:228195/148‑1 (MQ=255)cAAGTCGGTCGCGCACATTGACCAGGAGGCGTGCATTGGCTGCGGGCGCTGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAg < 2:337948/149‑1 (MQ=255) aaGTCGGTCGCGCACATTGACCAGGAGGCGTGCATTGGCTGCGGGCGCTGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGGATGCGTAgg > 4:303584/1‑149 (MQ=255) gcACATTGACCAGGAGGCGTGCATTGGCTGCGGGCGCTGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCtgt > 1:27220/1‑149 (MQ=255) gcACATTGACCAGGAGGCGTGCATTGGCTGCGGGCGCTGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCtgt < 2:114503/149‑1 (MQ=255) acaTTGACCAGGAGGCGTGCATTGGCTGCGGGCGCTGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGc < 3:247558/149‑1 (MQ=255) acaTTGACCAGGAGGCGTGCATTGGCTGCGGGCGCTGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGc < 1:245570/149‑1 (MQ=255) ggaggCGTGCATTGGCTGCGGGCGCTGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCt < 5:17932/149‑1 (MQ=255) ggaggCGTGCATTGGCTGCGGGCGCTGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCt < 3:7245/149‑1 (MQ=255) aggCGTGCATTGGCTGCGGGCGCTGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGc < 8:72804/149‑1 (MQ=255) gCGTGCATTGGCTGCGGGCGCTGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGccc < 4:351692/149‑1 (MQ=255) gCGTGCATTGGCTGCGGGCGCTGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGccc > 7:100297/1‑149 (MQ=255) tGCATTGGCTGCGGGCGCTGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGt < 5:231515/149‑1 (MQ=255) tGCATTGGCTGCGGGCGCTGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGt > 7:178006/1‑149 (MQ=255) aatgtGGCAGCGCCCGCAGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTg > 2:311475/5‑149 (MQ=255) cATTGGCTGCGGGCGCTGCCACTTTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AACGAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTg < 1:78722/149‑1 (MQ=255) cATTGGCTGCGGGCGCTGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTg > 7:289938/1‑148 (MQ=255) ttGGCTGCGGGCGCTGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGTGTAgg > 6:221429/1‑115 (MQ=255) ttGGCTGCGGGCGCTGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGTGTAgg < 5:221429/115‑1 (MQ=255) ttGGCTGCGGGCGCTGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGTGTAgg < 7:215168/115‑1 (MQ=255) ttGGCTGCGGGCGCTGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGTGTAgg < 7:220779/115‑1 (MQ=255) ttGGCTGCGGGCGCTGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGTGTAgg > 8:215168/1‑115 (MQ=255) ttGGCTGCGGGCGCTGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGTGTAgg > 8:220779/1‑115 (MQ=255) ttGGCTGCGGGCGCTGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGaa < 1:237633/149‑1 (MQ=255) cTGCGGGCGCTGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACt < 3:296036/149‑1 (MQ=255) tGCGGGCGCTGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTg > 7:10701/1‑149 (MQ=255) cGGGCGCTGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGc < 5:252188/148‑1 (MQ=255) gggCGCTGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCAt < 2:27220/149‑1 (MQ=255) gcTGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGa > 8:42619/1‑148 (MQ=255) tGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAAt > 3:217195/1‑149 (MQ=255) ccACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATg < 3:145771/148‑1 (MQ=255) cacaTTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGa < 2:106332/149‑1 (MQ=255) acaTTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAg > 6:290071/1‑149 (MQ=255) tggtgcgAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAAt < 1:102229/138‑1 (MQ=255) tggtgcgAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAAt > 2:102229/3‑140 (MQ=255) cgtgcgAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGGATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGcaca < 3:303584/148‑1 (MQ=255) ggACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCg < 5:205984/149‑1 (MQ=255) cTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGc < 8:10701/149‑1 (MQ=255) cTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATAACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAga > 8:352578/1‑148 (MQ=255) gCACCAGGCGATTGCCAGCACTCTCAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGACTGGGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGTAGGCACAGGATACCGTCAAGCCGt < 8:327867/149‑1 (MQ=255) aGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAg > 8:121555/1‑69 (MQ=255) aGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAg < 7:121555/69‑1 (MQ=255) cGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GATGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTACCTGAAc < 8:100297/149‑1 (MQ=255) gATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCGAGCCGTACCTGAACt < 8:178006/149‑1 (MQ=255) aTTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCGCTA‑CCGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTACCTGAACt < 1:311475/149‑1 (MQ=255) cAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTAc < 1:185061/136‑1 (MQ=255) cAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTAc > 2:185061/1‑136 (MQ=255) cAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTACCTGAACTGGACg > 4:52411/1‑148 (MQ=255) aGCTCGCTGAAGGCTGACGGCACGCATGCCGACAGAGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTACCTGAACTGGACGCa < 8:297843/149‑1 (MQ=255) cACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTACCTGAACTGGACGCAg > 6:259590/1‑148 (MQ=255) aCGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTACCTGAACTGGACGCAGGa < 1:61489/149‑1 (MQ=255) aCGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTACCTGAACTGGACGCAGGa > 2:153725/1‑149 (MQ=255) cGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTACCTGAACTGGACGCAGGAt < 1:10366/149‑1 (MQ=255) gCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTACCTGAACTGGACGCAGGATc > 8:39457/1‑149 (MQ=255) aaGGCTGACGGCACGGATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGATAACTGCATCGTAATGGAGGCACAGGATACCGGCAAGCCGTACCTGAACTGGACGCAGGATTcgc < 5:347004/148‑1 (MQ=255) aaGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTACCTGAACTGGACGCAGGATCcgcg > 2:244460/1‑149 (MQ=255) aaGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTACCTGAACTGGACGCAGGATCcgc < 5:290071/148‑1 (MQ=255) aaGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTACCTGAACTGGACGCAGGATCcgc < 8:136158/148‑1 (MQ=255) ggCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTACCt < 1:291292/126‑1 (MQ=255) ggCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTACCt > 2:291292/1‑126 (MQ=255) ggCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTACCTGAACTGGACGCAGGATCCGCGt > 1:160584/1‑148 (MQ=255) cTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTACCTGAACTGGACGCAGGATCCGCGTAAc > 3:321188/1‑149 (MQ=255) tGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTACCTGAACTGGACGCAGGATCCGCGTAAcc > 7:33244/1‑149 (MQ=255) aCGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTACCTGAACTGGACGCAGGATCCGCGTAAccc > 2:333514/1‑148 (MQ=255) gCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTACCTGAACTGGACGCAGGATCCGCGTAACCCCTAc < 2:160584/149‑1 (MQ=255) gCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTACCTGAACTGGACGCAGGATCCGCGTAACCCCTACCGt > 3:76263/1‑148 (MQ=255) tACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTACCTGAACTGGACGCAGGATCCGCGTAACCCCTACCGTGAGGCCAg > 3:127110/1‑149 (MQ=255) tACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCATACCTGAACTGGACGCAGGATCCGCGTAACCCCTACCGTGAGGCCAg > 4:159575/1‑149 (MQ=255) tgtgATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTACCTGAAc > 3:315439/1‑106 (MQ=255) tgtgATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTACCTGAAc < 4:315439/106‑1 (MQ=255) tgATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTACCTGAACTGGACGCAGGATCCGCGTAACCCCTACCGTGAGGCCAGTTGAAGc < 3:52411/149‑1 (MQ=255) aTCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTACCTGAACTGGACGCAGGATCCGCGTAACCCCTACCGTGAGGCCAGTTGAAGCgg < 8:33244/149‑1 (MQ=255) aTCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTACCTGAACTGGACGCAGGATCCGCGTAACCCCTACCGTGAGGCCAGTTGAAGCgg < 4:76263/149‑1 (MQ=255) a‑gagGAATGTGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGATATGGAGGCACAGGATACCGGCAAGCCGTACCTGAACTGGACGCAGGATCCGCGTAACCCCTACCGTGAGGGCAGTTGAAGCGGGTCAc > 6:282204/1‑149 (MQ=255) aaTGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTACCTGAACTGGACGCAGGATCCGCGTAACCCCTACCGTGAGGCCAGTTGAAGCGGGTCACCGCCt < 1:153725/149‑1 (MQ=255) | CAAGTCGGTCGCGCACATTGACCAGGAGGCGTGCATTGGCTGCGGGCGCTGCCACATTGCGTGCGAGGACACCTCGCACCAGGCGATTGCCAGCACGCTGAAGGCTGACGGCACGCATGCCTACAGTGTGATCG‑AA‑GAGGAATGCGTAGGCTGTAACCTGTGCCAGATCACCTGCCCGGTGGAAAACTGCATCGAAATGGAGGCACAGGATACCGGCAAGCCGTACCTGAACTGGACGCAGGATCCGCGTAACCCCTACCGTGAGGCCAGTTGAAGCGGGTCACCGCCT > NC_002947/4551633‑4551921 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |