| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,015,788 | C→G | 10.9% | intergenic (‑51/+183) | PP_5679 ← / ← PP_4421 | hypothetical protein/aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,015,788 | 0 | C | G | 10.9% | 170.1 / 12.5 | 64 | intergenic (‑51/+183) | PP_5679/PP_4421 | hypothetical protein/aminotransferase |
| Reads supporting (aligned to +/- strand): ref base C (27/30); new base G (2/5); total (29/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.42e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.75e-01 | |||||||||||
CCGCTTGCAGAGTGACTGCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑AAAAAAAAAAAGCCCGCCTAAAGGCGGGCTTAAAACG > NC_002947/5015645‑5015929 | ccGCTTGCAGAGTGACTGCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCgg > 3:127117/1‑149 (MQ=255) gCAGAGTGACTGCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCG‑CCGGAGACCGGTGCgg < 2:22481/148‑1 (MQ=255) cAGAGTGACTGCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCG‑CCGGAGACCGGTGCggg < 4:19998/148‑1 (MQ=255) agagTGACTGCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCt > 2:269135/1‑149 (MQ=255) gagTGACTGCTGGGCACGAAGCTTCTCGGCAGCCCTCGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCtt > 1:61035/1‑149 (MQ=255) gTGACTGCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTGTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCtttt < 5:300157/149‑1 (MQ=255) aCTTCTGGGCACGATGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACt < 5:374882/149‑1 (MQ=255) tgctgGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACttt > 5:147923/1‑149 (MQ=255) gggCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGATCCAGCTCGGTCATCCTATCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGcgcg < 5:267344/133‑1 (MQ=255) gggCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGcgcg > 6:267344/1‑133 (MQ=255) ggCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCg < 3:161906/147‑1 (MQ=255) cACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGcc > 3:271272/1‑149 (MQ=255) gAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTg > 1:261471/1‑149 (MQ=255) gCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAGTCCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGa < 1:269135/149‑1 (MQ=255) ttCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCG‑CCGGAGACCGGTGCggg < 4:306484/124‑1 (MQ=255) ttCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCG‑CCGGAGACCGGTGCggg > 3:306484/1‑124 (MQ=255) ttCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAg > 4:32736/1‑149 (MQ=255) ctcGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCATTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAg < 6:68483/147‑1 (MQ=255) ggCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTAt < 3:32736/147‑1 (MQ=255) ggCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATc < 5:159851/148‑1 (MQ=255) ccTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCG‑CCGGAGACCGGTGCGGGCtta > 4:314509/1‑116 (MQ=39) ccTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCG‑CCGGAGACCGGTGCGGGCtta < 3:314509/117‑2 (MQ=39) tGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATc < 2:365663/140‑1 (MQ=255) tGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATc > 1:365663/1‑140 (MQ=255) cGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCACCCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGt < 1:109245/149‑1 (MQ=255) gTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTAc < 8:224983/149‑1 (MQ=255) ggTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGAccc > 2:366209/1‑136 (MQ=255) ggTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTcc < 3:30501/148‑1 (MQ=255) aGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTtgt > 7:332961/1‑149 (MQ=255) ccACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTtgtg > 3:304943/1‑148 (MQ=255) cACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGaa < 5:99669/149‑1 (MQ=255) aCTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAAc > 3:203456/1‑149 (MQ=255) cTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACt > 3:361909/1‑149 (MQ=255) tGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTtgtg < 1:169832/144‑1 (MQ=255) tGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTtgtg > 2:169832/1‑144 (MQ=255) cttcttTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACtga < 2:61035/148‑1 (MQ=255) cttTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACtgatg < 4:127117/147‑1 (MQ=255) tttGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACtgatga > 6:16515/1‑147 (MQ=255) tGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACa < 5:3406/147‑1 (MQ=255) gATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACtgat > 7:160848/1‑142 (MQ=255) gATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACtgat < 8:160848/142‑1 (MQ=255) ggAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCtt < 8:332961/149‑1 (MQ=255) aGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCttt > 7:4081/1‑149 (MQ=255) aGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCttt > 7:189527/1‑149 (MQ=255) cGGGCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGAtt < 4:21899/149‑1 (MQ=255) gTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATtgt < 4:203456/149‑1 (MQ=255) tAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTg < 2:7344/137‑1 (MQ=255) tAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTg > 1:7344/1‑137 (MQ=255) gcTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCt < 2:102426/130‑1 (MQ=255) gcTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCt > 1:102426/1‑130 (MQ=255) gTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTgg < 8:145434/122‑1 (MQ=255) gTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTgg > 7:145434/1‑122 (MQ=255) tttGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑aaaaaa > 6:151089/1‑148 (MQ=255) tCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑AAAAAAAAAAAGc > 4:276359/1‑149 (MQ=255) cACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑aaaaaaaaaagccc < 4:361909/148‑5 (MQ=255) agatgagatgaATAAG‑CCCGCA‑CCGGTCTACGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATATCACTAC‑‑AAAAAAAAAAGCCCGcc < 4:304943/148‑1 (MQ=255) gatgaATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑aaaaaa > 3:191046/1‑132 (MQ=255) gatgaATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑aaaaaa < 4:191046/132‑1 (MQ=255) ggcgacccGCG‑CCGGAGACCGGTGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTGGGGAACTGATGACAGCGTCTTGGCTTTGATTGTTATAGCACTAC‑AAAAAAAAAAAGCCCGCCTAAAGGCggg < 2:4409/144‑1 (MQ=255) aaG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGTACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑AAAAAAAAAAAGCCCGCCTAAAGGCGGGCt < 5:16515/149‑1 (MQ=255) g‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑AAAAAAAAAAAACCCGACTAAAGGCGGGCtt > 4:337685/1‑148 (MQ=255) cGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑AAAAAAAAAAAGCCCGCCTAAAGGCGGGCTTaaaa < 5:151089/149‑1 (MQ=255) gCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAATTACGTCCTTGTTAACTGATGACAGCGTCTTGGCTTTGATTGTGATACCAATACAAAAAAAAAAAAGCCCGCCTAAAGGCGGGCTTaaaa < 4:271272/149‑1 (MQ=255) cGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑AAAAAAAAAAAGCCCGCCTAAAGGCGGGGTTAAAACg > 3:217914/1‑146 (MQ=255) | CCGCTTGCAGAGTGACTGCTGGGCACGAAGCTTCTCGGCAGCCCTGGACGTATAGGTAGCCACTGCTTCTTTGATCGGAGCCAGCTCGGTCATCCTAGCGCTCTCGTTTGAGTCCACGATGAGATGAATAAG‑CCCGCA‑CCGGTCTCCGGCGCGGGCTTTTACTTTCCGGGCCTTGGACAGTATCTGACCCGAAAGTACGTCCTTGTGAACTGATGACAGCGTCTTGGCTTTGATTGTGATAGCACTAC‑AAAAAAAAAAAGCCCGCCTAAAGGCGGGCTTAAAACG > NC_002947/5015645‑5015929 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |