| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,103,088 | A→T | 7.7% | intergenic (+20/‑170) | phhB → / → PP_5694 | pterin‑4‑alpha‑carbinolamine dehydratase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,103,088 | 0 | A | T | 7.7% | 226.5 / 6.5 | 77 | intergenic (+20/‑170) | phhB/PP_5694 | pterin‑4‑alpha‑carbinolamine dehydratase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (39/31); new base T (3/3); total (43/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.13e-01 | |||||||||||
CTGCTGACTGAATGGGGCAAGGTCACCGTGACCTGGTGGAGCCACTCGATCAAAGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATCCAGACTTGTGTATCCTGCCCGAGCTTTTTGAAGCTACAAACGCGCCTGGCGCAGACTTTTCACTC > NC_002947/5102940‑5103236 | ctgctgACTGAATGGGGCAAGGTCACCGTGACCTGGTGGAGCCACTCGATCAAAGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCa < 4:55330/149‑1 (MQ=255) ctgactgaATGGGGCAAGGTCACCGTGACCTGGTGGAGCCACTCGATCAAAGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCagag < 5:10238/149‑1 (MQ=255) ctgactgaATGGGGCAAGGTCACCGTGACCTGGTGGAGCCACTCGATCAAAGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCagag < 7:105539/149‑1 (MQ=255) acttaATGGGGCAAGGTCACCGTGACCTGGTGGAGCCACTCGATCAAAGGCCTTCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGATGGCCGGAAGTAAACACCAGAAGGAAGGGGCCagag < 3:9526/146‑1 (MQ=255) tgaATGGGGCAAGGTCACCGTGACCTGGTGGAGCCACTCGATCAAAGGCCTGCACCGCAACGACTACATCATGTGTGCACGCACTGA‑CATGGTGGCGGAAACGGCTGAAGGGCGGAAGTAAACACCCGAAGGAAGGGGCCAGAGGcacc > 6:250239/1‑149 (MQ=255) aaTGGGGCAAGGTCACCGTGACCTGGTGGAGCCACTCGATCAAAGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGACCCAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGccc < 1:298342/147‑1 (MQ=255) aaTGGGGCAAGGTCACCGTGACCTGGTGGAGCCACTCGATCAAAGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCTCTGGCCCCtt < 2:344649/149‑1 (MQ=255) aTGGGGCAAGGTCACCGTGACCTGGTGGAGCCACTCGATCAAAGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCTCTGGCCCCttc < 8:258293/149‑2 (MQ=255) tGGGGCCAGGTCACCGTGACCTGGTGGAGCCACTCGATCAAAGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCTCTGGCCCCttcc < 6:342667/149‑3 (MQ=255) gCAAGGTCACCGTGACCTGGTGGAGCCACTCGATCAAAGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCa > 5:285391/1‑149 (MQ=255) caGGTCACGGTGACCTGGTGGAGCCCCTCGATCAAAGGCCTGCCCCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTCAGCACCAGAAGGCAGGGGCCCGAGGCCGCTGGTTTCATg > 4:272353/2‑149 (MQ=255) aaGGTCACCGTGACCTGGGGGAGCCACTCGATCACAGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATg < 7:291707/149‑1 (MQ=255) aGGTCACCGTGACCTGGTGGAGCCACTCGATCAAAGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATgg < 7:120293/149‑1 (MQ=255) ggTCACCGTGACCTGGTGGAGCCACTCGATCAAAGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATggg < 6:366364/149‑1 (MQ=255) ggTCACCGTGACCTGGTGGAGCCACTCGATCAAAGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATggg < 8:245100/149‑1 (MQ=255) gTCACCGTGACCTGGTGGAGCCACTCGATCAAAGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATgggg > 7:12977/1‑149 (MQ=255) cACCGTGACCTGGTGGAGCCACTCGATCAAAGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCa > 3:263256/1‑149 (MQ=255) aCCGTGACCTGGTGGAGCCACTCGATCAAAGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTc < 3:189800/140‑1 (MQ=255) aCCGTGACCTGGTGGAGCCACTCGATCAAAGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTc > 4:189800/1‑140 (MQ=255) ccGTGACCTGGTGGAGCCACTCGATCAAAGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCata < 5:257587/149‑1 (MQ=255) tGACCTGGTGGAGCCACTCGATCAAAGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATAtgt < 3:48588/149‑1 (MQ=255) gACCTGGTGGAGCCACTCGATCAAAGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATAtgtg > 5:345773/1‑149 (MQ=255) gCCACTCGATCAAAGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑C‑ATGTGGCGGAAACGGGTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCGTTTTTTCATGGGGGTTATGTGCGCTGGTCGcgg > 4:105800/1‑147 (MQ=255) cACTCGATCAAAGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAAGACCAGAAGGAAGGTGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCTCCCg < 2:73504/149‑1 (MQ=255) cACTCGATCAAAGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATgg > 5:157280/1‑126 (MQ=255) cACTCGATCAAAGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATgg < 6:157280/126‑1 (MQ=255) tCGATCAAAGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCa > 5:342576/1‑148 (MQ=255) gATCAAAGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCaaaa > 7:205504/1‑149 (MQ=255) cAAAGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAAcc > 8:244309/1‑148 (MQ=255) aaaGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGTGTCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGa < 1:9841/149‑1 (MQ=255) aGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGC‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACCCCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGAc > 2:222295/1‑148 (MQ=255) gCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACaaa > 8:273570/1‑149 (MQ=255) cTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCGATTTTTCCTGGGGCATATGTGCGGAGGTCGCCCGGAAAACCGACaaccc > 8:123323/1‑146 (MQ=255) gCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGAc > 2:69986/1‑149 (MQ=255) ccGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAAcc < 3:35014/136‑1 (MQ=255) ccGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAAcc > 4:35014/1‑136 (MQ=255) gCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGa < 7:288819/149‑1 (MQ=255) cTTCATCATGTGTGCACGCACTGA‑CAAGGGGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAAc < 8:48324/149‑1 (MQ=255) ttCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAAc > 7:157365/1‑148 (MQ=255) tcatGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCGCGCAAAACCGAGAAACGACCGGGAAAAAAACCAAAc > 4:86843/1‑149 (MQ=255) atGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTg > 7:225150/1‑149 (MQ=255) gtgtgCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGt > 2:39851/1‑148 (MQ=255) gtgCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGGTGGTCGCCCGCAAAACCGAGAAACGCGCGGGACAAAAACCAAACGGtgag > 6:101911/1‑146 (MQ=255) cacgcacTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATc > 6:215717/1‑147 (MQ=255) cacgcacTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATc > 2:146883/1‑147 (MQ=255) cacgcacTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATc > 3:166987/1‑147 (MQ=255) gcacTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTATTTTCATGGGGCATATGTGCGCAGTTAGCCAGCAAAACCGCCAAACGACCGGGAAAAAAACCAAACTGTCATCCAGa > 1:309499/1‑148 (MQ=255) acTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTc < 5:168002/139‑1 (MQ=255) acTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTc > 6:168002/1‑139 (MQ=255) acTGA‑CAAGGTGGCGGAAACGGCGGAAGGCCGTAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCTCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATCCAGACtt < 5:162158/149‑1 (MQ=255) tGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATCCAGACTtgt < 5:215717/149‑1 (MQ=255) a‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATCCAGACTtgtg > 6:189416/1‑148 (MQ=255) aaGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATCTAGACTTGTGTAt > 7:189017/1‑149 (MQ=255) aaGGTGGCGGAAACGGCTGAAGGACGGAAGTAAACACCACAAGGAAGCGGACAGAGGCCCCTTTTTTGATGGGGCATATGTGAGCTGTTAGCACGCAAAACAGACAAACGACCGGGAAAAAAACCCAACTGTCATCCAGACTTCAGTAt > 4:369390/1‑149 (MQ=255) aGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATCTAGACTTGTGTATc < 8:189017/149‑1 (MQ=255) aGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATCCAGACTTGTGTATc < 6:342576/149‑1 (MQ=255) ggAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATCCAGACTTGTGTATCCTGccc > 1:39279/1‑148 (MQ=255) ggAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGAGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATCCAGACTTGTGTATCCTGCCCg < 4:141075/149‑1 (MQ=255) gAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATCCAGACTTGTGTATCCTGccc > 3:145882/1‑147 (MQ=255) aaaCGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGCGCATATGTGCGCTGTTCTCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATCCAGACTTGTGTATCCTGCCCGAg < 6:345773/149‑1 (MQ=255) cTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATCCAGACTTGTGTATCCTGCCCGAGCttttt < 8:12977/149‑1 (MQ=255) tGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATCCAGACTTGTGTATCCTGCCCGAGCttttt > 8:47924/1‑148 (MQ=255) gAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGCCAAACGACCGGGAAAAAAACCAAACTGTCATCCAGACTTGTGTATCCTGCCCGAGCGTTTTg > 8:58756/1‑148 (MQ=255) aGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATCCAGACTTGTGTATCCTGCCCGAGCTTTTTGaa < 7:47924/148‑1 (MQ=255) aGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATCCAGACTTGTGTATCCTGCCCGAGCTTTTTGAAg < 5:178425/149‑1 (MQ=255) aGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATCCAGACTTGTGTATCCTGCCCGAGCTTTTTGAAg < 8:205504/149‑1 (MQ=255) aGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATCCAGACTTGTGTATCCTGCCCGAGCTTTTTGAAg > 3:199971/1‑149 (MQ=255) cGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATCCAGACTTGTGTATCCTGCCCGAGCTTTTTGAAGCTAc < 7:244309/149‑1 (MQ=255) cGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATCCAGACTTGTGTATCCTGCCCGAGCTTTTTGAAGCTAc < 1:69986/149‑1 (MQ=255) aaGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATCCAGACTTGTGTATCCTGCCCGAGCTTTTTGAAGCTACaaa > 3:160051/1‑149 (MQ=255) aaCACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATCCAGACTTGTGTATCCTGCCCGAGCTTTTTGAAGCTACAAACgcgc < 5:101911/149‑1 (MQ=255) cAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATCCAGACTTGTGTATCCTGCCCGAGCTTTTTGAAGCTACAAACGCGCCTGgc > 2:222044/1‑149 (MQ=255) tgaaaaaaggGGCCTCTGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGCCAAACGCCCGGGAAAAAAACCAAACTGTCACCCAGACTTGTGTATCCTGCCCGAGCTTTTTGAAGCTACAAACGCGCCTGgcg > 5:195541/7‑149 (MQ=255) aGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATCCAGACTTGTGTATCCTGCCCGAGCTTTTTGAAGCTACAAACGCGCCTGgcg > 8:23482/1‑149 (MQ=255) gaaggaagGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGAc > 4:199855/1‑66 (MQ=255) gaaggaagGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGAc < 3:199855/66‑1 (MQ=255) aaggaaggGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATCCAGACTTGTGTATCCTGCCCGAGCTTTTTGAAGCTACAAACGCGCCTGGCGCa < 5:153594/149‑1 (MQ=255) aaaaggGGCCTCTGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTAATCAAGACTTGTGTATCCTGCCCGAGCTTTTTGAAGCTACAAACGCGCCTGGCGCAGa > 7:136429/3‑149 (MQ=255) aaaggGGCCTCTGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATCCAGACTTGTGTATCCTTCCCGAGCTTTTTGAAGCTACAAACGCGCCTGGCGCAGAc > 3:256873/2‑149 (MQ=255) gCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATCCAGACTTGTGTATCCTGCCCGAGCTTTTTGAAGCTACAAACGCGCCTGGCGCAGACTTTtca > 3:222814/1‑149 (MQ=255) ccAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATCCAGACTTGTGTATCCTGCCCGAGCTTTTTGAAGCTACAAACGCGCCTGGCGCAGACTTTtcac < 7:273570/149‑1 (MQ=255) agagGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATCCAGACTTGTGTATCCTGCCCGAGCTTTTTGAAGCTACAAACGCGCCTGGCGCAGACTTTtcactc < 1:222295/149‑1 (MQ=255) | CTGCTGACTGAATGGGGCAAGGTCACCGTGACCTGGTGGAGCCACTCGATCAAAGGCCTGCACCGCAACGACTTCATCATGTGTGCACGCACTGA‑CAAGGTGGCGGAAACGGCTGAAGGCCGGAAGTAAACACCAGAAGGAAGGGGCCAGAGGCCCCTTTTTTCATGGGGCATATGTGCGCTGTTCGCCCGCAAAACCGACAAACGACCGGGAAAAAAACCAAACTGTCATCCAGACTTGTGTATCCTGCCCGAGCTTTTTGAAGCTACAAACGCGCCTGGCGCAGACTTTTCACTC > NC_002947/5102940‑5103236 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |