| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,278,469 | G→C | 9.3% | intergenic (+209/‑21) | PP_4652 → / → purP | membrane protein/adenine:H+ symporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,278,469 | 0 | G | C | 9.3% | 208.8 / 9.1 | 73 | intergenic (+209/‑21) | PP_4652/purP | membrane protein/adenine:H+ symporter |
| Reads supporting (aligned to +/- strand): ref base G (33/33); new base C (2/5); total (35/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.32e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.47e-01 | |||||||||||
AGGGCCAGAAAAACCCATTCCCCAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTACATCCTGTTCGTCAACCCGAGCATCCTCGGCGAGA > NC_002947/5278323‑5278616 | aGGGCCAGAAAAACCCATTCCCCAACGGCCATAGGCCCCGGCCATGCATGCTGGTATTATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCgggg < 4:108573/149‑1 (MQ=255) gggCCAGAAAAACCCATTCCCCAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCggggg > 3:3559/1‑149 (MQ=255) ggCCAGAAAAACCCATTCCCCAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGgc < 4:168892/149‑1 (MQ=255) cAGAAAAACCCATTCCCCAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGcc < 8:346608/149‑1 (MQ=255) cAGAAAAACCCATTCCCCAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGcc > 3:170869/1‑149 (MQ=255) gAAAAACCCATTCCCCAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCtt < 3:193172/149‑1 (MQ=255) gAAAAACCCATTCCCCAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCCCCGGCGccat < 1:23346/149‑3 (MQ=255) aaaaaCCCATTCCCCAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCCCCGGCGCCATg < 3:46596/149‑1 (MQ=255) aaaaCCCATTCCCCAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTgg < 4:353403/149‑1 (MQ=255) aaCCCATTCCCCAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCAAGGCGCCCCCGGCGCCATgaat < 8:19596/149‑4 (MQ=255) aCCCATTCCCCAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTggg > 6:33428/1‑147 (MQ=255) ccATTCCCCAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGc > 1:285064/1‑149 (MQ=255) aTTCCCCAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCgg < 5:183408/149‑1 (MQ=255) cAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGc > 2:122262/1‑149 (MQ=255) cAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGc > 8:246600/1‑149 (MQ=255) cAACGGCCATAGGCCCCCACCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGc > 1:145209/1‑149 (MQ=255) ccATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGaaa < 3:175668/149‑1 (MQ=255) ccATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCCCCGGCGcca > 4:370400/1‑126 (MQ=255) ccATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCCCCGGCGcca < 3:370400/127‑2 (MQ=255) gCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCTTTGGGGAGCGGGCATGCTGGAAAGGCTGt < 1:23334/149‑1 (MQ=255) ccccGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGc > 4:327329/1‑127 (MQ=255) ccccGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGc < 3:327329/127‑1 (MQ=255) ccccGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGtt > 7:77231/1‑148 (MQ=255) ccccGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCCCCGGCGcca < 5:212478/119‑2 (MQ=255) ccccGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCCCCGGCGcca > 6:212478/1‑118 (MQ=255) cccGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTc < 6:140141/149‑1 (MQ=255) atgcatgcTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAATGGCTGTTTCAACt > 2:121648/1‑147 (MQ=255) gcTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGGTGTTTCAACTAAGAGca > 5:306860/1‑148 (MQ=255) cTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGcac < 8:299464/148‑1 (MQ=255) gTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGcacac < 5:189231/147‑1 (MQ=255) tATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACacaac > 8:3414/1‑149 (MQ=255) gcgGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGt > 4:1201/1‑149 (MQ=255) ggCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTgc > 1:334673/1‑149 (MQ=255) ttttttCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCa > 1:190188/1‑149 (MQ=255) ttttCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCa < 4:3559/147‑1 (MQ=255) ttttCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCAc < 3:1201/148‑1 (MQ=255) tttCCTCCCCACACAAAACCACGGCATACGGTACGGTCTGTGCTTTGCTGTTGTGGTCGATACTTTCATGGCGACGGGGGAGCCTTGGGGAGCGGGCATGGTGGAAAGGCTGTTTCAACTAAGAGCAAACAACACCAACGTGAGCAGCg > 5:164116/1‑149 (MQ=255) ctccCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTAATTGCGCCGGGGGCGCCTTGGGGAGCGGGAATGCTGGAAAGGCAGTTTAAAAAAAGAGCACACAACAACAACGTCCCCACCGAAAt > 2:340939/1‑149 (MQ=255) ccccACACAAAACCACGGCATCCGGTAAGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATtc > 1:12157/1‑149 (MQ=255) cccACACTAAACCTCTGCATCCGGTACTGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCaa < 7:342553/111‑1 (MQ=255) ccACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTTGGGAGCGGGCATGCTGGAAAgg > 4:273503/1‑101 (MQ=255) ccACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTTGGGAGCGGGCATGCTGGAAAgg < 3:273503/101‑1 (MQ=255) ccACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATtctc < 2:334673/149‑1 (MQ=255) acacaAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGGCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTcgc < 2:18635/149‑1 (MQ=255) cacaAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTcgcg < 1:340939/149‑1 (MQ=255) cacaAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTcgcg < 5:213634/149‑1 (MQ=255) acaAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCgg > 3:339641/1‑149 (MQ=255) aaCCACGGCATCCGGTACGGGCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGAGCCTTGGGGAGAGGGCAGGCTGGAAAGGCTGTTTCAACTAAGAGCACACACCACCAACGTGCGCCCCGCGATTCTCGCTGGCgg > 8:347193/1‑148 (MQ=255) aCCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGt > 5:245042/1‑148 (MQ=255) aCCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTc > 6:149461/1‑149 (MQ=255) cACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTcac > 7:200570/1‑149 (MQ=255) cACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTcac < 1:121648/149‑1 (MQ=255) cACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTcac < 2:285064/149‑1 (MQ=255) aCGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTcacc < 4:170869/149‑1 (MQ=255) cATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCAc < 8:261397/123‑1 (MQ=255) cATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCAc > 7:261397/1‑123 (MQ=255) aTCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTcgcg > 2:245544/1‑135 (MQ=255) ggTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTg < 5:149461/149‑1 (MQ=255) gTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTgg < 7:3414/149‑1 (MQ=255) cGGTCTGTGCTTTGCTGTTGGGGGCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGcc < 6:244239/148‑1 (MQ=255) tCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATgg > 7:243152/1‑149 (MQ=255) gcTGTGCTTTGGTGTTGGGGTCGATACATTCATGGCCCCGGGGGCGCCTTGGGTAGCGGGTTTGGTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATgg < 1:122262/148‑1 (MQ=255) cTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGc < 4:86246/149‑1 (MQ=255) tgtgCTTTGCTGTTGGGGTCGATACATTCATGCCGCC‑GGGGCGCCATGGGCAGCGGGCATGCTGGAAAGGATGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGcc > 1:171912/1‑148 (MQ=255) tgCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGc < 2:12157/146‑1 (MQ=255) cTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTg < 5:350101/131‑1 (MQ=255) cTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTg > 6:350101/1‑131 (MQ=255) gggTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTACATCCTGTTCGTc < 4:339641/149‑1 (MQ=255) gTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTACATCCTGTTCGTCaa < 6:245042/149‑1 (MQ=255) aTACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTACATCCTGTTCGTCAAccc > 4:213240/1‑148 (MQ=255) aTTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCCCACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCGACATCCTGTTCATCAACCCGAGCa > 8:165561/1‑149 (MQ=255) aTTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTACATCCTGTTCGTCAACCCGAGc > 4:365551/1‑148 (MQ=255) aTTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTACATCCTGTTCGTCAACCCGAGCa > 5:139065/1‑149 (MQ=255) ttCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTACATCCTGTTCGTCAACCCGAGCAt > 2:147330/1‑149 (MQ=255) tGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTACATCCTGTTCGTCAACCCGAGCATCCTc < 7:246600/149‑1 (MQ=255) gggggCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTACATCCTGTTCGTCAACCCGAGCATCCTCGGCgaga < 8:77231/149‑1 (MQ=255) | AGGGCCAGAAAAACCCATTCCCCAACGGCCATAGGCCCCCGCCATGCATGCTGGTATGATGCGCGGCTTTTTTCCTCCCCACACAAAACCACGGCATCCGGTACGGTCTGTGCTTTGCTGTTGGGGTCGATACATTCATGGCGCCGGGGGCGCCTTGGGGAGCGGGCATGCTGGAAAGGCTGTTTCAACTAAGAGCACACAACACCAACGTGCGCACCGAGATTCTCGCGGGCGTCACCACCTTCCTGGCCATGGCCTACATCCTGTTCGTCAACCCGAGCATCCTCGGCGAGA > NC_002947/5278323‑5278616 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |