| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,360,831 | G→T | 5.6% | A3D (GCT→GAT) | rimP ← | ribosome maturation factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,360,831 | 0 | G | T | 5.6% | 261.2 / 3.3 | 82 | A3D (GCT→GAT) | rimP | ribosome maturation factor |
| Reads supporting (aligned to +/- strand): ref base G (41/36); new base T (3/2); total (44/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
GAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGATTTGAACCAACGACCTTCGGGTTATGAGCCCGACGAGCTACCAAGC > NC_002947/5360684‑5360979 | gAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAgc > 1:208512/1‑149 (MQ=255) ttACCCTGGGAAACGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCAt > 6:321187/1‑149 (MQ=255) ttACCCTGGGAAACGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCAt > 5:198900/1‑149 (MQ=255) ttACCCTGGGAAACGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCAt > 7:320382/1‑149 (MQ=255) ccTGGGAAACGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGACCCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCt > 5:66552/1‑149 (MQ=255) ccTGGGAAACGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCt < 4:20563/149‑1 (MQ=255) ggAAACGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTGGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGaaa < 5:321187/149‑1 (MQ=255) ggAAACGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGCACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGaaa < 4:80244/149‑1 (MQ=255) ggAAACGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGaaa < 3:116279/149‑1 (MQ=255) ggAAACGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGaa < 6:176982/148‑1 (MQ=255) aaaCGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAgc > 5:257928/1‑149 (MQ=255) aCGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCAGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAgcgc < 7:136842/149‑1 (MQ=255) cGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGcc < 3:230604/149‑1 (MQ=255) aTTCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCg > 7:25584/1‑147 (MQ=255) ttCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTa < 8:22793/148‑1 (MQ=255) gATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGa > 6:106012/1‑148 (MQ=255) ccAGGACTTATAGCCCAGACCCTCGACAACCGGGTCCAACAAGGCCTGCATCTGTTCTAGCTTGCTAGACACCTGAACCCCCTAGTGCATGTTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAacgac < 2:131909/149‑1 (MQ=255) ccAGCACTGATAGCCCAGACCCTCGCCAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGGTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAACGCGCCGGAGGACAacgcc > 8:99351/1‑147 (MQ=255) ccAGCACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAacgac > 7:294028/1‑149 (MQ=255) cACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCg < 7:104813/149‑1 (MQ=255) tGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGaaa > 3:144172/1‑149 (MQ=255) aTAGCCCAGACCCTCGACAACCGGGGCCAACCAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGaaa < 1:139615/147‑1 (MQ=255) gCCCAGACCCTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑Gtt > 5:244484/1‑149 (MQ=255) cccAGACCCTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTc > 2:339016/1‑149 (MQ=255) cccAGACCCTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTc < 6:244484/149‑1 (MQ=255) gACCCTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGtt < 8:294028/149‑1 (MQ=255) ccTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATcctg > 1:127098/1‑105 (MQ=255) ccTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCt < 2:127098/107‑1 (MQ=255) ccTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAg > 2:10018/1‑148 (MQ=255) cTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGc > 1:347223/1‑148 (MQ=255) tCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCa > 8:42697/1‑148 (MQ=255) aCAACCGGGTCCAACAAGGCCTTCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGAGCAAATAAAAAATGGTCGAATCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTATCaaaaa < 5:263355/149‑1 (MQ=255) ccGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGccc < 8:219503/149‑1 (MQ=255) ccGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGccc < 5:106012/149‑1 (MQ=255) ccAACAACGCCTGCAACTGATCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGCCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGaa > 6:262250/1‑148 (MQ=255) acaaGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAgg < 8:320382/149‑1 (MQ=255) caaGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAggg > 5:67777/1‑149 (MQ=255) ggCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTAGGTTAGCAAAAAGCCCCTGAAAAGGGCCt > 3:242583/1‑149 (MQ=255) gCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTc < 8:25584/149‑1 (MQ=255) catcTGGTCTAGCTTGTTCGACACCTGAACACCCTCGTGAATGCTGTGCAAATAAAAAATGGGCGAAGCTCCCATCCCTTAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTg < 4:242583/146‑1 (MQ=255) cAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGCTTCGCCCAttt < 7:45046/77‑3 (MQ=255) cAACTGTTCTAGCTTGCTCGACACCTGAACACCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGCTTCGCCCAttt > 8:45046/1‑75 (MQ=255) aCTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGaa < 1:347976/149‑1 (MQ=255) tAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGAACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGtt > 7:185598/1‑149 (MQ=255) gCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCgg < 1:339016/147‑1 (MQ=255) gCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCgg < 6:72552/147‑1 (MQ=255) gACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCgg > 3:12354/1‑143 (MQ=255) gACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCgg < 4:12354/143‑1 (MQ=255) gACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGc < 6:339129/147‑1 (MQ=255) gACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCt < 5:262250/148‑1 (MQ=255) acacCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTGCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGCAGCTGGTTGCGTGGGATgt > 3:281704/1‑148 (MQ=255) cacCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGa < 2:347223/149‑1 (MQ=255) ccTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGAtt < 6:67777/149‑1 (MQ=255) cTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGAttt > 8:101824/1‑149 (MQ=255) tGAACCCCCTCGTGCATGCTGTGAAAATAAAAAATGGGCGAAGCGCCGATCCCTGAAAGCGACGTAGGACAACGCCGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGAttt > 6:198832/1‑148 (MQ=255) ccccTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCCAAACA‑‑GTACGGTTAGCAAAAAGCCCCTGAAAAGGGCCTCCCCAGAACCAGGTTGCGGGGTCTGGAATTGAAcc > 3:127424/1‑148 (MQ=255) ccTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGATTTGAACCAAc > 8:83924/1‑149 (MQ=255) ccTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGATTTGAACCAAc > 2:358531/1‑149 (MQ=255) ccTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGATTTGAACCAAc > 5:303078/1‑149 (MQ=255) ccTCGTGCATGCTGAGCAAATAAAAAATGGGCGAAGCGCCCAACCCTGAAAGCGCCGTAGGACCACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGCGCTCCCCTGAAGCTGGTTGCGGGGGCTCTATTTGCACCCAc > 5:303285/1‑149 (MQ=255) cTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGATTTGAACCAACg > 6:378591/1‑149 (MQ=255) aTGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGATTTGAACCAACGACCTTCg < 6:257928/149‑1 (MQ=255) cTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGATTTGAACCAACGACCTTCGGGt > 4:71346/1‑149 (MQ=255) gtgCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGATTTGAACCAACGACCTTCGGGTTa > 7:23509/1‑149 (MQ=255) tgCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGATTTGAACCAACGACCTTCGGGTTAt < 7:101824/149‑1 (MQ=255) tgCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGATTTGAACCAACGACCTTCGGGTTAt < 4:182401/149‑1 (MQ=255) tgCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGATTTGAACCAACGACCTTCGGGTTAt < 8:23509/149‑1 (MQ=255) tgCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTACGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGATTTGAACCAACGACCTTCGGGTTAt < 2:208512/149‑1 (MQ=255) gCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGATTTGAACCAACGACCTTCGGGTTAt > 5:2311/1‑148 (MQ=255) cAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACTGGGTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGATTTGAACCAACGACCTTCGGGTTAt > 1:297799/1‑149 (MQ=255) aaaTAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGAGCTCCGCTGAAGCTGGTTGCGGGGGCTGGATTTGAACCAACGACCTTCGGGTTATGAg > 3:71921/1‑149 (MQ=255) aaaTAAAAAATGGGCGAAGAGCCCATCCCTGAAAGCGCCGTAGGACAAGGACGACGAAACT‑‑GTTCGGTTAGCAAAAAGCACCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGATTTTAACCAACGACCTTCGGGTTTTgcg > 1:290413/1‑147 (MQ=255) aaTAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGATTTGAACCAACGACCTTCGGGTTATGAGc < 1:10018/149‑1 (MQ=255) aaTAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGATTTGAACCAACGACCTTCGGGTTATGAGc < 6:198900/149‑1 (MQ=255) aTAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGATTTGAACCAACGACCTTCGGGTTATGAGcc > 5:334237/1‑149 (MQ=255) aTAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGATTTGAACCAACGACCTTCGGGTTATGAGcc > 4:94874/1‑149 (MQ=255) aTAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTAAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGCGCTGGATTTGAACCAACGACCTTCGGGTTATCAGcc > 3:49130/1‑149 (MQ=255) agggaTGGGCGCTTCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGATTTGAACCAACGACCTTCGGGTTATGAGCCcga > 2:313529/5‑149 (MQ=255) ggaTGGGCGCTTCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGATTTGAACCAACGACCTTCGGGTTATGAGCCcgac > 6:69520/3‑148 (MQ=255) aaaTGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGCCGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGATTTGAACCAACGACCTTCGGGTTATGAGCCcgac > 5:92895/1‑148 (MQ=255) aaaTGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGATTTGAACCAACGACCTTCGGGTTATGAGCCcgacg > 2:352226/1‑149 (MQ=255) gCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGATTTGAACCAACGACCTTCGGGTTATGAGCCCGACGAGCTAc < 6:2311/149‑1 (MQ=255) cGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGATTTGAACCAACGACCTTCGGGTTATGAGCCCGACGAGCTAcc < 3:94874/149‑1 (MQ=255) gcgcCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGATTTGAACCAACGACCTTCGGGTTATGAGCCCGACGAGCTACCAAgc < 5:378591/149‑1 (MQ=255) | GAATGCTTACCCTGGGAAACGTATTCGATCCCCCAGCACTGATAGCCCAGACCCTCGACAACCGGGGCCAACAAGGCCTGCAACTGTTCTAGCTTGCTCGACACCTGAACCCCCTCGTGCATGCTGTGCAAATAAAAAATGGGCGAAGCGCCCATCCCTGAAAGCGCCGTAGGACAACGACGCCGAAACT‑‑GTTCGGTTAGCAAAAAGCCCCTGAAAAGGGGCTCCGCTGAAGCTGGTTGCGGGGGCTGGATTTGAACCAACGACCTTCGGGTTATGAGCCCGACGAGCTACCAAGC > NC_002947/5360684‑5360979 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |