| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,373,993 | T→C | 100% | T103A (ACA→GCA) | dapB ← | 4‑hydroxy‑tetrahydrodipicolinate reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,373,993 | 0 | T | C | 97.4% | 252.1 / ‑3.0 | 77 | T103A (ACA→GCA) | dapB | 4‑hydroxy‑tetrahydrodipicolinate reductase |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (35/39); total (37/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
ATTTCGATATCGACATCATCGCCCAGCACCCGCGCAGCCATATCCAGCAGCTTGAGGCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGTAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAGTCGATCAGTACATCGAACTCGTCGGCAACCTTGGCCAGGTCGTCGGACAACAGCACGCC > NC_002947/5373848‑5374137 | atTTCGATATCGACATCATCGCCCAGCACCCGCGCAGCCATATCCAGCAGCTTGAGGCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCaa < 2:104264/148‑1 (MQ=255) ttCGATATCGACATCATCGCCCAGCACCCGCGCAGCCATATCCAGCAGCTTGAGGCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAAc > 3:359874/1‑149 (MQ=255) ttCGATATCGACATCATCGCCCAGCACCCGCGCAGCCATATCCAGCAGCTTGAGGCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAAc > 3:365654/1‑149 (MQ=255) ttCGATATCGACATCATCGCCCAGCACACGCGAAGCGATATCGAGCAGCTTGAGGCTAAGGTTGCCCACCACGATGAAGTTGGCGTCGAACACGAATGGAATGTCCTTGCCAGCCTCAGCCAACAACTCCTTCTC‑TGCGAC‑GTCAAAcc > 6:185383/1‑149 (MQ=255) atatCGACATCATCGCCCAGCACCCGCGCAGCCATATCCAGCAGCTTGAGGCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGTAAAACCGGt < 4:325955/149‑1 (MQ=255) atatCGACATAATCGCCCAGCACCCGCGAAGCCATATCCAGCAGCTTGAGGATAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑ATCGACTGCAAAAACGGt > 2:297232/1‑149 (MQ=255) tatCGCCATCAGCGCCCAGCACCCGCGCAGCCATATCCAGGAGCGTGAGGCTAAGGTTGACCCCCTCGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCTGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTc < 6:297530/149‑1 (MQ=255) tatCGACATCATCGCCCAGCACCCGCGCAGCCATATCCAGCAGCTTGAGGCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTc > 8:208289/1‑149 (MQ=255) tatCGACATCATCGCCCAGCACCCGAGCAGCCATATCCAGCAGCTTGAGGCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCCGCCAACAACTGCTTCTC‑TTCGACTGAAACACCGGTc > 8:213731/1‑149 (MQ=255) cGACATCATCGCCCAGCACCCGCGCAGCCATATCCAGCAGCTTGAGGCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTAGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTg > 5:48508/1‑149 (MQ=255) gACATCATCGCCCAGCACCCGCGCAGCCATATCCAGCAGCTTGAGGCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTg < 3:154374/148‑1 (MQ=255) gACATCATCGCCCAGCACCCGCGCAGCCATATCCAGCAGCTTGAGGCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGc < 4:365654/149‑1 (MQ=255) gACATCATCGCCCAGCACCCGCGCAGCCATATCCAGCAGCTTGAGGCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGc < 4:359874/149‑1 (MQ=255) catcatCGCCCAGCACCCGCGCAGCCATATCCAGCAGCTTGAGGCTAAGGTTGACCCCCTCGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCg < 8:164687/149‑1 (MQ=255) atcGCCCAGCACCCGCGCAGCCATATCCAGCAGCTTGAGGCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCgatga < 2:46719/149‑1 (MQ=255) tcGCCCAGCACCCGCGCAGCCATATCCAGCAGCTTGAGGCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCgatgat > 3:277250/1‑149 (MQ=255) ccGCGCAGCCATATCCAGCAGCTTGAGGCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGc > 3:27165/1‑149 (MQ=255) ccGCGCAGCCATATCCAGCAGCTTGAGGCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGc > 1:144489/1‑149 (MQ=255) ccGCGCAGCCATATCCAGCAGCTTGAGGCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGc > 2:256804/1‑149 (MQ=255) gcAGCCATATCCAGCAGCTTGAGGCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTCTTTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGt < 1:72638/149‑1 (MQ=255) gCCATATCCAGCAGCTTGAGGCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCtt > 4:291693/1‑149 (MQ=255) tatCCAGCAGCTTGAGGCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCtt < 3:191781/136‑1 (MQ=255) tatCCAGCAGCTTGAGGCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCtt > 4:191781/1‑136 (MQ=255) cagcagCTTGAGGCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAg > 5:333134/1‑148 (MQ=255) gcagcTTGAGGCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAc < 4:27165/149‑1 (MQ=255) cTTGAGGCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTTGAATGTCCTTGCCAGCCTCATCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGa < 7:245757/149‑1 (MQ=255) cTTGAGGCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGa < 2:296319/149‑1 (MQ=255) ttGAGGCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAg > 5:85081/1‑149 (MQ=255) ttGAGGCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAg > 3:93695/1‑149 (MQ=255) gAGGCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAgg < 5:378438/148‑1 (MQ=255) gAGGCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAg < 3:291693/147‑1 (MQ=255) agtcTAAGGATGACACCCACGCTGAAGATGGCGGCGAACTCGAATGGAATGTCCTTGCCAGCCTCAGCCAACTACTGCTTCTC‑TTCGACTCCAATACCGGTCGTGCCGATGATCATCTCCTTGGCGTGCTTTCGGCAGAAC‑GCGTGGtt < 2:36933/146‑1 (MQ=255) gCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCATCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCATTGCCGTGCTTGCGGCAGAAC‑GCGAGGtttt > 1:299730/1‑149 (MQ=255) ggTTGACCCCCACGCTGAAGTTGGCGGCTAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAgg < 7:213731/149‑1 (MQ=255) ggTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAgg < 7:208289/149‑1 (MQ=255) gTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAggg > 8:214133/1‑149 (MQ=255) gACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTc < 4:277250/148‑1 (MQ=255) cACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAgg < 8:251748/149‑1 (MQ=255) cACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAgg > 4:149522/1‑149 (MQ=255) cGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGa < 7:53730/149‑1 (MQ=255) aaGTTGGCGGCTAACACGATTCGAATGGCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCTGGCGTGCCGATGATCATCGCCTTGCCCTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGTGGGATGa < 4:211947/147‑1 (MQ=255) aaGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGt < 2:144489/149‑1 (MQ=255) aGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCa > 1:183191/1‑112 (MQ=255) aGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCa < 2:183191/112‑1 (MQ=255) gTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTg > 1:33787/1‑148 (MQ=255) ttGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGaa < 5:294055/149‑1 (MQ=255) gggtgagAACAAGATTGGAATGTCCTTGACAGACTCATCCAACAACTGCTTCTA‑TTCGACTGCAAAACCGCTCGTGCCGATGATCATCGCCTTTCCGTGCTTGAGGAATAAC‑GCGAGGTTTTTCAGGGTAACCGAGGGATGAGTGAAg < 5:185383/142‑1 (MQ=255) ggcggcGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAg > 5:67949/1‑148 (MQ=255) gctgcgAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCAGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAGt < 2:118311/145‑1 (MQ=255) gcggcgAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAGt < 6:333134/148‑1 (MQ=255) ggcgAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAGTCGa > 3:81998/1‑149 (MQ=255) acacGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGACTGAAGTCGATCAGt < 7:318458/149‑1 (MQ=255) gcatGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTGCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAGTCGATCAGTACAt < 8:152958/146‑1 (MQ=255) gATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAGTCGATCAGTACAt > 3:370588/1‑149 (MQ=255) gAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAGTCGATCAGTACATCGaa < 1:256804/148‑1 (MQ=255) aTGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAGTCGATCAGTACATCGAACtc > 7:50141/1‑149 (MQ=255) tGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAGTCGATCAGTACATCGAACtcg > 8:100897/1‑149 (MQ=255) tCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAGTCGATCAGTACATCGAACtcgtc > 5:381963/1‑149 (MQ=255) cTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGGCTTGCCGTGCTTGCGGCAGAACTTCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAGTCGATCAGTACATCGAACtcgtc < 1:297232/148‑1 (MQ=255) gCCTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAGTCGATCAGTACATCGAACTCGTCGGCAACCtt < 6:48508/149‑1 (MQ=255) ccTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAGTCGATCAGTACATCGAACTCGTCGGCAACCTTg < 3:149522/149‑1 (MQ=255) ccTCAGCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAGTCGATCAGTACATCGAACTCGTCGGCAACCTTg < 6:124996/149‑1 (MQ=255) gCCAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAGTCGATCAGTACATCGAACTCGTCGGCAACCTTGGCCAg < 6:85081/149‑1 (MQ=255) ccAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAGTCGATCAGTACATCGAACTCGTCGGCAACCTTGGCCAgg > 7:61017/1‑149 (MQ=255) ccAACAACTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAGTCGATCAGTACATCGAACTCGTCGGCAACCTTGGCCAgg > 7:203449/1‑149 (MQ=255) caacaaCTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAGTCGATCAGTACATCGAACTCGTCGGCAACCTTGGCCAGgt > 3:213687/1‑149 (MQ=255) aacaacTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAGTCGATCAGTACATCGAACTCGTCGGCAACCTTGGCCAGgtc > 7:256884/1‑149 (MQ=255) acTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAGTCGATCAGTACATCGAACTCGTCGGCAACCTTGGCCAGGtcgtcg < 6:67949/149‑1 (MQ=255) cTGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAGTCGATCAGTACATCGAACTCGTCGGCAACCTTGGCCAGGtcgtcg > 3:197479/1‑148 (MQ=255) tGCTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGATGGATGAGTGAAGTCGATCAGTACATCGACCTCGTCGGCAACCTTGGCCAGGTCCTCGGa > 6:244265/1‑149 (MQ=255) cTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAGt < 2:372623/101‑1 (MQ=255) cTTCTC‑TTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAGt > 1:372623/1‑101 (MQ=255) c‑tTCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAGTCGATCAGTACATCGAACTCGTCGGCAACCTTGGCCAGGTCGTCGGACAACAg > 3:30281/1‑148 (MQ=255) ttCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAGTCGATCAGTACATCGAACTCGTCGGCAACCTTGGCCAGGTCGTCGGacaaca < 7:100897/146‑1 (MQ=255) ttCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAGTCGATCAGTACATCGAACTCGTCGGCAACCTTGGCCAGGTCGTCGGACAACAGCa > 6:303487/1‑149 (MQ=255) tCGACTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAGTCGATCAGTACATCGAACTCGTCGGCAACCTTGGCCAGGTCGTCGGACAACAGCAc > 5:384595/1‑149 (MQ=255) aCTGCAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAGTCGATCAGTACATCGAACTCGTCGGCAACCTTGGCCAGGTCGTCGGACAACAGCACGcc < 4:81998/149‑1 (MQ=255) | ATTTCGATATCGACATCATCGCCCAGCACCCGCGCAGCCATATCCAGCAGCTTGAGGCTAAGGTTGACCCCCACGCTGAAGTTGGCGGCGAACACGATTGGAATGTCCTTGCCAGCCTCAGCCAACAACTGCTTCTC‑TTCGACTGTAAAACCGGTCGTGCCGATGATCATCGCCTTGCCGTGCTTGCGGCAGAAC‑GCGAGGTTTTTCAGGGTCACCGAGGGATGAGTGAAGTCGATCAGTACATCGAACTCGTCGGCAACCTTGGCCAGGTCGTCGGACAACAGCACGCC > NC_002947/5373848‑5374137 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |