Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 478,984 | T→C | 6.7% | Q162R (CAG→CGG) ‡ | cca ← | multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 478,984 | 0 | T | C | 6.7% | 308.8 / 8.7 | 104 | Q162R (CAG→CGG) ‡ | cca | multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase |
Reads supporting (aligned to +/- strand): ref base T (47/50); new base C (3/4); total (50/54) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.19e-01 |
Only 100 of 104 total aligned reads displayed.
GAGCTCAGGCAGCAGCTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGATCCAGATCGTTC > NC_002947/478839‑479130 | gAGCTCAGGCAGCAGCTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTgg < 1:124566/148‑1 (MQ=255) gCTCAGGCAGCAGCTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGgcgc < 5:254526/149‑1 (MQ=255) gCTCAGGCAGCAGCTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGgcg > 2:266735/1‑148 (MQ=255) tCAGGCAGCAGCTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGgc < 2:37269/145‑1 (MQ=255) tCAGGCAGCAGCTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGgc > 1:37269/1‑145 (MQ=255) cAGGCAGCAGCTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATc > 7:172651/1‑149 (MQ=255) gcagcaGCTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAgc > 2:221542/1‑149 (MQ=255) cagcagCTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAgcg < 8:281167/149‑1 (MQ=255) agcagcTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATGCGCCAGATCAgcgc < 6:144909/149‑1 (MQ=255) agcagcTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATGCGCCAGATCAgcgc < 8:133857/149‑1 (MQ=255) agcagcTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTCCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAgcgc > 4:289845/1‑149 (MQ=255) cTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAgg > 6:223021/1‑149 (MQ=255) ccTGCAGGGCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGtt > 7:111461/1‑149 (MQ=255) cTGCAGGGCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGttt < 4:77670/149‑1 (MQ=255) cTGCAGGGCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGttt < 5:21423/149‑1 (MQ=255) cAGGGCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCAt < 5:99618/149‑1 (MQ=255) ggCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCaa < 7:263217/138‑1 (MQ=255) ggCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCaa > 8:263217/1‑138 (MQ=255) ggCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCgg > 4:258923/1‑149 (MQ=255) ggCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCgg < 3:285305/149‑1 (MQ=255) ggCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCgg > 7:102055/1‑149 (MQ=255) acacGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAAccc > 6:154400/1‑149 (MQ=255) acacGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAAccc > 3:161220/1‑149 (MQ=255) gcgcTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGaa < 2:183049/149‑1 (MQ=255) gcgcTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGaa < 1:354290/149‑1 (MQ=255) gcTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAAcc > 2:28566/1‑149 (MQ=255) aGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAg < 6:304916/149‑1 (MQ=255) gCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAgt > 6:127689/1‑149 (MQ=255) gCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCACCTGCGCTCGGCAGTGAGGTCCTGCAGTTCGCCTGACGCGCTGATCTGGCGCATCAGCGCCAATGTTTCATCGGCAACCCGGAACCCCAgt < 6:179445/149‑1 (MQ=255) ccTTGAAGAATAGCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAgtggt < 3:289845/149‑1 (MQ=255) ttGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGc > 4:168414/1‑149 (MQ=255) tGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCg > 3:100701/1‑149 (MQ=255) gaagaaTACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGc < 5:154400/147‑1 (MQ=255) aagaaTACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCACCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGt > 3:177664/1‑148 (MQ=255) gaaTACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAAc > 5:90837/1‑149 (MQ=255) gaaTACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAAc > 1:73369/1‑149 (MQ=255) cTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGgcag > 2:249955/1‑149 (MQ=255) cTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGgcag > 6:107729/1‑149 (MQ=255) cGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGgcagc < 2:146187/147‑1 (MQ=255) ggTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCaaa < 7:189772/149‑1 (MQ=255) ggTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCaaa < 3:168414/149‑1 (MQ=255) ttGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGc < 3:328016/149‑1 (MQ=255) gCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCg < 8:102055/148‑1 (MQ=255) cACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑t < 4:207234/148‑1 (MQ=255) cACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTCCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑t < 5:223021/148‑1 (MQ=255) aCTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAgtggt < 6:9479/126‑1 (MQ=255) aCTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑Tg > 7:38739/1‑148 (MQ=255) ttCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCaa > 6:110840/1‑149 (MQ=255) ttCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCaa > 5:170725/1‑149 (MQ=255) aTCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAAcgcg < 2:24056/149‑1 (MQ=255) aTCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAAcgcg > 4:117160/1‑149 (MQ=255) tCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAAcgcg > 1:91807/1‑148 (MQ=255) aGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCgcag < 7:6377/149‑1 (MQ=255) aGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCgca < 8:111461/148‑1 (MQ=255) aGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCACCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCgca < 4:177664/148‑1 (MQ=255) cgcgcTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCAcc < 5:127689/149‑1 (MQ=255) cTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGc > 4:243131/1‑148 (MQ=255) tCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCa > 3:270848/1‑148 (MQ=255) gATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCaaa < 1:249955/148‑1 (MQ=255) gATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCaaa < 5:107729/148‑1 (MQ=255) aTTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAgg < 4:161220/149‑1 (MQ=255) atttcatccAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑a > 5:215735/7‑149 (MQ=255) ttccttccAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑At > 3:102514/1‑149 (MQ=255) cttccAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCt < 8:172651/148‑1 (MQ=255) cttccAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCAGCAAAGG‑ATAtt > 4:97681/1‑149 (MQ=255) ttccAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCTTc > 3:334684/1‑149 (MQ=255) ttccAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCTTc > 7:103667/1‑149 (MQ=255) ccAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCGCTGCAACGCGCAGCACCCGCAAAGG‑ATCtt < 1:28566/147‑1 (MQ=255) cAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGc > 7:199815/1‑98 (MQ=255) cAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGc < 8:199815/98‑1 (MQ=255) cAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCCGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCTTCGGc < 4:26165/149‑1 (MQ=255) tGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCTTCGGCGAAt > 3:119484/1‑149 (MQ=255) cTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGCCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCTTCGGCGAATGCCg < 1:317012/149‑1 (MQ=255) tCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCTTCGGCGAATGCCgg > 6:256052/1‑149 (MQ=255) gCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCTTCGGCGAATGCCgggg > 3:38341/1‑148 (MQ=255) gtgagtgCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCTTCGGCGAATGCCGGGGAAAc < 4:347236/149‑1 (MQ=255) tgagtgCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCTTCGGCGAATGCCGGGGAAACa > 1:63802/1‑149 (MQ=255) agtgCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCTTCGGCGAATGCCGGGGAAACATg < 2:73369/149‑1 (MQ=255) gtgCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCTTCGGCGAATGCCGGGGAAACATgg < 3:117160/149‑1 (MQ=255) gtgCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCTTCGGCGAATGCCGGGGAAACATgg > 4:159887/1‑149 (MQ=255) ccTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑t < 7:5287/95‑1 (MQ=255) ccTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑t > 8:5287/1‑95 (MQ=255) ccTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGGAATCTTCGGCGAATGCCGGGGAAACATGGc < 1:221542/148‑1 (MQ=255) cAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCTTCGGCGAATGCCGGGGAAACATGGCGTAg < 6:90837/147‑1 (MQ=255) cTGAGGCTCTTATCTGGCTCATCAGCGCCAAGGTTTCATCGGCAAGCCGGAACCCCAGTGGTGCGTATCGGGCAGCAAAGAG‑TGCAACGCGCAGCACCCGCAAAGG‑ATGTTCTGCGAATTCCGGGGAAAAATGGCGTAGCATGCGTTGa < 6:215735/149‑1 (MQ=255) cTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGa > 1:355294/1‑149 (MQ=255) cTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGa < 2:63802/149‑1 (MQ=255) ttggCGCTGATGCGCCAGATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGt > 8:5733/3‑144 (MQ=255) ttggCGCTGATGCGCCAGATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGt < 7:5733/142‑1 (MQ=255) ttggCGCTGATGCGCCAGATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGATc > 8:115332/3‑149 (MQ=255) ttggCGCTGATGCGCCAGATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGAGCAGCACCCGCAAAGG‑ATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGATc > 5:227498/3‑149 (MQ=255) aGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGATcc < 4:119484/149‑1 (MQ=255) aGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGATcc < 3:258923/149‑1 (MQ=255) aGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGATcc < 7:59854/149‑1 (MQ=255) ggCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGATc > 8:54401/1‑147 (MQ=255) cgcTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGATCCAGa < 4:100701/149‑1 (MQ=255) gcTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGATc > 6:374261/1‑144 (MQ=255) aTCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGATCCAGATCGtt > 4:325473/1‑149 (MQ=255) aTCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGATCCAGATCGtt > 4:330845/1‑149 (MQ=255) cTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGTAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGATCCAGATCGTTc < 3:243131/148‑1 (MQ=255) | GAGCTCAGGCAGCAGCTCCTGCAGGGCCCCACACGCGCTCAGCACCTTGAAGAATACCTGCGGTTGCACTTCCATCAGCGCGCGCTCGATTTCCTTCCAGCTGCGCTCGGCAGTGAGTGCCTGCAGTTCGCCTGAGGCGCTGATCTGGCGCATCAGCGCCAAGGTTTCATCGGCAACCCGGAACCCCAGTGGTGCGTAACGGGCAGCAAAGCG‑TGCAACGCGCAGCACCCGCAAAGG‑ATCTTCGGCGAATGCCGGGGAAACATGGCGTAGCAGGCGTTGATCCAGATCGTTC > NC_002947/478839‑479130 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |