| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,507,604 | G→C | 8.2% | A289P (GCG→CCG) | cycA → | D‑alanine/beta‑alanine/D‑serine/glycine permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,507,604 | 0 | G | C | 8.2% | 218.3 / 9.6 | 73 | A289P (GCG→CCG) | cycA | D‑alanine/beta‑alanine/D‑serine/glycine permease |
| Reads supporting (aligned to +/- strand): ref base G (30/37); new base C (2/4); total (32/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.89e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.18e-01 | |||||||||||
TGCCGCGGGCGATCAACTCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCGAGAAGCTGTCGAGCCGTTCG > NC_002947/5507458‑5507750 | tGCCGCGGGCGATCAACTCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCcggcg > 1:210793/1‑149 (MQ=255)tGCCGCGGGCGATCAACTCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCcggcg > 3:103282/1‑149 (MQ=255)tGCCGCGGGCGAACAACTCGATCCCGATCCGTATCATCGTGTTCTATGAGCTGGCGCTCATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGGTGGAAGGCTTGCaggcg > 8:290697/1‑149 (MQ=255) gcgGGCGATCAACTCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCcggcggcgg < 6:179996/149‑1 (MQ=255) cgGGCGATCAACTCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCcggcggcgg > 2:361807/1‑148 (MQ=255) gggCGATCAACTCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCggcggcggc > 6:188368/1‑148 (MQ=255) ggCGATCAACTCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCaa < 5:91824/149‑1 (MQ=255) cGATCAACTCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGCCGCCGGCAAGc < 3:285832/149‑1 (MQ=255) aTCAACTCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGcat > 2:220203/1‑149 (MQ=255) aTCAACTCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGCCGCCGGCAAGcct < 4:339074/149‑3 (MQ=255) tCAACTCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGcatc < 1:361807/149‑1 (MQ=255) tCAACTCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATCGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGcat > 1:64831/1‑148 (MQ=255) gatcccgatccGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAAc < 1:192144/148‑1 (MQ=255) gatcccgatccGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACt > 5:106171/1‑149 (MQ=255) ccgatccGTATCATCGGGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCgt < 8:225115/149‑1 (MQ=255) cgatccGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCgtg < 2:210793/149‑1 (MQ=255) cgatccGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCgtg < 8:14835/149‑1 (MQ=255) atccGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCgtggt < 7:241005/149‑1 (MQ=255) ccGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGc < 8:65961/130‑1 (MQ=255) ccGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGc > 7:65961/1‑130 (MQ=255) tATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGa < 1:220203/149‑1 (MQ=255) tcGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTcg > 7:108882/1‑149 (MQ=255) tcGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTcg > 6:373320/1‑149 (MQ=255) tcGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTcg > 5:251266/1‑149 (MQ=255) gtgtTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTcggc > 1:221212/1‑149 (MQ=255) ttCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCggcggc > 8:10/1‑149 (MQ=255) ttCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCggcggc > 5:179734/1‑149 (MQ=255) tATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTtc > 5:145544/1‑149 (MQ=255) gtgCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTtcgtc > 3:188219/1‑149 (MQ=255) tgCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTtcgtcg < 6:337675/149‑1 (MQ=255) cTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCTACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGc < 4:103282/149‑1 (MQ=255) tGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGc > 3:53892/1‑148 (MQ=255) gcgcTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTtcgtcg < 3:46264/144‑1 (MQ=255) gcgcTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTtcgtcg > 4:46264/1‑144 (MQ=255) cgcTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAAc < 5:188368/149‑1 (MQ=255) aTCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAgcgg > 3:163578/1‑149 (MQ=255) gcgATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAgcggcg < 5:373320/148‑1 (MQ=255) gcgATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCgt > 8:245390/1‑149 (MQ=255) gcgATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCgt > 5:283914/1‑149 (MQ=255) cgATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCgtg < 7:10/149‑1 (MQ=255) gATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCCTCAACTTCGTGGTGCTGACGTCGGCGGCTTCGTCGGCCAACCGCGGCgtgt > 6:314852/1‑149 (MQ=255) gATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCgtgt < 7:205783/149‑1 (MQ=255) aTCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGtt < 2:246913/149‑1 (MQ=255) aTCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGtt < 2:252014/149‑1 (MQ=255) aTGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTtct < 5:11199/148‑1 (MQ=255) ggCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTcca > 8:100513/1‑149 (MQ=255) tGACCGCGTGGGTCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGAGGCGGCAAGGATCATCAACTTCGTGGTGGTGACCTCGGCGGCTTCGTCGGCGAACAGCGGCGTGTTCTCCACCAGc < 2:64831/149‑1 (MQ=255) cccGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCa > 5:133080/1‑149 (MQ=255) cGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATg < 6:256228/149‑1 (MQ=255) gTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGc < 7:290697/149‑1 (MQ=255) ggCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGctc < 7:252349/149‑1 (MQ=255) gcgcGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGctct < 4:45747/149‑1 (MQ=255) gcgATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTAc < 8:228258/149‑1 (MQ=255) gcgATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTAc < 2:221212/149‑1 (MQ=255) gATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACgg > 8:35954/1‑149 (MQ=255) gtgCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTc > 2:164695/1‑149 (MQ=255) tgCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCg < 7:8520/149‑1 (MQ=255) ccGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAg > 8:145475/1‑149 (MQ=255) ccGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAg < 1:151878/149‑1 (MQ=255) ggAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAgg > 3:35595/1‑148 (MQ=255) gAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGaa < 6:133080/149‑1 (MQ=255) gCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGAc < 4:53892/149‑1 (MQ=255) ccGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGAcgc < 7:100513/149‑1 (MQ=255) ttcgttGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGcc < 6:251266/149‑1 (MQ=255) gttGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGccc > 8:184869/1‑147 (MQ=255) ttGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAg > 6:110645/1‑149 (MQ=255) aGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTtcgtcg < 2:261264/77‑1 (MQ=255) aGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTtcgtcg > 1:261264/1‑77 (MQ=255) cGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCgag < 7:145475/148‑1 (MQ=255) gTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCgtggt < 2:30989/47‑1 (MQ=255) gTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCgag > 8:191658/1‑147 (MQ=255) cTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCGAGAAGc < 6:283914/148‑1 (MQ=255) tGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCGAGAAGCTg > 3:318654/1‑149 (MQ=255) tGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCGAGAAGCTg < 7:245390/149‑1 (MQ=255) tgCTTGCCGCCGCCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAg > 7:275749/2‑129 (MQ=255) tgCTTGCCGCCGCCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAg < 8:275749/128‑1 (MQ=255) ttGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAACCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCGAGAAGCTGTCGAGCCg > 3:292332/1‑149 (MQ=255) ttGCCGCCGCCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCttt < 5:314636/131‑1 (MQ=255) ttGCCGCCGCCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCttt > 6:314636/1‑131 (MQ=255) cggcggcggCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCGAGAAGCTGTCGAGCCGTTCg < 5:110645/149‑1 (MQ=255) cggcggcggCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCGAGAAGCTGTCGAGCCGTTCg < 7:184869/149‑1 (MQ=255) | TGCCGCGGGCGATCAACTCGATCCCGATCCGTATCATCGTGTTCTATGTGCTGGCGCTGATCGCGATCATGGCCGTGACCCCGTGGCGCGATGTGGTGCCCGGAAAAAGCCCGTTCGTTGAGTTGTTCGTGCTGGCAGGCTTGCCGGCGGCGGCAAGCATCATCAACTTCGTGGTGCTGACCTCGGCGGCTTCGTCGGCCAACAGCGGCGTGTTCTCCACCAGCCGCATGCTCTACGGCCTGTCGCAGGAAGGTGACGCGCCCAAGGCTTTCGAGAAGCTGTCGAGCCGTTCG > NC_002947/5507458‑5507750 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |