| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,566,961 | C→G | 7.4% | L175F (TTG→TTC) | mutL ← | DNA mismatch repair protein MutL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,566,961 | 0 | C | G | 7.4% | 245.8 / 8.8 | 81 | L175F (TTG→TTC) | mutL | DNA mismatch repair protein MutL |
| Reads supporting (aligned to +/- strand): ref base C (40/35); new base G (4/2); total (44/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.46e-01 | |||||||||||
AAGCCCGGGCCGCAGATGGCACCCACCCGCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGCGTCATGTCGCGGCCTTCGGTTTCTAC > NC_002947/5566815‑5567107 | aaGCCCGGGCCGCAGATGGCACCCACCCGCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGc > 1:223992/1‑147 (MQ=255) aGCCCGGGCCGCAGATGGCACCCACCCGCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAg < 1:358741/149‑1 (MQ=255) cGGGCCGCAGATGGCACCCACCCGCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGAt > 3:293603/1‑149 (MQ=255) gggCCGCAGATGGCACCCACCCGCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATc > 7:299937/1‑149 (MQ=255) ctgCCGCATATCGCACCCACCCTCCGGTCACGGGCGATTTCGTCGTGCGCCTCGTGCAGGCTCAGGATCCTCTTGCCATTGGGCCGCAGGTGGAAGCCGACATCGAAACGGGCCACCGCCAGCCGCCGGATCACTTCCTGCAAGTGATc < 6:313303/147‑1 (MQ=255) gCCGCAGATGGCACCCACCCGCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCg > 8:253566/1‑148 (MQ=255) cGCAGATGGCACCCACCCGCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAAt < 8:334837/149‑1 (MQ=255) aGATGGCACCCACCCGGCGTGCAGGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCg < 6:3178/149‑1 (MQ=255) cacccaccCGCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTtc > 8:243519/1‑149 (MQ=255) cacccaccCGCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTtc < 6:145967/149‑1 (MQ=255) ccacccGCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTGCAGGAAGTGATccggc < 8:167319/137‑5 (MQ=255) ccacccGCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTGCAGGAAGTGATccggc > 7:167319/1‑133 (MQ=255) ccacccGCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCg > 5:25960/1‑149 (MQ=255) cacccGCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCgg < 4:293603/149‑1 (MQ=255) cacccGCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCgg < 6:25960/149‑1 (MQ=255) ccgccgTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGa > 4:305701/1‑127 (MQ=255) ccgccgTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGa < 3:305701/127‑1 (MQ=255) ccgTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGa < 5:188208/149‑1 (MQ=255) gggCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTg > 3:62556/1‑149 (MQ=255) ggCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTgc > 4:174232/1‑149 (MQ=255) ggCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTgc > 4:168214/1‑149 (MQ=255) gCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTgcg > 8:132812/1‑149 (MQ=255) cGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACAGCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTgcgc < 7:243519/149‑1 (MQ=255) gtcgtGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCAGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCg > 4:286109/1‑149 (MQ=255) gtGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCggg < 2:179855/148‑1 (MQ=255) gtGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCggg < 2:223992/148‑1 (MQ=255) ggCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTa < 4:62556/148‑1 (MQ=255) ggCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTAt < 7:253566/149‑1 (MQ=255) aaccTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCgggg < 2:183294/144‑1 (MQ=255) cTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTg > 1:126427/1‑148 (MQ=255) cTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTg > 3:220697/1‑148 (MQ=255) gTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTgaag < 5:180813/148‑1 (MQ=255) gTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTgaa < 3:16843/147‑1 (MQ=255) gCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTgaagaa > 2:261358/1‑148 (MQ=255) aGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACa > 3:213927/1‑148 (MQ=255) ggATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATcgcg > 3:222234/1‑148 (MQ=255) ggATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCgcgc < 1:261358/149‑1 (MQ=255) gCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATAACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACtt > 3:148711/1‑149 (MQ=255) ttGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCggg < 7:24440/120‑1 (MQ=255) ttGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCggg > 8:24440/1‑120 (MQ=255) ttGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCAc > 3:193841/1‑149 (MQ=255) gCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGAAATTCAAcc > 1:170102/1‑148 (MQ=255) cATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAg < 4:222234/149‑1 (MQ=255) cATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAg < 4:213927/149‑1 (MQ=255) cATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAg > 8:25844/1‑149 (MQ=255) cATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAg > 5:271184/1‑149 (MQ=255) cATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGCGGTATTGAAGAACAAATCGCGCACTTCCACCGAg > 5:70419/1‑149 (MQ=255) gcatcgcAGGTGGAAGCCGACATCGAAATGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTac < 5:26199/145‑1 (MQ=255) tgGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTacc > 7:123542/1‑149 (MQ=255) tgGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTac < 5:238798/148‑1 (MQ=255) gcgcAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTaccga > 3:119156/1‑149 (MQ=255) cgcAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTaccgac < 4:220697/149‑1 (MQ=255) cgcAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTaccgac > 5:55243/1‑149 (MQ=255) gTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGt < 7:132812/149‑1 (MQ=255) gTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGt < 6:70419/149‑1 (MQ=255) tGGAAGCCGACATCGAACCGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTg < 8:299937/149‑1 (MQ=255) gAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTgcg > 7:261965/1‑149 (MQ=255) gACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGccgccg < 3:174232/149‑1 (MQ=255) gACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGccgccg < 3:168214/149‑1 (MQ=255) aTCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCt < 6:55243/149‑1 (MQ=255) cGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTg > 2:339095/1‑148 (MQ=255) aaaCGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCAc > 7:35104/1‑149 (MQ=255) aaaCGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCAc > 2:101937/1‑149 (MQ=255) aaaCGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCAc > 6:296259/1‑149 (MQ=255) gggCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCcgc < 4:148711/149‑1 (MQ=255) ccagcgccagcCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCgcggc > 2:49670/1‑149 (MQ=255) ccagcgccagcCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCgcggc < 5:85712/149‑1 (MQ=255) cagcgccagcCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGa < 4:176722/62‑1 (MQ=255) cagcgccagcCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGa > 3:176722/1‑62 (MQ=255) agcCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGCGTCATGTc > 3:158403/1‑149 (MQ=255) aattcgATCACTTGCAGGAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGCGTCATGTcgcg > 7:253263/6‑149 (MQ=255) gATCACTTGCAGGAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGCGTCATGTCGCGGCCtt > 5:76019/1‑149 (MQ=255) aTCACTTGCAGGAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGt < 4:199861/109‑1 (MQ=255) aTCACTTGCAGGAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGt > 3:199861/1‑109 (MQ=255) aCTTCCTGCATGTGATCGAATTCTGTTTTCTCGGCTTTTAGGTACTTGCTCCTGGGCGGGTTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCTACCGGGTGCGCCGCCGGCTGCACCCGCGGCGTCATTTAGCGGCCTTCGGt < 5:6765/149‑1 (MQ=255) cTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGCGTCATGTCGCGGCCTTCGGtt > 8:231278/1‑149 (MQ=255) cTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGCGTCATGTCGCGGCCTTCGGt < 3:105327/148‑1 (MQ=255) cTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGCGTCATGTCGCGGCCTTCGGt > 4:105327/1‑148 (MQ=255) ttCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGCGTCATGTCGCGGCCTTCGGttt > 6:167191/1‑149 (MQ=255) ttCCTGCAAGTGATAGAATTAGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCCCCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGAGTCATGTAGCTGCCTTCGGttt > 2:18979/1‑149 (MQ=255) tGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCAGCGGCGTCATGTCGCGGCCTTCGGTTTCTAc > 3:336014/1‑149 (MQ=255) tGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTAATGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGCGTCATGTCGCGGCCTTCGGTTTCTAc > 1:293874/1‑149 (MQ=255) | AAGCCCGGGCCGCAGATGGCACCCACCCGCCGTGCACGGGCGATTTCGTCGTGGGCCTCGTGCAGGCTGAGGATGCTCTTGCCATTGTGGCGCAGGTGGAAGCCGACATCGAAACGGGCCAGCGCCAGCCGCCGGATCACTTCCTGCAAGTGATCGAATTCGGTTTTCTCGGCTTTGAGGAACTTGCGCCTGGCCGGGGTATTGAAGAACAAATCGCGCACTTCCACCGAGGTACCGACCGGGTGCGCCGCCGGCTGCACCCGCGGCGTCATGTCGCGGCCTTCGGTTTCTAC > NC_002947/5566815‑5567107 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |