| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 501,673 | A→T | 7.3% | intergenic (+22/‑39) | PP_0412 → / → PP_0413 | polyamine ABC transportersubstrate‑binding protein/polyamine ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 501,673 | 0 | A | T | 7.3% | 215.5 / 7.7 | 83 | intergenic (+22/‑39) | PP_0412/PP_0413 | polyamine ABC transportersubstrate‑binding protein/polyamine ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base A (34/41); new base T (3/3); total (39/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.27e-01 | |||||||||||
GAAGAAAGACATGCCGACCACGCCTGAGAACATTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCAAGCAGCGCCTCAAACACGCCGAGCGGGTCAACCGCTGGAAGGCGCAGGCGTTGATCGCGCCGC > NC_002947/501528‑501820 | gaagaaAGACATGCCGACCACGCCTGAGAACATTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAg > 1:135385/1‑149 (MQ=255)gaagaaAGACATGCCGACCACGCCTGAGAACATTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAg > 1:165624/1‑149 (MQ=255) aagaaagaCATGCCGACCACGCATGAGAACATTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGAGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCACTGTGTGGGGCCGCAAAg > 2:340488/1‑148 (MQ=255) gaaagaCATGCCGACCACGCCTGAGAACATTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCgg < 5:183338/149‑1 (MQ=255) aagaCATGCCGACCACGCCTGAGAACATTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGc < 2:135385/148‑1 (MQ=255) aCATGCCGACCACGCCTGAGAACATTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGccccc < 1:351191/149‑1 (MQ=255) cATGCCGACCACGCCTGAGAACATTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCTTTGCGGccccac < 8:266642/149‑3 (MQ=255) aTGCCGACCACGCCTGAGAACATTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCaa < 8:184838/149‑1 (MQ=255) aTGCCGACCACGCCTGAGAACATTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCa > 5:47188/1‑148 (MQ=255) aTGCCGACCACGCCTGAGAACATTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCa > 7:184838/1‑148 (MQ=255) gACCACGCCTGAGAACATTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGGAAAGCGGCCCCCAATTGAg > 4:240956/1‑149 (MQ=255) gACCACGCCTGAGAACATTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAg < 3:57818/149‑1 (MQ=255) aCCACGCCTGAGAACATTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCTACGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAg < 1:293116/149‑1 (MQ=255) aCCACGCCTGAGAACATTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGc > 4:304289/1‑149 (MQ=255) aCCACGCCTGAGAACATTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGc > 3:340565/1‑149 (MQ=255) ccACGCCTGAGAACATTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGcc < 8:136328/149‑1 (MQ=255) gCCTGAGAACATTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAACGCCGCCCCCCATTCAGCCTGTa > 8:175324/1‑149 (MQ=255) gCCTGAGAACATTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTa < 1:52729/149‑1 (MQ=255) cTGAGAACATTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTAtt > 3:73264/1‑149 (MQ=255) gagaACATTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCAAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAg > 4:290481/1‑124 (MQ=255) gagaACATTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCAAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAg < 3:290481/124‑1 (MQ=255) agaACATTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGc < 2:165624/148‑1 (MQ=255) aaCATTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCTTTGCGGccc > 4:31053/1‑127 (MQ=255) aaCATTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCTTTGCGGccc < 3:31053/127‑1 (MQ=255) aCATTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGa < 3:288362/148‑1 (MQ=255) aCATTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGa < 6:47188/148‑1 (MQ=255) aTTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGtt > 4:284235/1‑149 (MQ=255) tGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCg > 5:353008/1‑149 (MQ=255) gCCAACCACGTGCAGAGCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCg < 4:224096/148‑1 (MQ=255) ccAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGcc < 5:213972/149‑1 (MQ=255) aaCCAGGTTCTGATCGACGTGGCGTTCTGGGCCGACAAGAGCGAGGAGCTGGAGCATCGTTTCAAGGGCT‑TGGCGGCGAAGAATTAAACGTCCAGTTTGTTGGGCCGCAAAGCGGCCCCGAATTCAGCCTGTTTTGCGGAGTTCGCCAt < 4:73264/149‑1 (MQ=255) aaCCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCAt > 3:165278/1‑149 (MQ=255) aCCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATg < 3:264915/149‑1 (MQ=255) cAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGa < 6:196260/137‑1 (MQ=255) cAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGc > 1:331988/1‑149 (MQ=255) cAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTAAGCCTGTATTGCGGa > 5:196260/1‑137 (MQ=255) gCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTg > 6:139223/1‑149 (MQ=255) cAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGc < 8:55133/149‑1 (MQ=255) cAGATCGACGTCGCGTTCTGGCCCGAAAACAGCTAGCATCTGGAGCAACTCTTCAACGCCT‑TTGAGGCGAAGAAGTAAACGTCCAGTGTTTGGGTCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGTAGTTCGCCATGGCCATTg < 6:378765/148‑1 (MQ=255) aGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCa < 1:319125/149‑1 (MQ=255) aGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCa < 8:179572/149‑1 (MQ=255) aTCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGt < 4:165278/149‑1 (MQ=255) tCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTg < 7:340805/149‑1 (MQ=255) gCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCaa < 1:373560/149‑1 (MQ=255) gCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCaa < 3:304289/149‑1 (MQ=255) ttCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACg > 6:361660/1‑148 (MQ=255) gggCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCCAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACCAAGgc > 5:379914/1‑149 (MQ=255) ggCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAg < 5:139223/146‑1 (MQ=255) acaacaGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGt > 8:101964/1‑149 (MQ=255) cagcTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCaa < 2:331988/149‑1 (MQ=255) gAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCAagcagc < 4:340565/148‑1 (MQ=255) gAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCAagcag < 3:284235/147‑1 (MQ=255) gCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCCAAGCGGCCCCCAAATAAGCCGGGATTGGGGGGTTGGCCCAGGCCCATGGCGTTCCCCGCCACGCAGGCGCCGGGGCAACTCTCAagcacccgc > 4:172021/1‑144 (MQ=255) aaCGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAACGGCCCCCAATTCAGCCTGTATTTAGGAGTTCGCCATGGCCATTGAAGTGCCCCACAACGAAGGCGCAGGTCCAAATCTCAAGAAgcgcgt > 2:131032/1‑146 (MQ=255) cTTCAACGCCT‑GGGCTTTGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCAAGCAGCGCCTCAAac < 1:131032/149‑1 (MQ=255) gcgAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCAAGCAGCGCCTCAAACACGCCGAGCGGGTCaa > 1:18138/1‑149 (MQ=255) cgAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCAAGCAGCGCCTCAAACACGCCGAGCGGGTCAAc > 5:181332/1‑149 (MQ=255) gaagaaGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTcc > 5:375593/1‑108 (MQ=255) gaagaaGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTcc < 6:375593/108‑1 (MQ=255) gaagaaGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCAAGCAGCGCCTCAAACACGCCGAGCGGGTCAAcc > 8:209125/1‑149 (MQ=255) gaagaaGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTAAGCCTGTATTGCGGAGTTAGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCAAGCAGCGCCTCAAACACGCCGAGCGGGTCAAcc > 4:333814/1‑149 (MQ=255) gaagaaGTAAACGTCCAGTGTGCGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCAAGCAGCGCCTCAAACACGCCGAGCGGGTCAAcc < 6:221129/149‑1 (MQ=255) gaagTAAACGTCCAGTGTGTGGCGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCAAGCAGCGCCTCAAACACGCCGAGCGGGTCAACCGCt < 3:170251/149‑1 (MQ=255) agTAAACGTGCAGTGTGTGGGGCCGCAAAGCGTCCCCCAATTCAGCCTGTATTGCGTAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCAAGCAGCGCCTCAAACACGCCGAGCGGGTCAACCGc < 5:313729/146‑1 (MQ=255) agTAAACGTCCAGTGTGTGGGGCCGCAAACCGGCCACCAAATCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCAGAAACGAATGCGCATGGACAAGTCTCAAGCAGCCCCACAAACCCGACGAGAGGGAAAACCGc > 6:313729/1‑146 (MQ=255) gTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTAAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCAAGCAGCGCCTCAAACACGCCGAGCGGGTCAACCGCTgg > 3:26135/1‑148 (MQ=255) tAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAAATCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCACAACGAAGGCGCAGGTCCAAGTCTCAAGCAGCGCCTCAAACACGCCCAGCGGGTCAACCGCTgg > 5:226080/1‑147 (MQ=255) aaaCGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCAAGCAGCGCCTCAAACACGCCGAGCGGGTCAACCGCTGGAAg > 2:73956/1‑149 (MQ=255) aaCGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCAAGCAGCGCCTCAAACACGCCGAGCGGGTCAACCGCTGGAAg < 7:175324/148‑1 (MQ=255) cAGTGTGTGGGGCCGCAAAGCTGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCAAGCAGCGCCTCAAACACGCCGAGCGGGTCAACCGCTGGAAGGCGCAg < 4:100241/148‑1 (MQ=255) cAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCAAGCAGCGCCTCAAACACGCCGAGCGGGTCAACCGCTGGAAGGCGCAg < 1:68279/148‑1 (MQ=255) tgaattgggggCCGCTTTGCGG‑CCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCAAGCAGCGCCTCAAACACGCCGAGCGGGTCAACCGCTGGAAGGCGCAGGCg > 5:292804/8‑149 (MQ=255) tgtgGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCAAGCAGCGCCTCAAACACGCCGAGCGGGTCAACCGCTGGAAGGCGCAGGCGtt < 6:353008/148‑1 (MQ=255) ggggCCGCTTTGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCAAGCAGCGCCTCAAACACGCCGAGCGGGTCAACCGCTGGAAGGCGCa > 6:307094/1‑139 (MQ=255) ggggCCGCTTTGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCAAGCAGCGCCTCAAACACGCCGAGCGGGTCAACCGCTGGAAGGCGCa < 5:307094/139‑1 (MQ=255) gggCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCAAGCAGCGCCTCAAACACGCCGAGCGGGTCAACCGCTGGAAGGCGCAGGCGTTTATcg < 6:181332/149‑1 (MQ=255) gggCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCAAGCAGCGCCTCAAACACGCCGAGCGGGTCAACCGCTGGAAGGCGCAGGCGTTGATcg > 5:216725/1‑149 (MQ=255) gggCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCAAGCAGCGCCTCAAACACGCCGAGCGGGTCAACCGCTGGAAGGCGCAGGCGTTGATcg < 7:209125/149‑1 (MQ=255) cGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCAAGCAGCGCCTCAAACACGCCGAGCGGGTCAACCGCTGGAAGGCGCAGGCGTTGATCGcgcc > 5:296828/1‑149 (MQ=255) cGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCAAGCAGCGCCTCAAACACGCCGAGCGGGTCAACCGCTGGAAGGCGCAGGCGTTGATCGcgcc > 3:227702/1‑149 (MQ=255) gCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCAAGCAGCGCCTCAAACACGCCGAGCGGGTCAACCGCTGGAAGGCGCAGGCGTTGATCGcgccg > 3:55787/1‑149 (MQ=255) gCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCAAGCAGCGCCTCAAACACGCCGAGCGGGTCAACCGCTGGAAGGCGCAGGCGTTGATCGcgccg > 4:339263/1‑149 (MQ=255) cAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCAAGCAGCGCCTCAAACACGCCGAGCGGGTCAACCGCTGGAAGGCGCAGGCGTTGATCGcgccgc < 3:240956/149‑1 (MQ=255) | GAAGAAAGACATGCCGACCACGCCTGAGAACATTGCCAACCAGGTGCAGATCGACGTGGCGTTCTGGGCCGACAACAGCGAGCAGCTGGAGCAACGCTTCAACGCCT‑GGGCGGCGAAGAAGTAAACGTCCAGTGTGTGGGGCCGCAAAGCGGCCCCCAATTCAGCCTGTATTGCGGAGTTCGCCATGGCCATTGCAGTGCCCCTCAACGAAGGCGCAGGTCCAAGTCTCAAGCAGCGCCTCAAACACGCCGAGCGGGTCAACCGCTGGAAGGCGCAGGCGTTGATCGCGCCGC > NC_002947/501528‑501820 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |