Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 5,641,187 | G→C | 7.0% | A284P (GCG→CCG) | PP_4951 → | EmrB/QacA family drug resistance transporter |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 5,641,187 | 0 | G | C | 7.0% | 224.2 / 4.3 | 70 | A284P (GCG→CCG) | PP_4951 | EmrB/QacA family drug resistance transporter |
Reads supporting (aligned to +/- strand): ref base G (32/33); new base C (3/2); total (35/35) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
GCTGCTGTTCGCCGGCATGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCATGAGCATGATCCCGCTGG‑‑CGGCGGCGGCCATGCTGGCCAAATCCATTGCCCGACCGCTGATCGAACGGTTCGGCTATCGCAT > NC_002947/5641039‑5641335 | gctgctGTTCGCCGGCATGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAgcggcg > 6:50391/1‑149 (MQ=255) gctgTTCGCCGGCATGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGgcgcgc > 1:156573/1‑149 (MQ=255) gctgTTCGCCGGCATGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGACCGCCTGGGCAGCGgcgcgc > 7:276204/1‑149 (MQ=255) tgTTCGCCGGCATGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTg < 4:262086/149‑1 (MQ=255) gTTCGCCGGCATGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGCGCCGCTGc > 4:317658/1‑149 (MQ=255) ttCGCCGGCATGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCGAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGcc > 5:273993/1‑149 (MQ=255) ttCGCCGGCATGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGcc > 4:36340/1‑149 (MQ=255) gCCGGCATGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGCGCCGCTGccca < 3:317658/148‑3 (MQ=255) cGGCATGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGCGCCGCTGccc > 8:43014/1‑144 (MQ=255) cGGCATGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGCGCCGCTGccc < 7:43014/145‑2 (MQ=255) aTGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGt < 5:243573/149‑1 (MQ=255) aTGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGt > 7:326111/1‑149 (MQ=255) aTGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGt < 3:298679/149‑1 (MQ=255) tGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTg < 2:156573/149‑1 (MQ=255) ggCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGc > 3:312495/1‑149 (MQ=255) cctgcctgGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCa > 2:316792/1‑149 (MQ=255) cctgGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCAtt < 5:363251/147‑1 (MQ=255) ctgGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATtgct > 8:205468/1‑149 (MQ=255) ctgGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATtgct < 4:312495/149‑1 (MQ=255) ctgGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATtgct < 2:121322/149‑1 (MQ=255) gCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATtgctgct > 1:336835/1‑149 (MQ=255) gCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATtgctg < 5:352495/147‑1 (MQ=255) cgcgTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATtgctgctgc < 3:172744/149‑1 (MQ=255) cgcgTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATtgctgctgc < 3:178606/149‑1 (MQ=255) gcgTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATtgctgctg > 1:301188/1‑147 (MQ=255) gTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAgg < 2:180371/149‑1 (MQ=255) tACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGt < 4:137214/149‑1 (MQ=255) aCTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGtt > 1:284040/1‑149 (MQ=255) gCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTgcgc > 2:104127/1‑149 (MQ=255) gCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTgcg < 1:101946/148‑1 (MQ=255) gcgcgcCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTgg < 2:284040/149‑1 (MQ=255) cgcgcCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGGTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTg < 2:313518/147‑1 (MQ=255) gcCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTa > 3:162782/1‑149 (MQ=255) cGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACt < 6:261546/149‑1 (MQ=255) cgcgACCCGGAGCCGCTGTGCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCAcc < 6:49456/149‑1 (MQ=255) cgagACACGGAGCCGCGGTTCTCGCCAAGCCTGTTCCGCTTGCGTACTTTCGCCATAGGCATCCTGGGCAACCTGTTCGCCCGCCTTGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCAcc < 6:321642/146‑1 (MQ=255) gACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑c > 6:288183/1‑149 (MQ=255) aCCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑cc < 4:353772/149‑1 (MQ=255) cccGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGtt < 8:34890/102‑1 (MQ=255) cccGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGtt > 7:34890/1‑102 (MQ=255) ccGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑cc > 1:350062/1‑147 (MQ=255) ttCTCGCCAAGCCTGTTCCTCGTGCGTACTTTCGCGATCGTCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCTGCGCGCTGCCGTTCCTGGTGCCATTGCTTCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGgcatgag < 3:66251/149‑1 (MQ=255) gCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGgcatgagcatga > 2:352470/1‑149 (MQ=255) cAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCATGAGCATGATc > 6:261450/1‑149 (MQ=255) aaGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTCGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGgcatgagcacctcgt > 7:170425/1‑143 (MQ=255) ttCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCATGAGCATGATCCCGCTgg‑‑c < 8:242005/149‑1 (MQ=255) cgtACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCAGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCATGAGCATGATCCCGCTgg‑‑cggcggcggc < 1:316792/149‑1 (MQ=255) gtACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCATGAGCATGATCCCGCTgg‑‑cggcggcggc > 5:193187/1‑148 (MQ=255) tACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCATGAGCATGATCCCGCTGG‑‑CGGCGGCGGCCa > 2:178655/1‑149 (MQ=255) tttCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCATGAGCATGATCCCGCTGG‑‑CGGCGGCGGCCATGc > 2:215921/1‑149 (MQ=255) tttCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCATGAGCACGATCCCGCTGG‑‑CGGCGGCGGCCATGc > 7:118186/1‑149 (MQ=255) tCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGACGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTAGGCTa < 4:149349/94‑1 (MQ=255) ccATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCa < 5:198026/103‑1 (MQ=255) ccATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCa > 6:198026/1‑103 (MQ=255) ccATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCATGAGCATGATCCCGCTGG‑‑CGGCGGCGGCCATGCTGGc > 1:2137/1‑148 (MQ=255) ggCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCATGAGCATGATCCCGCTGG‑‑CGGCGGCGGCCATGCTGGCCAAAt < 5:288183/148‑1 (MQ=255) ccTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCATGAGCATGATCCCGCTGG‑‑CGGCGGCGGCCATGCTGGCCAAATCCATTg > 5:359087/1‑149 (MQ=255) cTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCCTGGCCGGCATGAGCATGATCCCGCTGG‑‑CGGCGGCGGCCATGCTGGCCAAATCCAtt < 1:104127/148‑1 (MQ=255) cTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCATGAGCATGATCCCGCTGG‑‑CGGCGGCGGCCATGCTGGCCAAATCCATTg < 2:2137/148‑1 (MQ=255) cTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCATGAGCATGATCCCGCTGG‑‑CGGCGGCGGCCATGCTGGCCAAATCCATTGc > 1:145839/1‑149 (MQ=255) ggCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCATGAGCATGATCCCGCTGG‑‑CGGCGGCGGCCATGCTGGCCAAATCCATTGccc < 2:350062/148‑1 (MQ=255) gCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCATGAGCATGATCCCGCTGG‑‑CGGCGGCGGCCATGCTGGCCAAATCCATTGCCCGa > 3:95950/1‑149 (MQ=255) cTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCATGAGCATGATCCCGCTGG‑‑CGGCGGCGGCCATGCTGGCCAAATCCATTGCCCGACCGCt > 1:288008/1‑149 (MQ=255) cTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCATGAGCATGATCCCGCTGG‑‑CGGCGGCGGCCATGCTGGCCAAATCCATTGCCCGACCGCt > 5:252872/1‑149 (MQ=255) cgcccgccTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCATGAGCATGATCCCGCTGG‑‑CGGCGGCGGCCATGCTGGCCAAATCCATTGCCCGACCGCTGATc > 5:347024/1‑148 (MQ=255) gcccgccTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCATGAGCATGATCCCGCTGG‑‑CGGCGGCGGCCATGCTGGCCAAATCCATTGCCCGACCGCTGTTCg > 5:4897/1‑148 (MQ=255) cccgccTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCATGAGCATGATCCCGCTGG‑‑CGGCGGCGGCCATGCTGGCCAAATCCATTGCCCGACCGCTGATCGaa > 7:123767/1‑149 (MQ=255) cccgccTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCATGAGCATGATCCCGCTGG‑‑CGGCGGCGGCCATGCTGGCCAAATCCATTGCCCGACCGCTGATCGaa < 2:145839/149‑1 (MQ=255) ccgccTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCATGAGCATGATCCCGCTGG‑‑CGGCGGCGGCCATGCTGGCCAAATCCATTGCCCGACCGCTGATCGAAc < 8:123767/149‑1 (MQ=255) ccgccTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCATGAGCATGATCCCGCTGG‑‑CGGCGGCGGCCATGCTGGCCAAATCCATTGCCCGACCGCTGATCGAAc > 6:44033/1‑149 (MQ=255) ccgccTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCAGGAGCATGATCCCGCTGG‑‑CGGCGGCGGCCATGCTGGCCAAATCCATTGCCCGACCGCTGATCGAAc < 5:261450/149‑1 (MQ=255) aacggCAGCGCGCCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCATGAGCATGATCCCGCTAGTTAAGCGGCGGCCATGCTGGCCAAATCCATTGCCCGACCGCTGATCGAACgg > 1:311469/4‑149 (MQ=255) ggCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCATGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCATGAGCATGATCCCGCTGG‑‑CGGCGGCGGCCATGCTGGCCAAATCCATTGCCCGACCGCTGATCGAACGGTTCg < 1:85390/148‑1 (MQ=255) cggcgCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCATGAGCATGATCCCGCTGG‑‑CGGCGGCGGCCATGCTGGCCAAATCCATTGCCCGACCGCTGATCGAACGGTTCGGCTATc < 1:214490/149‑1 (MQ=255) cggcgCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCATGAGCACGATCCCGCTGG‑‑CGGCGGCGGCCATGCTGGCCAAATCCATTGCCCGACCGCTGATCGAACGGTTCGGCTATc < 8:118186/149‑1 (MQ=255) cgcgagcGGCCGGGCCTGGTGCCATTGCTGCCGCCTGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCCTGAGCATGATCCCGCTGG‑‑CGGCGGCGGCCATGCTGGCCAAATCCATTGCCCGACCGCTGATCGAACGGTTCGGCTAt < 8:276204/146‑1 (MQ=255) gcgcTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCATGAGCATGATCCCGCTGG‑‑CGGCGGCGGCCATGCTGGCCAAATCCATTGCCCGACCGCTGATCGAACGGTTCGGCTATCGcat < 5:50391/149‑1 (MQ=255) | GCTGCTGTTCGCCGGCATGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCG‑CCCAGGCCGGCATGAGCATGATCCCGCTGG‑‑CGGCGGCGGCCATGCTGGCCAAATCCATTGCCCGACCGCTGATCGAACGGTTCGGCTATCGCAT > NC_002947/5641039‑5641335 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |