| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,722,412 | G→C | 8.2% | A269A (GCC→GCG) | PP_5023 ← | amino acid ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,722,412 | 0 | G | C | 8.2% | 226.2 / 8.9 | 73 | A269A (GCC→GCG) | PP_5023 | amino acid ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base G (25/41); new base C (4/2); total (30/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.51e-01 | |||||||||||
TGCGCAAGCCTCCGCTCGAGCCGGCTGGCGATGTGCGACAGCGGCAGGTTGATCAGCAGGTACAGGCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCGGCAAGATCACATGGCGCATCGACTGGCCAGCGTTCAGGCCCAGCGACCGGGCAGC > NC_002947/5722266‑5722552 | tGCGCAAGCCTCCGCTCGAACCGGCTGGCGATGTGCGACAGCGGCAGGTTGATCAGCAGGTACAGGCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGc > 1:175760/1‑149 (MQ=255) cgcAAGCCTCCGCTCGAGCCGGCTGGCGATGTGCGACAGCGGCAGGTTGATCAGCAGGTACAGGCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGa < 5:339145/149‑1 (MQ=255) gCCTCCGCTCGAGCCGGCTGGCGATGTGCGACAGCGGCAGGTTGATCAGCAGGTACAGGCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATCGCCATCAcc < 6:18623/149‑1 (MQ=255) tacGCTCGAGCCGGCTGGCGATGTGCGACAGCGGCAGGTTGATCAGCAGGTACAGGCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGa > 4:332454/3‑148 (MQ=255) tCCGCTCGAGCCGGCTGGCGATGTGCGACAGCGGCAGGTTGATCAGCAGGTACAGGCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGa > 4:361234/1‑148 (MQ=255) cGCTCGAGCCGGCTGGCGATGTGCGACAGCGGCAGGTTGATCAGCAGGTACAGGCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGacac < 5:340813/149‑1 (MQ=255) cGCTCGAGCCCGCTGGCGATGTGCGACAGCGGCAGGTTGATCAGCAGCTACACGCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGacac < 4:231104/149‑1 (MQ=255) cTCGAGCCGGCTGGCGATGTGCGACAGCGGCAGGTTGATCAGCAGGTACAGGCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATCGCCATCACCGaactga < 3:47300/149‑6 (MQ=255) gAGCCGGCTGGCGATGTGCGACAGCGGCAGGTTGATCAGCAGGTACAGGCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGCCACCAGCg > 4:16808/1‑149 (MQ=255) gCCGGCTGGCGATGTGCGACAGCGGCAGGTTGATCAGCAGGTACAGGCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAg < 3:267940/149‑1 (MQ=255) gCCGGCTGGCGATGTGCGACAGCGGCAGGTTGATCAGCAGGTACAGGCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAg < 7:52670/149‑1 (MQ=255) gCGATGTGCGACAGCGGCAGGTTGATCAGCAGGTACAGGCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTTGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCtt < 3:166568/149‑1 (MQ=255) gCGATGTGCGACAGCGGCAGGTTGATCAGCAGGTACAGGCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCtt < 2:233953/149‑1 (MQ=255) gCGATGTGCGACAGCGGCAGGTTGATCAGCAGGTACAGGCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGAACACCGACACCAGCGAGGTGTCCtt < 7:55070/149‑1 (MQ=255) gATGTGCGACAGCAGCAGGTTGATCAGCAGGTACAGGCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGa > 2:339376/1‑149 (MQ=255) aTGTGCGACAGCGGCAGGTTGATCAGCAGGTACAGGCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGAc < 1:285352/149‑1 (MQ=255) gtgCGACAGCGGCAGGTTGATCAGCAGGTACAGGCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCtt < 1:197223/144‑1 (MQ=255) gtgCGACAGCGGCAGGTTGATCAGCAGGTACAGGCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCtt > 2:197223/1‑144 (MQ=255) cGACAGCGGCAGGTTGATCAGCAGGTACAGGCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAgg < 2:361722/148‑1 (MQ=255) gACAGCGGCAGGTTTATCAGCAGGTACAGGCCTGCCACGCAGAACCAGATCTCGAAAGTAGTGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCt < 5:348204/149‑1 (MQ=255) aCAGCGGCAGGTTGATCAGCAGGTACAGGCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCt > 7:4287/1‑148 (MQ=255) aGCGGCAGGTTGATCAGCAGGTACAGGCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCtgat < 7:220331/149‑1 (MQ=255) gCGGCAGGTTGATGAGCAGGTTCAGGCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCtgatg < 1:239059/149‑1 (MQ=255) cAGGGTGATCAGCATGTACAGGCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACt < 5:185670/149‑1 (MQ=255) tCAGCAGGTACAGGCCAGCCACGCAGAACAAGATCTCGAAAGTAGAGAACGAGCTGGTGATAGCCTCAAGGACACTCTTGGTCAGTTCGCTGATTGCGATCACCGACACCAGCGACGTGTCATTGAAAAGGCTGAAGAACTggccggc > 6:31039/1‑148 (MQ=255) agGTACAGGCCTGCCACGCAGAACCAGGTCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑gggg > 4:262375/1‑149 (MQ=255) ggTACAGGCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGc > 3:96152/1‑149 (MQ=255) gTACAGGCCTGCCACGTAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCg > 6:266846/1‑149 (MQ=255) cAGGCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGa < 4:18243/148‑1 (MQ=255) ggCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGc < 8:229384/149‑1 (MQ=255) ggCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGc < 3:285175/149‑1 (MQ=255) gCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑gg < 2:329988/139‑1 (MQ=255) gCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑gg > 1:329988/1‑139 (MQ=255) gCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCa > 3:14373/1‑149 (MQ=255) ccACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCAcgcg < 1:165630/148‑1 (MQ=255) ccACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCATGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACgcgc < 4:66194/149‑1 (MQ=255) aCGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCtt < 8:109390/149‑1 (MQ=255) aGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAg < 8:241847/92‑1 (MQ=255) aGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAg < 3:361234/149‑1 (MQ=255) aGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAg < 1:173509/149‑1 (MQ=255) aGAACCAGATCTCGAAAGTAGAGAACGAGCAGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAg > 7:241847/1‑92 (MQ=255) aCCAGATCTCGAAAGTAGAGACCGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGACTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGcc < 2:296010/149‑1 (MQ=255) cAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTg > 3:168559/1‑149 (MQ=255) gATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCg < 4:168559/149‑1 (MQ=255) tcGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTAATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCGGc > 1:104641/1‑147 (MQ=255) gAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCGGc > 4:161992/1‑145 (MQ=255) gAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCGGCAAg < 1:339376/148‑1 (MQ=255) tAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCGGCAAGATcaca > 2:240492/1‑149 (MQ=255) gaACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCGGCAAGATTACATGgc < 2:172315/149‑1 (MQ=255) gaACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCGGCAAGATCACATGgc < 4:287314/149‑1 (MQ=255) gaACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCGGCAAGATCACATGgc < 1:23316/149‑1 (MQ=255) gaACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCGGCAAGATCACATGgc > 2:23316/1‑149 (MQ=255) aaCGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCGGCAAGATCACATGgcg > 2:83474/1‑149 (MQ=255) aaCGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCGGCAAGATCACATGgcg > 4:191266/1‑149 (MQ=255) aGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCGGCAAGATCACATGGCGCATc < 3:166848/149‑1 (MQ=255) gtgATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCGGCAAGATCACATGGCGCATCGACt < 3:332454/148‑1 (MQ=255) gtgATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCGGCAAGATCACATGGCGCATCGACTg > 2:284906/1‑149 (MQ=255) aCGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCCCGCGCTTGAAGGCCTGCGGCAAGATCACATGGCGCATCGACTGGCCAGCGtt > 7:136636/1‑147 (MQ=255) aCGGCCACTCTTGGTCAGGTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCGGCAAGATCACATGGCGCATCGACTGGCCAGCGtt < 3:262375/147‑1 (MQ=255) cGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCGGCAAGATCACATGGCGCATCGACTGGCCAGCGTTCAg < 2:175760/149‑1 (MQ=255) aCTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCGGCAAGATCACATGGCGCATCGACTGGCCAGCGTTCAGGCCCa < 5:266846/149‑1 (MQ=255) ttGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCGGCAAGATCACATGGCGCATCGACTGGCCAGCGTTCAGGCCCAGc < 8:139736/147‑1 (MQ=255) ttGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCGGCAAGATCACATGGCGCATCGACTGGCCAGCGTTCAGGCCCAGc < 8:4287/147‑1 (MQ=255) ttGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCGGCAAGATCACATGGCGCATCGACTGGCCAGCGTTCAGGCCCAGc < 3:191266/147‑1 (MQ=255) ggTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCGGCAAGATCACATGGCGCATCGACTGGCCAGCGTTCAGCCCCAGCGAcc > 4:43654/1‑149 (MQ=255) tgtCGGTGATCGCCATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCGGCAAGATCACATGGCGCATCGACTGGCCAGCGTTCAGGCCCAGCGACCggg > 1:115296/3‑147 (MQ=255) gTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCGGCAAGATCACATGGCGCATCGACTGGCCAGCGTTCAGGCCCAGCGACCGGGCa < 3:161992/149‑1 (MQ=255) ttCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCGGCAAGATCACATGGCGCATCGACTGGCCAGCGTTCAGGCCCAGCGACCGGGCAg > 8:17982/1‑149 (MQ=255) gtCGGTGATCGCCATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCGGCAAGATCACATGGCGCATCGACTGGCCAGCGTTCAGGCCCAGCGACCGGGCAg > 7:231392/2‑149 (MQ=255) tCGGTGATCGCCATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCGGCAAGATCACATGGCGCATCGACTGGCCAGCGTTCAGGCCCAGCGACCGGGCAGc > 8:187811/1‑149 (MQ=255) cGGTGATCGCCATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCATAGGGCGGAAGCACGCGCTTGAAGGCCTGCGGCAAGATCACATGGCGCATCGACTGGCCAGCGTTCAGGCCCAGCGACCGGGCAGc > 1:302150/1‑149 (MQ=255) gATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCGGCAAGATCACATGgc < 4:144237/104‑1 (MQ=255) gATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCGGCAAGATCACATGgc > 3:144237/1‑104 (MQ=255) | TGCGCAAGCCTCCGCTCGAGCCGGCTGGCGATGTGCGACAGCGGCAGGTTGATCAGCAGGTACAGGCCTGCCACGCAGAACCAGATCTCGAAAGTAGAGAACGAGGTGGTGATAGCCTCACGGCCACTCTTGGTCAGTTCGGTGATGGCGATCACCGACACCAGCGAGGTGTCCTTGACCAGGCTGATGAACTGGCCGGCCA‑GGGGCGGAAGCACGCGCTTGAAGGCCTGCGGCAAGATCACATGGCGCATCGACTGGCCAGCGTTCAGGCCCAGCGACCGGGCAGC > NC_002947/5722266‑5722552 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |