| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,737,599 | G→C | 10.6% | intergenic (‑154/+48) | hutU ← / ← PP_5034 | urocanate hydratase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,737,599 | 0 | G | C | 10.6% | 172.4 / 11.3 | 65 | intergenic (‑154/+48) | hutU/PP_5034 | urocanate hydratase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (22/36); new base C (3/4); total (25/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.63e-01 | |||||||||||
GGTCCTCTGCGGTCGTCCGCGGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAGCCGCAAGCAGTCGAACAACC > NC_002947/5737452‑5737741 | ggTCCTCTGCGGTCGTCCGCGGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTAAAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCcgcgc > 5:383833/1‑149 (MQ=255) gTCCTCTGCGGTCGTCCGCGGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCcgcgcg < 2:342988/149‑1 (MQ=255) ccTCTGCGGTCGTCCGCGGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCgcggg > 6:21016/1‑149 (MQ=255) cGGTCGTCCGCGGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTACTCGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCgcgggcg < 1:282898/146‑1 (MQ=255) aggTCGTCCGCGGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTAG‑CGTTCCTGGCTTGAGATTTATTTTGGGGTATAGATCGAGCGCCGCCCGCGCGgcgc < 8:18945/148‑1 (MQ=255) ggTCGTCCGCGGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCt > 5:132088/1‑149 (MQ=255) tcgtcCGCGGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTAATTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑g < 8:322807/149‑1 (MQ=255) gtcCGCGGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑t > 3:200954/1‑149 (MQ=255) gtcCGCGGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCCCGCGCGGCGCTC‑‑GA‑t < 4:95909/149‑1 (MQ=255) tcCGCGGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑tc > 6:144982/1‑149 (MQ=255) cgcgGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑tct > 2:376461/1‑148 (MQ=255) cgcgGGCGGGTATGGCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTCC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑tctc < 1:243829/149‑1 (MQ=255) gggTATGTCGTGTTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCCCGCGCGGCGCTC‑‑gg < 6:134363/138‑2 (MQ=255) ggTATGTCGTCGTGAATATACTATCACAACTTTACTTGTATGTAAATGGATGGAAAAACAAAATAATGGGTCGTTAG‑CGTTACTGGCTTGAGATTTATGTTGGTGTATAGATCGTGCGCCGCGCGGGCTGCTCTC‑‑GA‑TCTCACAGgcgc < 4:291258/149‑1 (MQ=255) gTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACCAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCATGAGATTTATGTTTGCGTAAAGATAGAGCCCCGCGCGGGCGGCCCTC‑‑GA‑TCTCACAGgcgc > 7:274726/1‑148 (MQ=255) tCGTTGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACGTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCaaaa < 5:184256/148‑1 (MQ=255) tCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCaaaaa > 5:29069/1‑149 (MQ=255) aaTATACAAACACACCTTTACTTGTATTTACAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGc < 3:332236/149‑1 (MQ=255) aaTATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGAACTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGc < 3:337674/149‑1 (MQ=255) taCAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTACTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGaa > 2:108175/1‑149 (MQ=255) aCAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTc < 8:109429/116‑1 (MQ=255) aCAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTc > 7:109429/1‑116 (MQ=255) cAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAAcc < 7:209379/149‑1 (MQ=255) cAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAAcc > 7:87694/1‑149 (MQ=255) aaaCACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCt > 7:30867/1‑149 (MQ=255) aaCACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCtt < 6:383833/149‑1 (MQ=255) cacacCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCa < 4:270182/149‑1 (MQ=255) cacCTTTTCTTGTATGTTCAAGCATGGTCAACCAAAATAATTGGAACTTTC‑CGTTCCTGGCTTGAGATTTATTTTTGGGTATAGATCGAGCGGCGCGCGGGCGGCGCTC‑‑GATTCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAg < 1:253275/149‑1 (MQ=255) cacCTTTACTTGTATGCACAAGCATGGACAACCAAAATAATCGTACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAgc < 6:191613/149‑1 (MQ=255) acCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAgcg < 4:200954/149‑1 (MQ=255) ccTTTACTTGTTTGTACTAGCATGGACATCCAAATTAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGTGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCTCAGGCGCCAAAAATCTACAGCCGAACCTTCAgcgc < 3:120990/149‑1 (MQ=39) cTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGcc > 8:225806/1‑149 (MQ=255) cTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTACCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAAACTACAGCCGAACATTCAgcgca > 4:176521/1‑148 (MQ=255) cTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATc < 8:148721/148‑1 (MQ=255) cTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCa < 8:30867/149‑1 (MQ=255) ttGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATc > 3:150660/1‑147 (MQ=255) gtatgtaCAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAg < 8:87694/148‑1 (MQ=255) tatgtaCAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGtt > 2:61700/1‑149 (MQ=255) taCAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGa < 8:623/148‑1 (MQ=255) taCAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGa < 1:61700/148‑1 (MQ=255) taCAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGa < 5:144982/148‑1 (MQ=255) cAAGCATGGACAACCAAAATAATCTTACCTTAC‑CGTTACTGGCTTGAGATTTATGTAGGGGTATAGATCGATCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCa < 8:5067/149‑1 (MQ=39) cAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATc < 7:84370/148‑1 (MQ=255) aaGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATc < 1:192909/137‑1 (MQ=255) aaGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATc > 2:192909/1‑137 (MQ=255) tcATGGACAACCAAAATAATCGGAACTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATAGAGCGCCGCGCGGGCGGCGCTCTTGA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAg < 1:108175/148‑1 (MQ=255) tatgtcgaaCCAAAATACTCGTACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGgc < 8:352470/141‑1 (MQ=255) tGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGgcag > 4:131289/1‑148 (MQ=255) tGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTAGAGATTTATGTTGGGGTATAGAACGAGCGCCGCGCGGGCGCCGCTC‑‑GA‑TATCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGAGCCCATAAAGTAGGATCAGgc > 7:352470/1‑146 (MQ=255) aaaaTAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCt < 3:131289/149‑1 (MQ=255) aaaaTAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCt > 7:108928/1‑149 (MQ=255) aaaTAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTg > 7:185488/1‑149 (MQ=255) ataatCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGca < 7:225806/149‑1 (MQ=255) ccTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGcc < 1:376461/149‑1 (MQ=255) c‑cGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCATAACCAGCCCCAg < 2:4809/148‑1 (MQ=255) c‑cGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAg < 5:21016/148‑1 (MQ=255) gCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATtcatca < 8:108928/149‑1 (MQ=255) ttGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCAtt > 7:88345/1‑149 (MQ=255) ttGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATAAtt > 7:311658/1‑149 (MQ=255) tGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTg > 1:331805/1‑149 (MQ=255) gagaTTTATGTTGCGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCTCCAAAAATCTACAGCCGAACCTTCAGCTCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCAtt < 8:274726/147‑1 (MQ=255) gaTTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGAGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCt < 3:176521/149‑1 (MQ=255) aTGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCa < 8:185488/148‑1 (MQ=255) aTGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCa < 6:150526/148‑1 (MQ=255) gATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAGCCGCAAGCAGTc < 6:29069/148‑1 (MQ=255) aTCGAGCGCCGCCCGCGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAGCCGCAAGCAGTCg > 4:53532/1‑148 (MQ=255) cGAGCGCCGCCCGCGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAGCCGCAAGCAGTCGaa > 4:313751/1‑148 (MQ=255) gAGCGCCGCCCGCGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGGGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCTTCATTGCCTTCCAGCCGCAAGCAGTCGaaca > 5:292817/1‑149 (MQ=255) cgccgcCCGCGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAGCCGCAAGCAGTCGAACAAcc < 3:313751/149‑1 (MQ=255) gcgcgGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAGCCGCAAg > 8:303666/1‑132 (MQ=255) gcgcgGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAGCCGCAAg < 7:303666/132‑1 (MQ=255) | GGTCCTCTGCGGTCGTCCGCGGGCGGGTATGTCGTGGTCAATATACAAACACACCTTTACTTGTATGTACAAGCATGGACAACCAAAATAATCGGACCTTAC‑CGTTCCTGGCTTGAGATTTATGTTGGGGTATAGATCGAGCGCCGCGCGGGCGGCGCTC‑‑GA‑TCTCACAGGCGCCAAAAATCTACAGCCGAACCTTCAGCGCCCATCAAGTTCGATCAGGCAGCACCGCCCCTGCACAACCAGCCCCAGCAATTCATCATTGCCTTCCAGCCGCAAGCAGTCGAACAACC > NC_002947/5737452‑5737741 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |