| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 503,831 | A→T | 7.6% | intergenic (+34/‑117) | PP_0414 → / → rpe | polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 503,831 | 0 | A | T | 7.6% | 256.7 / 9.6 | 92 | intergenic (+34/‑117) | PP_0414/rpe | polyamine ABC transporter permease/ribulose‑5‑phosphate 3‑epimerase |
| Reads supporting (aligned to +/- strand): ref base A (46/39); new base T (3/4); total (49/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.38e-01 | |||||||||||
CCGACCATTGCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTATTGCCCCCTCCATTCT > NC_002947/503684‑503979 | ccGACCATTGCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTa > 3:52165/1‑148 (MQ=255)ccGACCATTGCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTa > 5:57578/1‑148 (MQ=255) tGCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCg‑g > 3:345079/1‑147 (MQ=255) gCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑Gaa < 3:296065/148‑1 (MQ=255) gCCGCGGCGGCGACCTTGCGGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑Gaa < 6:259040/148‑1 (MQ=255) ccGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTACCTGTGCCGGCCTCT‑TC‑CGGCTTTAGCCGCGAaga < 6:169236/149‑1 (MQ=38) cgcgGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAagag < 8:283793/149‑1 (MQ=255) gcggcggcgACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGATATGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAgg > 1:315563/1‑149 (MQ=255) cggcggcgACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTGCCGGCCTCT‑TC‑CGGCTTTAGCCGCGAAGAGGc < 6:267854/149‑1 (MQ=38) cggcggcgACCTTGCTGATTGCGTGCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTGCCGGCCTCT‑TC‑CGGCTTTAGCCGCGAAGAGGc < 3:328450/149‑1 (MQ=38) gcggcgACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCg < 4:345079/149‑1 (MQ=255) gcggcgACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCg < 1:350407/149‑1 (MQ=255) ctcgcccTTGCTGATTGCGTTCTCGGGGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TC‑CGGCTTTAGCCGCGAAGAGGCCgg < 5:64105/143‑1 (MQ=38) gACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGcaca < 8:42221/149‑1 (MQ=255) gACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TC‑CGGCTTTAGCCGCGAAGAGGCCgc > 6:64105/1‑144 (MQ=39) aCCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAg < 3:187899/149‑1 (MQ=255) aCCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTAAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCATCT‑TCGCGGCTAAAGCCC‑GAAGAGTCCGTCACAg > 3:259435/1‑149 (MQ=255) ccTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAgg < 6:162101/149‑1 (MQ=255) aTTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTg > 1:97260/1‑149 (MQ=255) gCGTTCTGGGTGTTGTTGCTGCTGCCCCTGTATGGGTGGCGGGGGCTTAGCGATAAGCTGAGCACTCAACCGCCGGATTTTTGATGGCTGGCCGGAACCGGCCTCT‑TCGGGGCTAACGCCG‑CAAGTGGCCGGCACAGGTTGCGTTGGt < 6:57578/148‑1 (MQ=255) gCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGt < 2:97260/148‑1 (MQ=255) gCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGt < 4:52165/148‑1 (MQ=255) gCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTc > 4:89989/1‑149 (MQ=255) cGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTCTCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTc < 1:263260/149‑1 (MQ=255) cGTTCTCGGTGTTGTGGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGACTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTc < 5:301594/148‑1 (MQ=255) gTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGa > 2:231664/1‑149 (MQ=255) gTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGa > 2:156272/1‑149 (MQ=255) ttCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGac < 3:89989/149‑1 (MQ=255) ctcGGTGTTGTTGCTGCTGACCCTGGCGGGGTTGCGTGGGCGTCGCGAGAAGCGTCGCACTCAACAGCCGGCTTGATGATGGCTTGCCGGTACCGGCCTCT‑TCGCGGCAAAAGCCG‑TAAGAGGCCGGCACAGGTTGCGTTGGTCGacac < 4:9642/149‑1 (MQ=255) tcGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGacac > 7:326965/1‑148 (MQ=255) ggTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCa < 4:71562/148‑1 (MQ=255) ttgttgCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTg < 3:130472/148‑1 (MQ=255) ttgttgCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGa < 4:174186/149‑1 (MQ=255) ttgCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATAc < 8:151096/149‑1 (MQ=255) gctgctGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATAcc > 6:33236/1‑148 (MQ=255) tgctgACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCg > 6:92332/1‑102 (MQ=255) tgctgACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCg < 5:92332/102‑1 (MQ=255) gctgACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAAtt > 6:188136/1‑139 (MQ=255) gctgACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAAtt < 5:188136/139‑1 (MQ=255) gctgACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAAt > 4:334592/1‑148 (MQ=255) gACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCaa > 6:3073/1‑144 (MQ=255) gACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCaa < 5:3073/144‑1 (MQ=255) aCCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAgac > 7:338672/1‑147 (MQ=255) aCCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGc < 3:334592/148‑1 (MQ=255) ccTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAGCCCg‑g > 5:124324/1‑96 (MQ=255) ccTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCtt > 4:102659/1‑149 (MQ=255) ccTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCtt > 6:23494/1‑149 (MQ=255) ccTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGAGGATGGCTTGCCTGTACCGGGCTCT‑TAGAGGCTACAGCCG‑GAAGGGGCCGGGACAGGTTGGGTGGGTCGGGAGCAAGTGATACCAATGAgggtg > 8:131824/1‑145 (MQ=255) cTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGTCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCtt > 8:240977/1‑148 (MQ=255) cTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCtt > 4:337790/1‑148 (MQ=255) gAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATc < 4:229640/149‑1 (MQ=255) ggTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCt < 3:337790/148‑1 (MQ=255) gTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGt > 8:61033/1‑109 (MQ=255) gTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGt < 7:61033/109‑1 (MQ=255) gTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCttt > 3:367578/1‑149 (MQ=255) ttGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTc < 5:23494/149‑1 (MQ=255) gCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTcc < 3:238331/148‑1 (MQ=255) cGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCt > 4:25791/1‑149 (MQ=255) gTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATAGCTTGCCTGTACCGGCCTCT‑ACGCGGCTAAAGCCG‑GCAGCGGCCGGAAAAGGGTGCGTTGGTCGACACCAATTGATACCAATCACCCATCATCGCTTTCCCt > 8:136888/1‑148 (MQ=255) tGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGa < 1:156272/149‑1 (MQ=255) tgCGTAGAGAGAAGCTGAGGACTCAACAGCCGGCTTGATTATGGCTTGCCTGTACCGGCCTCT‑TCGGGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGt < 8:326965/148‑1 (MQ=255) gCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAAt < 2:315563/149‑1 (MQ=255) gCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAAt > 3:46606/1‑149 (MQ=255) cGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACATGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTGTCCCTGAGTTACAATg > 8:11741/1‑149 (MQ=255) aGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCg > 4:54886/1‑149 (MQ=255) cTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGaa > 3:175865/1‑149 (MQ=255) aaCAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAAttt > 5:215379/1‑149 (MQ=255) aaCAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAAttt < 7:240977/149‑1 (MQ=255) aaCAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAAttt > 6:346105/1‑149 (MQ=255) aaCAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAAttt < 4:46606/149‑1 (MQ=255) cAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGc > 1:339946/1‑149 (MQ=255) cAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGc < 4:367578/149‑1 (MQ=255) aGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGc > 4:136176/1‑148 (MQ=255) ccGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCa > 7:248443/1‑148 (MQ=255) gatgatGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTGTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTgc > 5:277194/1‑149 (MQ=255) atgatgGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTgcg > 3:313337/1‑149 (MQ=255) tgatgGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACGGGTgcgc > 7:25477/1‑149 (MQ=255) gatgGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTgcgc > 2:163536/1‑148 (MQ=255) gCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAg < 3:102659/147‑1 (MQ=255) cTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGccc > 3:324608/1‑148 (MQ=255) cTGTACCGGCCTCA‑TAGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTAGACACCAATTGATACCAATGAGCCTTCATCGCTTTCCCTGTGTTACAATGCGCGCCACCGTGAAATTGCCAACAGGTGCGCCATGCAGccc > 2:333146/1‑148 (MQ=255) gTACCGGCCTCT‑GCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGCTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTAc < 7:256728/149‑1 (MQ=255) tACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTAc < 1:163536/148‑1 (MQ=255) ccGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGc > 6:265134/1‑148 (MQ=255) ccGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGc > 3:28662/1‑148 (MQ=255) ccGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGc > 3:87860/1‑148 (MQ=255) cGGCCTCT‑TC‑CGGCTTTAGCCGCGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTa > 8:144200/1‑149 (MQ=39) ggCCTCT‑TC‑CGGCTTTAGCCGCGAAGAGGCCGGTACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTAt > 8:234884/1‑149 (MQ=38) t‑tCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTATTGcccc > 3:99371/1‑149 (MQ=255) t‑tCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTATTGcc < 2:339946/147‑1 (MQ=255) gcgGCTAAAGCCG‑GAAGAGGCCGGAACAGGTTGAGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCAACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTATTGCCCCCTc > 2:248262/1‑149 (MQ=255) cgGCTAAAGCCG‑TAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTATTGCCCCCTcc < 7:136888/149‑1 (MQ=255) tAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTATTGCCCCCTCCAtt > 6:4948/1‑148 (MQ=255) tAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTATTGCCCCCTCCATtc > 1:116408/1‑149 (MQ=255) aaaGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTATTGCCCCCTCCATtct > 6:279728/1‑149 (MQ=255) | CCGACCATTGCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCT‑TCGCGGCTAAAGCCG‑GAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGAATTTGCCAACAGGTGCGCCATGCAGCCCTACGCTATTGCCCCCTCCATTCT > NC_002947/503684‑503979 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |