| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,764,801 | A→G | 7.8% | D261G (GAC→GGC) | ctpA → | carboxy‑terminal‑processing protease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,764,801 | 0 | A | G | 7.8% | 252.0 / 9.2 | 90 | D261G (GAC→GGC) | ctpA | carboxy‑terminal‑processing protease |
| Reads supporting (aligned to +/- strand): ref base A (40/43); new base G (5/2); total (45/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.34e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.30e-01 | |||||||||||
TCACCCAGTTCCAGGTCAAGACCGGTGACGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAAT > NC_002947/5764654‑5764948 | tCACCCAGTTCCAGGTCAAGACCGGTGACGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGAc < 7:185446/149‑1 (MQ=255) aCCCAGTTCCAGGTCAAGACCGGTGACGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCa > 8:185352/1‑149 (MQ=255) aCCCAGTTCCAGGTCAAGACCGGTGACGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCa > 6:160086/1‑149 (MQ=255) cccAGTTCCAGGTCAAGACCGGTGACGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCTATCGGCAGTGGAAGTGCCCGACCAc > 2:218776/1‑149 (MQ=255) aGTTCCAGGTCAAGACCGGTGACGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGTCGGCCACTTc < 8:145428/149‑1 (MQ=255) ccAGGTCCAGACCGGTGACGAAGTGGTCAAGGCCCTGGCCAAGCTGAGCAAGGACAACGGAAAGAAGCTGCGCGGGTTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCTACCACTTCCt < 6:196276/147‑1 (MQ=255) ccAGGTCAAGACCGGTGACGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGTCGGCCACTTccac < 5:291677/148‑3 (MQ=255) gTCAAGACCGGTGACGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGTCGGCCACTTccactgccg > 6:235092/1‑142 (MQ=255) aaGACCGGTGACGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAgg > 2:277570/1‑149 (MQ=255) aaGACCGGTGACGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAgg > 2:203563/1‑149 (MQ=255) aaGACCGGTGACGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAgg > 4:48447/1‑149 (MQ=255) gACCGGTGACGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTc < 7:85919/149‑1 (MQ=255) gACCGGTGACGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTc > 3:199135/1‑149 (MQ=255) cGGTGACGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGa < 6:249021/149‑1 (MQ=255) tGACGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGAGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCg > 8:218563/1‑149 (MQ=255) aCGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTc < 1:203563/149‑1 (MQ=255) aCGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTc > 3:21812/1‑149 (MQ=255) gAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTa > 6:322252/1‑149 (MQ=255) aaGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTa > 6:134775/1‑148 (MQ=255) aaGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTa > 3:307279/1‑148 (MQ=255) aaGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTa > 3:115494/1‑148 (MQ=255) aGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCTGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTaca < 1:30980/149‑1 (MQ=255) aGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTaca < 4:115494/149‑1 (MQ=255) gTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTacac < 7:185352/149‑1 (MQ=255) tGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTc > 7:318838/1‑122 (MQ=255) tGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTc < 8:318838/122‑1 (MQ=255) gCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCaaa < 5:322252/149‑1 (MQ=255) gCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCa > 2:59172/1‑147 (MQ=255) cAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAg < 3:48447/149‑1 (MQ=255) cAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAg < 7:258422/149‑1 (MQ=255) cAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAg < 1:277570/149‑1 (MQ=255) cccTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCg > 5:15407/1‑148 (MQ=255) tGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCATAGGTCTGATCGTCTACACCAAAGGcc > 4:247845/1‑144 (MQ=255) tGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGcc < 3:247845/144‑1 (MQ=255) gCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATc < 4:109197/147‑1 (MQ=255) gCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATc < 4:21812/147‑1 (MQ=255) gCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGc > 8:221361/1‑149 (MQ=255) cAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGcc > 1:277292/1‑148 (MQ=255) aaGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCaa > 5:199191/1‑149 (MQ=255) ctcAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCTACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCg < 7:218563/146‑1 (MQ=255) cgcAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACATCAAAGGCCGCATCGCCAACTcc > 1:23431/1‑147 (MQ=255) aaGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTa < 2:188334/119‑1 (MQ=255) aaGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCt > 4:348283/1‑149 (MQ=255) aaGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGAGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTa > 1:188334/1‑119 (MQ=255) ggCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTtctc < 8:305/149‑1 (MQ=255) gCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCg < 6:15407/149‑1 (MQ=255) gaagCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGcc > 8:213822/1‑148 (MQ=255) gCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCAACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGAcc > 1:308005/1‑149 (MQ=255) cgcgGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGc < 2:277292/149‑1 (MQ=255) gcgGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGTGCTGCGTTTCTCGGCCGACCCGGcc < 3:53719/149‑1 (MQ=255) ggggTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGa < 5:134775/149‑1 (MQ=255) tggtgCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGc > 2:248650/1‑148 (MQ=255) gtgCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTTGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCa < 4:39317/148‑1 (MQ=255) gCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAgcg > 6:95518/1‑149 (MQ=255) aCCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGc < 4:199135/149‑1 (MQ=255) aCCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGc > 7:17615/1‑149 (MQ=255) cgcAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACATCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTg < 2:23431/147‑1 (MQ=255) aacaacCCAGGCGGCGTGCTGCAATCGGCATTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCt > 1:34507/1‑149 (MQ=255) aacaacCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCt > 2:94283/1‑149 (MQ=255) aacCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCtggt < 3:280347/149‑1 (MQ=255) aacCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCtggt > 3:257874/1‑149 (MQ=255) acCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCtggtg < 2:34507/149‑1 (MQ=255) acCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCtggtg < 5:160086/149‑1 (MQ=255) cAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTa > 2:206124/1‑149 (MQ=255) cAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTa < 1:248650/149‑1 (MQ=255) aGGCGGCGTGCTTCAATCGGCAGTGTAAGTTGCAGACCAATTCCTGACAAAAGGTCTGATCTTCTACACCAAAGTCCGCATCGCCAACTCCGAGCTTCGTTTCTCGGCCGACCCGGCCGATGCCATCGCGGGAGTGCCGCTGGTGGTAc < 6:202414/149‑1 (MQ=255) aGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTAc > 5:246704/1‑149 (MQ=255) cggcggGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGa < 8:135959/149‑1 (MQ=255) cggcgTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGa > 5:309463/1‑149 (MQ=255) cggcgTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGa < 7:213822/149‑1 (MQ=255) gcgTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATc < 1:337525/149‑1 (MQ=255) gcgTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATc < 1:59172/149‑1 (MQ=255) gTGCTGCAATCGGCGGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCaa > 5:365456/1‑149 (MQ=255) tgctgcAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAAc < 3:83685/149‑1 (MQ=255) ctgcAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACgg < 5:79266/149‑1 (MQ=255) ctgcAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACg < 7:221361/148‑1 (MQ=255) ctgcAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACg < 3:348283/148‑1 (MQ=255) tgcAATCGGCAGTGGAAGTGGCCGACCACTTCCAGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTa > 2:129858/1‑137 (MQ=255) aTCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCa < 6:246704/149‑1 (MQ=255) tcaggAAGTGGTCGGCCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTgcat > 5:79426/4‑149 (MQ=255) tcaggAAGTGGTCGGCCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTgcat > 1:4475/4‑149 (MQ=255) caggAAGTGGTCGGCCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGCCCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGCTCAACGGTGGCAGTgcatc > 4:244463/3‑149 (MQ=255) caggAAGTGGTCGGCCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTgcatc > 6:90623/3‑149 (MQ=255) tGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTgcatcg < 1:206124/149‑1 (MQ=255) aaGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCTACAACGAGCTGCGTTTCTCGGCCGACCCCGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTgcatcggca > 1:298347/1‑149 (MQ=255) gCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAACGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGcatcggcatcgg > 8:161069/1‑148 (MQ=255) gCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGCGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGa < 7:301479/149‑1 (MQ=255) gCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGt > 5:354272/1‑129 (MQ=255) gCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCAGCATCTCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGt < 6:354272/129‑1 (MQ=255) gACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAAt > 4:21988/1‑149 (MQ=255) | TCACCCAGTTCCAGGTCAAGACCGGTGACGAAGTGGGCAAGGCCCTGGCCAAGCTGCGCAAGGACAACGGCAAGAAGCTGCGCGGGGTGGTGCTGGACCTGCGCAACAACCCAGGCGGCGTGCTGCAATCGGCAGTGGAAGTGGCCGACCACTTCCTGACCAAAGGTCTGATCGTCTACACCAAAGGCCGCATCGCCAACTCCGAGCTGCGTTTCTCGGCCGACCCGGCCGATGCCAGCGCGGGCGTGCCGCTGGTGGTACTGATCAACGGTGGCAGTGCATCGGCATCGGAAAT > NC_002947/5764654‑5764948 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |