| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,851,171 | T→A | 6.6% | intergenic (+34/+34) | ilvD → / ← PP_5129 | dihydroxy‑acid dehydratase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,851,171 | 0 | T | A | 6.6% | 230.7 / 3.6 | 81 | intergenic (+34/+34) | ilvD/PP_5129 | dihydroxy‑acid dehydratase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (34/41); new base A (3/3); total (37/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGCCGAGGTCCGTCCACGCAAGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCTTTTTCGAGCAGCGGCACCTACCCCTC > NC_002947/5851026‑5851317 | agccGAGGTCCGTCCACGCAAGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTggg > 2:381058/1‑149 (MQ=255) aGGTCCGTCCACGCGAGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCg < 2:39045/149‑1 (MQ=255) gggccgtccACGCAAGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCgg < 7:303190/146‑1 (MQ=255) gtccgtccACGCAAGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCAGGGCGCCgg < 7:172456/148‑1 (MQ=255) gtccgtccACGCAAGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCAGGGCGCCgg > 8:172456/1‑148 (MQ=255) cgtccACGCAAGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCAGGGCGCCGGttct < 3:206032/149‑3 (MQ=255) gtccACGCAAGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCgggtgtt > 8:84483/1‑144 (MQ=255) gtccACGCAAGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGttttt < 8:149498/149‑1 (MQ=255) gtccACGCAAGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGttttt > 4:127643/1‑149 (MQ=255) cACGCAAGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGCCAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGttttgttt > 5:106054/1‑149 (MQ=255) gCAAGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGAt < 2:74123/149‑1 (MQ=255) ctatgTAACCTCCGCGCTCTTGGCCTATGCCCTGCTGGCCACCTGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGAtt < 8:277270/145‑1 (MQ=255) cAAGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGAtt < 4:22197/149‑1 (MQ=255) aaGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTg < 5:338071/149‑1 (MQ=255) gTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGACGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTGATTGTTCa < 1:254581/149‑1 (MQ=255) gTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGa > 6:317845/1‑143 (MQ=255) gTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGa < 5:317845/143‑1 (MQ=255) gTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGtt > 1:368132/1‑148 (MQ=255) gTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTc < 4:193535/149‑1 (MQ=255) tAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGATGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCa < 1:338700/149‑1 (MQ=255) accaccGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCAtt < 6:27165/149‑1 (MQ=255) accaccGCGCTCAACGCCTATGCCCTGCTGGCCCCCAGTGCCGACAAGGGGGCGGTGCGTAACAAGGCACTGCTGGAAGGCCTCTGAGTTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCAtt < 7:84483/149‑1 (MQ=255) accGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGAc > 5:305954/1‑149 (MQ=255) cgcTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTc < 7:274686/149‑1 (MQ=255) aaGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGGTTTTTTTGATTGTTCATTGCAGGTCACTg > 8:252471/1‑148 (MQ=255) cTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGc > 1:146264/1‑147 (MQ=255) cTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGc > 6:308475/1‑147 (MQ=255) cTATGCCCTGCTGACCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGc > 8:103624/1‑147 (MQ=255) tGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAg < 5:7384/147‑1 (MQ=255) gCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGt < 3:127643/148‑1 (MQ=255) cccTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTgg > 3:327939/1‑149 (MQ=255) ccTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGc > 4:31739/1‑149 (MQ=255) caccaGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATACGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGa < 3:226607/149‑1 (MQ=255) caccaGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGa > 6:80866/1‑149 (MQ=255) accaGTGCCGACAAGGGTGCGGTGCGAAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGAt > 7:96724/1‑149 (MQ=255) tcacccaGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAAc < 1:323978/142‑1 (MQ=255) gACTAGGGTGCGGTGCGTAACAAGGCAATGGTGGAAGGCCTCTGAGGTGCTTTTTGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACAtt < 8:96724/149‑1 (MQ=255) gACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAGAc > 2:323978/1‑146 (MQ=255) gACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACAtt < 4:327939/149‑1 (MQ=255) gACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACAtt < 1:252242/149‑1 (MQ=255) gACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACAtt > 7:304735/1‑149 (MQ=255) cAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGa > 1:334367/1‑149 (MQ=255) aGGGTGCGTTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACa < 5:308475/149‑1 (MQ=255) aGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGa > 2:154188/1‑147 (MQ=255) gggTGCGGTGCGTAACAAGGCAATGATGGAAGGCCTCTGAGGTGCTTTTAGCGTGAATTAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAg > 6:141042/1‑149 (MQ=255) ggtgcgTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTg < 2:29058/149‑1 (MQ=255) tgcgTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGga < 2:368132/149‑1 (MQ=255) gTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGagag < 3:31739/149‑1 (MQ=255) tAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTg < 5:127512/143‑1 (MQ=255) tAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTg > 6:127512/1‑143 (MQ=255) aCAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGa < 7:103624/149‑1 (MQ=255) cAAGGCAATGCTGTAAGGCCTCTGATGTTCTTTTACCGTGAAATAAGAACCGTCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTAAGTGAAGCTAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGAt < 6:377414/149‑1 (MQ=255) aaGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTGGGATCGAAACATTGACAGCTTTTGGAGAGCGAtt > 2:328645/1‑149 (MQ=255) ggCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTcc > 4:137890/1‑149 (MQ=255) gCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTcc > 5:125746/1‑148 (MQ=255) tGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCt < 1:154188/149‑1 (MQ=255) gCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCAt < 7:219767/149‑1 (MQ=255) ccTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATc < 6:305954/149‑1 (MQ=255) ctctGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATc > 1:21607/1‑148 (MQ=255) tctGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCg > 3:275591/1‑148 (MQ=255) tctGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCg > 6:375758/1‑148 (MQ=255) gCTTTTAGCGTGAAATACCAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGCCAGCTCTTGGAGAGCGATTCCAAGGGCCTCGTCATCGAACAGTTTg < 6:106054/149‑1 (MQ=255) cTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGc < 5:375758/149‑1 (MQ=255) cTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGc < 4:275591/149‑1 (MQ=255) ttttAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCt > 7:127268/1‑149 (MQ=255) tAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCttt < 6:125746/148‑1 (MQ=255) gCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCttttt < 1:188480/148‑1 (MQ=255) gCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCTTTTTc > 2:216946/1‑149 (MQ=255) cGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTg < 8:20700/104‑1 (MQ=255) cGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCTTTTTc < 2:146264/148‑1 (MQ=255) gTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTGATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGGTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCTTGTTc > 3:10378/1‑147 (MQ=255) tAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCGAGTCATCGAAGAGTTTGCTTTTTCGAGCAGCg > 5:286102/1‑149 (MQ=255) gAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCTTTTTCGagcagc > 2:59848/1‑145 (MQ=255) gAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCTTTTTCGagcagc < 1:59848/145‑1 (MQ=255) aaCCGGCGCCCAGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCTTTTTCGAGCAGCGGCAc > 3:145890/1‑149 (MQ=255) ccGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTAACAGCTTTTGGGGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCTTTTTCGAGCAGCGGCAcc > 8:87695/1‑148 (MQ=255) ccGGCGCCCAGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCttt > 5:55127/1‑132 (MQ=255) ccGGCGCCCAGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCttt < 6:55127/132‑1 (MQ=255) ccTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGtt > 3:331110/1‑119 (MQ=255) ccTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCTTTTTCGAGCAGCGGCACCTACCcctc < 8:304735/149‑1 (MQ=255) ccTGGGCGCCGGTTTTTTATGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGtt < 4:331110/119‑1 (MQ=255) | AGCCGAGGTCCGTCCACGCAAGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCTTTTTCGAGCAGCGGCACCTACCCCTC > NC_002947/5851026‑5851317 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |