| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,919,685 | C→G | 6.3% | P91A (CCC→GCC) ‡ | PP_5190 → | type II secretion system protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,919,685 | 0 | C | G | 6.3% | 260.0 / 6.4 | 79 | P91A (CCC→GCC) ‡ | PP_5190 | type II secretion system protein |
| Reads supporting (aligned to +/- strand): ref base C (36/38); new base G (2/3); total (38/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
GCCACCCGCTGGAGCACATCGCCGCCTGCAGCCTGGAAAGCCGCCAGCACCCCGGCCAGCCCCTGGACTTGGAGCACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCTTTCCAGGATGACTGGCAGGCCGACCTGGCCCGCAGCCTCGGCCGGTC > NC_002947/5919539‑5919833 | gCCACCCGCTGGAGCACATCGCCGCCTGCAGCCTGGAAAGCCGCCAGCACCCCGGCCAGCCCCTGGACTTGGAGCACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGc < 7:246357/147‑1 (MQ=255) aCCCGCTGGAGCACATCGCCGCCTGCGGCCTGGAAAGCCGCCAGCACCCCGGCCAGCCCCTGGACTTGGAGCACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAg < 3:3572/149‑1 (MQ=255) cccGCTGGAGCACATCGCCGCCTGCAGCCTGGAAAGCCGCCAGCACCCCGGCCAGCCCCTGGACTTGGAGCACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAgg < 1:17560/149‑1 (MQ=255) cccGCTGGAGCACATCGCCGCCTGCAGCCTGGAAAGCCGCCAGCACCCCGGCCAGCCCCTGGACTTGGAGCACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAgg < 2:75622/149‑1 (MQ=255) gAGCACATCGCCGCCTGCAGCCTGGAAAGCCGCCAGCACCCCGGCCAGCCCCTGGACTTGGAGCACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGGGGCAGGTcgag < 6:2505/147‑4 (MQ=255) gAGCACATCGCCGCCTGCAGCCTGGAAAGCCGCCAGCACCCCGGCCAGCCCCTGGACTTGGAGCACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCAcc < 5:23130/147‑1 (MQ=255) aGCACATCGCCGCCTGCAGCCTGGAAAGCCGCCAGCACCCCGGCCAGCCCCTGGACTTGGAGCACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGc < 4:45475/149‑1 (MQ=255) gCACATCGCCGCCTGCAGCCTGGAAAGCCGCCAGCACCCCGGCCAGCCCCTGGACTTGGAGCACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGcc < 7:341718/149‑1 (MQ=255) caTCGCCGCCTGCAGCCTGGAAAGCCGCCAGCACCCCGGCCAGCCCCTGGACTTGGAGCACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTg > 4:7201/1‑148 (MQ=255) cgccTGCAGCCTGGAAAGCCGCCAGCACCCCGGCCAGCCCCTGGACTTGGAGCACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTccc < 1:234204/149‑1 (MQ=255) gccTGCAGCCTGGAAAGCCGCCAGCACCCCGGCCAGCCCCTGGACTTGGAGCACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTcccc < 2:38417/149‑1 (MQ=255) gCCTGGAAAGCCGCCAGCACCCCGGCCAGCCCCTGGACTTGGAGCACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTc < 3:7201/149‑1 (MQ=255) ccTGGAAAGCCGCCAGCACCCCGGCCAGCCCCTGGACTTGGAGCACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCg < 2:332054/149‑1 (MQ=255) tGGAAAGCCGCCAGCACCCCGGCCAGCCCCTGGACTTGGAGCACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCCTCGACCCCAGGCAACTCGACCTGCCCCAGGGCACCAGCCTGATCTCCACAGCAGTCGcc > 8:266730/1‑149 (MQ=255) ggAAACCCGCCAGCACCCCGGCCAGCCCCTGGACTTGGAGCACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGGCCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGccc < 4:288483/149‑1 (MQ=255) aaGCCGCCAGCACCCCGGCCAGCCCCTGGACTTGGAGCACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGGGGCAGGTcgag < 7:17576/121‑4 (MQ=255) aaGCCGCCAGCACCCCGGCCAGCCCCTGGACTTGGAGCACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGGGGCAGGTcgag > 8:17576/1‑118 (MQ=255) cgccAGCACCCCGGCCAGCCACTGGACTTGGAGGACCTTTGCAAGTGGCTGGCAGACAAGGTCGGCCAACCCTACCTGAGCATCGACCCCATGCAACTCGACATGCCCAAGGTCACCAGCCTGATCTCCCCCGCCTTCGCCCAGCGCCa > 8:267481/1‑149 (MQ=255) cAGCACCCCGGCCAGCCCCTGGACTTGGAGCACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACgg > 6:341283/1‑149 (MQ=255) cccGGCCAGCCCCTGGACTTGGAGCACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGCCCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCt > 3:277182/1‑149 (MQ=255) ccGGCCAGCCCCTGGACTTGGAGCACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTc < 6:67077/149‑1 (MQ=255) cAGCCCCTGGACTTGGAGCACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCAtcgt > 1:264649/1‑149 (MQ=255) aGCCCCTGGACTTGGAGCACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCAtcgtc > 3:335758/1‑149 (MQ=255) cccTGGACTTGGAGCACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTcgcg > 5:369412/1‑149 (MQ=255) aCTTGGAGCACCTTTCCCAGTCGCTGTCCGACAAGGTCCGCCAACCCTACCTGCGCATCGACCCCAAGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGAt < 8:315981/149‑1 (MQ=255) ttGGAGCACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCa < 4:362921/127‑1 (MQ=255) ttGGAGCACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCa > 3:362921/1‑127 (MQ=255) ggAGCACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCCGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCt > 6:171465/1‑149 (MQ=255) ggAGCACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCAAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGcc < 2:246219/148‑1 (MQ=255) aGCACCATTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCAACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCAGATCTCCACACCCTACGCCAATCGCCACGGCATCCTCATCGTCGCGGCCGATcccac > 6:103597/1‑146 (MQ=255) cACCTTTGCCAGTGGCTTGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCGCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCa < 6:82226/148‑1 (MQ=255) cACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATcc > 2:325526/1‑124 (MQ=255) cACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATcc < 1:325526/124‑1 (MQ=255) aCCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGc < 5:313033/149‑1 (MQ=255) ccTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGGGGCAGGTcga > 4:19881/1‑79 (MQ=255) ccTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGGGGCAGGTcga < 3:19881/81‑3 (MQ=255) cAGTGGCTGGGAGAGATTGTCGTCCAACCCTACCTGCGCATGGACCCCTTGCAAATCTACCTGCCCCAGGTCACCAGGCTGATCTCCCCATCCTTCGCCCAGCGCCACGGCATCCTCTTCGTGGCGGCCGATGCCTCCAGCGTCACCGt < 2:272592/149‑1 (MQ=255) cAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGGGCATCGACCCCATGCAACTCGACCTGCCCCAGGTAACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGACACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGt > 2:110751/1‑149 (MQ=255) aGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAg < 5:38220/139‑1 (MQ=255) aGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAg > 6:38220/1‑139 (MQ=255) aGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTc < 5:341283/149‑1 (MQ=255) gTGGCTGGCCCACAAGGTCGGCCAACCCTACCTGCGAATAGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGAACTCCCCCCACTTCGCCCAGCGCCACGGCATCCTCAACGTCGCCGCCGATGCCGCCCGCGACACCggac > 6:253061/1‑146 (MQ=255) tggctggcCGACAAGGTCGTCCAACCCTACCTGCGCATCGACCCCATTCAACTCGACCAGCCCCAGGTCACCAGCCTGATCTCCCCAGCCCTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGc < 6:215175/149‑1 (MQ=255) ttggcCGACCTTGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCCCCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAg > 2:19265/2‑149 (MQ=255) tggcCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAgc > 4:372088/1‑149 (MQ=255) gTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCACCAGGTCACCAGCCTGATCTCCCCAGTCTTCGCCCAGCGCCCCGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCttt > 7:156566/1‑149 (MQ=255) tCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCTTTc > 5:17441/1‑149 (MQ=255) gCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCTTTCCAg < 1:219892/149‑1 (MQ=255) ccaaggcTACCTGCTGATCGACCCCATGCATCTCGACCTGCCCCAGGTCACCCGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCTTTCCAgg < 5:103597/143‑1 (MQ=255) ccAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCTTTCCAgg < 2:264649/149‑1 (MQ=255) ccAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCTTTCCAg > 3:22908/1‑148 (MQ=255) ccAACCCATCCTGCGCATCGACCCCAAGCAACACGTCCTGCCCCCGGTCACCAGCCTGATCTCCCCAGGCTTCGCCCTGCTCCACGCCATCCTCATCGTCTCGGCCGATGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCTTTCCa < 8:156566/147‑1 (MQ=255) aCCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCTTTCCAGGATg < 7:271471/149‑1 (MQ=255) cccTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCTTTCCAGGATGa > 3:164056/1‑149 (MQ=255) cTACCTGCGCATCGCCCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGCTGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCTTACCAGGATCACt > 8:98292/1‑149 (MQ=255) cTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACCGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGACACCGTCGCCACCGCCCAGCCTTTCCAGGATCACt > 6:381635/1‑149 (MQ=255) tACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCTTTCCAGGATGACTg > 4:83025/1‑149 (MQ=255) ccTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTcc < 6:120748/55‑1 (MQ=255) ccTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTcc > 5:120748/1‑55 (MQ=255) ccTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCTTTCCAGGATGACTgg < 5:381635/148‑1 (MQ=255) cTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCTTTCCAGGATGACTgg > 2:298571/1‑147 (MQ=255) gcgcATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCTTTCCAGGATGACTGGCAgg > 2:247259/1‑149 (MQ=255) gcATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCg < 6:137494/60‑1 (MQ=255) gcATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCg > 5:137494/1‑60 (MQ=255) cATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCTTTCCAGGATGACTGGCAGGCCg < 1:110751/149‑1 (MQ=255) aTCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTc > 6:33116/1‑111 (MQ=255) aTCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTc < 5:33116/111‑1 (MQ=255) ccccATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCTTTCCAGGATGACTGGCAGGCCGa > 6:91743/1‑144 (MQ=255) ccccATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCTTTCCAGGATGACTGGCAGGCCGa < 5:91743/144‑1 (MQ=255) cATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCTTTCCAGGATGACTGGCAGGCCGACCTGGccc > 1:251217/1‑149 (MQ=255) aTGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCTTTCCAGGATGACTGGCAGGCCGACCTGGCCCg > 6:278224/1‑149 (MQ=255) ggCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCTTTCCAGGATGACTGGCAGGCCGACCTGGCCCGc < 6:369412/148‑1 (MQ=255) cAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCTTTCCAGGATGACTGGCAGGCCGACCTGGCCCGCa < 4:22908/148‑1 (MQ=255) aaCTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCCCCGTCGCCAGCGCCCAGCCTTTCCAGGATGACTGGCAGGCCGACCTGGCCCGCAGc > 3:116120/1‑149 (MQ=255) aaCTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCTTTCCAGGATGACTGGCAGGCCGACCTGGCCCGCAGc > 8:327418/1‑149 (MQ=255) aCTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCTTTCCAGGATGACTGGCa > 8:178582/1‑129 (MQ=255) cTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCTTTCCAGGATGACTGGCAGGCCGACCTGGCCCGCAGCCt > 5:295962/1‑149 (MQ=255) cTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCTTTCCAGGATGACTGGCAGGCCGACCTGGCCCGCAGCCt < 1:298571/149‑1 (MQ=255) gACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCTTTCCAGGATGACTGGCAGGCCGACCTGGCCCGCAGCCTCg < 3:372088/148‑1 (MQ=255) cTGCCCGAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCTTTCCAGGATGACTGGCAGGCCGACCTGGCCCGCAGCCTCGGCCg < 5:71118/149‑1 (MQ=255) ccccAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCACCGCCCAGCCTTTCCAGGATGACTGGCAGGCCGACCTGGCCCGCAGCCTCGGCCGGTc < 1:50585/149‑1 (MQ=255) | GCCACCCGCTGGAGCACATCGCCGCCTGCAGCCTGGAAAGCCGCCAGCACCCCGGCCAGCCCCTGGACTTGGAGCACCTTTGCCAGTGGCTGGCCGACAAGGTCGGCCAACCCTACCTGCGCATCGACCCCATGCAACTCGACCTGCCCCAGGTCACCAGCCTGATCTCCCCAGCCTTCGCCCAGCGCCACGGCATCCTCATCGTCGCGGCCGATGCCTCCAGCGTCACCGTCGCCAGCGCCCAGCCTTTCCAGGATGACTGGCAGGCCGACCTGGCCCGCAGCCTCGGCCGGTC > NC_002947/5919539‑5919833 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |