| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,988,840 | C→T | 21.0% | intergenic (+134/‑412) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,988,840 | 0 | C | T | 21.0% | 160.2 / 32.7 | 76 | intergenic (+134/‑412) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| Reads supporting (aligned to +/- strand): ref base C (22/38); new base T (10/6); total (32/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.80e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
GGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAA > NC_002947/5988694‑5988981 | ggATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTg > 8:303704/1‑149 (MQ=255)ggATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTg < 4:189042/149‑1 (MQ=255) ggACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCAc > 2:194407/1‑149 (MQ=255) ggACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCAc < 1:97158/149‑1 (MQ=255) tGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCt > 6:19425/1‑149 (MQ=255) gCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGa > 8:345142/1‑148 (MQ=255) ctgggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGata < 2:61200‑M2/93‑1 (MQ=255) ttttGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACACGCTCCTACGATTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATc > 4:349281/1‑149 (MQ=255) gtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGcgtc < 2:153853‑M2/100‑1 (MQ=255) gcgcGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGcgtc < 2:239346/149‑1 (MQ=255) gcgcGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGcgtc < 7:303704/149‑1 (MQ=255) gcgcGTGCCGTGAGTGGTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGATAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTTTTCCTGTGGGAGGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGcgtc < 6:313823/149‑1 (MQ=37) gcgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTC‑‑‑‑‑GTacaa < 2:200611‑M2/106‑1 (MQ=255) ccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTC‑‑‑‑‑GTacaaa > 3:151871‑M2/43‑149 (MQ=255) cTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTacaaa > 4:151152/1‑148 (MQ=255) ttGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTacaaac > 1:271777/1‑148 (MQ=255) aGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑Ag < 7:345142/148‑1 (MQ=255) gtgtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGc < 7:98905‑M2/113‑1 (MQ=255) gggTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGc < 6:299194/149‑1 (MQ=255) gggTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGc < 3:151152/149‑1 (MQ=255) gTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCgg < 8:100422/149‑1 (MQ=255) tttcagcgcctgggagatcgagcgccgcccgcgCTGCGCTTCGCGGGTAACCCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGt < 5:326934‑M2/116‑1 (MQ=255) aGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTc < 1:248349/118‑1 (MQ=255) aGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTc > 2:248349/1‑118 (MQ=255) gcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGcgtc < 3:347552‑M2/100‑1 (MQ=255) gcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGcgtc > 4:347552‑M2/29‑128 (MQ=255) gTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTcgcgc < 5:311377/149‑1 (MQ=255) gTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTcgcgc > 1:109951/1‑149 (MQ=255) gTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTcgcgc < 5:306244/149‑1 (MQ=255) gCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTAATCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTcgcgcgc < 2:116677/149‑1 (MQ=255) tgAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGcc < 2:109951/147‑1 (MQ=255) tgAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCt < 4:339551/148‑1 (MQ=255) gagaTTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTCAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTg < 8:296136/148‑1 (MQ=255) gaTTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGca < 6:333502/149‑1 (MQ=255) gaTTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGca > 8:281137/1‑149 (MQ=255) cgcgaagcgccgcgcgggCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGca > 3:106075‑M2/19‑149 (MQ=255) aTTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTcgcgcg < 8:130252/139‑1 (MQ=255) aTTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTcgcgcg > 7:130252/1‑139 (MQ=255) cccgcgCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTg < 1:194407‑M2/143‑1 (MQ=255) ccgcgCGGCGCTTCGCGGGTAAACAAGCTCCTACGTTTGTTTCGGGCCAGTTATTACTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAAAA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTgg > 1:249682‑M2/6‑149 (MQ=255) cgggCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGc < 4:106075‑M2/145‑1 (MQ=255) cgcgCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGc < 3:191662‑M2/145‑1 (MQ=255) cgcTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGaaac < 2:122283/149‑1 (MQ=255) cTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTgg > 3:6406/1‑124 (MQ=255) cTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTgg < 4:6406/124‑1 (MQ=255) ttCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGGGAGTGGCCAGaaacaaa > 8:248139/1‑149 (MQ=255) cgcgGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGGCGCTCGCGCCTGGCACAGGAGGGATTGGCCAGaaacaaac < 7:226569/148‑1 (MQ=255) gcgGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACg < 4:288002/148‑1 (MQ=255) gcgGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACg < 3:349281/148‑1 (MQ=255) cgGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTa < 2:271777/149‑1 (MQ=255) gggTACTCCCGCTCCTACGTGTGTTGCGGGCCAGTTATTCCTTTGTGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGGCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAg < 7:146494/149‑1 (MQ=255) gggTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAg < 8:166407/149‑1 (MQ=255) gggTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGACTggt > 1:296650/1‑118 (MQ=11) gTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCgg > 4:175912/1‑102 (MQ=18) aCCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCgg < 3:185311/149‑1 (MQ=255) aCCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCgg < 7:281137/149‑1 (MQ=255) cccGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCggg < 5:19425/149‑1 (MQ=255) ccGCTCCTAAGTTTGTTTCTGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACTCCTCGATATCGCGTC‑‑‑‑‑GTACAAACC‑AGGCGGTCGCGCGCGCCTTGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGt < 2:249682/149‑1 (MQ=255) tCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGACTGGTGCAGGAGGGACTGGCC‑TAAACAAACGTAGGAGCGGGTTTAcc > 4:59253/1‑149 (MQ=11) cTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGAGGGGGAAAAAGACAGGCGGACGCGCGCGCCTGGCACAGGAGGGATAGGCAAGAAACAAACGTAGGAGCGGGt > 1:122395/1‑149 (MQ=25) cTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAccc < 7:145261‑M2/149‑4 (MQ=255) cTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGGCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAc > 2:154003‑M2/1‑146 (MQ=255) gtttgtttCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCcgcg > 7:167978/1‑147 (MQ=11) gtttgtttCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCcgcg > 1:219909/1‑147 (MQ=11) tttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgc < 2:139377‑M2/149‑13 (MQ=255) tttCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGcgcc > 7:149804/1‑149 (MQ=14) ggCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCcgcgcg > 7:342565/1‑149 (MQ=14) ccAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgg > 1:139377‑M2/1‑130 (MQ=255) attATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCgcgggcgg > 8:324378/2‑149 (MQ=14) ccTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctc < 4:191491‑M2/149‑29 (MQ=255) cgcgCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATg > 8:69166/1‑149 (MQ=255) cgcgCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATg > 1:190334/1‑149 (MQ=255) gcgcACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATgg < 1:306078/149‑1 (MQ=255) gcgcACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATgg > 2:306078/1‑149 (MQ=255) gcACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACaggag > 1:59869/1‑75 (MQ=255) gcACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACaggag < 2:59869/75‑1 (MQ=255) gaccgccttggggCATGTCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaa < 2:69558‑M2/143‑47 (MQ=255) ccTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGaa < 8:206819/76‑1 (MQ=255) ccTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGaa > 7:206819/1‑76 (MQ=255) | GGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAA > NC_002947/5988694‑5988981 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |