| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,988,894 | C→T | 28.8% | intergenic (+188/‑358) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,988,894 | 0 | C | T | 28.8% | 99.6 / 44.3 | 66 | intergenic (+188/‑358) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| Reads supporting (aligned to +/- strand): ref base C (20/27); new base T (10/9); total (30/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.87e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.51e-01 | |||||||||||
GATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGC > NC_002947/5988747‑5989039 | gaTTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGca > 8:281137/1‑149 (MQ=255)gaTTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGca < 6:333502/149‑1 (MQ=255)cgcgaagcgccgcgcgggCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGca > 3:106075‑M2/19‑149 (MQ=255) cccgcgCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTg < 1:194407‑M2/143‑1 (MQ=255) ccgcgCGGCGCTTCGCGGGTAAACAAGCTCCTACGTTTGTTTCGGGCCAGTTATTACTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAAAA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTgg > 1:249682‑M2/6‑149 (MQ=255) cgggCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGc < 4:106075‑M2/145‑1 (MQ=255) cgcgCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGc < 3:191662‑M2/145‑1 (MQ=255) cgcTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGaaac < 2:122283/149‑1 (MQ=255) ttCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GAGTGGCCAGaaacaaa > 8:248139/1‑149 (MQ=255) cgcgGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGGCGCTCGCGCCTGGCACAGGAGG‑GATTGGCCAGaaacaaac < 7:226569/148‑1 (MQ=255) gcgGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACg < 3:349281/148‑1 (MQ=255) gcgGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACg < 4:288002/148‑1 (MQ=255) cgGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTa < 2:271777/149‑1 (MQ=255) gggTACTCCCGCTCCTACGTGTGTTGCGGGCCAGTTATTCCTTTGTGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGGCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAg < 7:146494/149‑1 (MQ=255) gggTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAg < 8:166407/149‑1 (MQ=255) aCCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCgg < 3:185311/149‑1 (MQ=255) aCCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCgg < 7:281137/149‑1 (MQ=255) cccGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCggg < 5:19425/149‑1 (MQ=255) ccGCTCCTAAGTTTGTTTCTGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACTCCTCGATATCGCGTC‑‑‑‑‑GTACAAACC‑AGGCGGTCGCGCGCGCCTTGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCGGGt < 2:249682/149‑1 (MQ=255) tCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGACTGGTGCAGGAGG‑GACTGGCC‑TAAACAAACGTAGGAGCGGGTTTAcc > 4:59253/1‑149 (MQ=11) cTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGAGGGGGAAAAAGACAGGCGGACGCGCGCGCCTGGCACAGGAGG‑GATAGGCAAGAAACAAACGTAGGAGCGGGt > 1:122395/1‑149 (MQ=25) cTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCGGGTTTAccc < 7:145261‑M2/149‑4 (MQ=255) cTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGGCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCGGGTTTAc > 2:154003‑M2/1‑146 (MQ=255) gtttgtttCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGACTGGTGCAGGAGG‑GACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCcgcg > 7:167978/1‑147 (MQ=11) gtttgtttCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGACTGGTGCAGGAGG‑GACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCcgcg > 1:219909/1‑147 (MQ=11) tttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgc < 2:139377‑M2/149‑13 (MQ=255) tttCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGACTGGTGCAGGAGG‑GACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGcgcc > 7:149804/1‑149 (MQ=14) ggCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGACTGGTGCAGGAGG‑GACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCcgcgcg > 7:342565/1‑149 (MQ=14) ccAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgg > 1:139377‑M2/1‑130 (MQ=255) attATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGACTGGTGCAGGAGG‑GACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCgcgggcgg > 8:324378/2‑149 (MQ=14) ccTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctc < 4:191491‑M2/149‑29 (MQ=255) cgcgCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATg > 8:69166/1‑149 (MQ=255) cgcgCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATg > 1:190334/1‑149 (MQ=255) gcgcACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATgg > 2:306078/1‑149 (MQ=255) gcgcACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATgg < 1:306078/149‑1 (MQ=255) gcACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACaggag < 2:59869/75‑1 (MQ=255) gcACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACaggag > 1:59869/1‑75 (MQ=255) gaccgccttggggCATGTCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGACTGGTGCAGGAGG‑GACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaa < 2:69558‑M2/143‑47 (MQ=255) cttggGGCATGTCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGACTGGTGCAGGAGG‑GACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctc > 1:69558‑M2/3‑96 (MQ=255) ccTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGaa < 8:206819/76‑1 (MQ=255) ccTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGaa > 7:206819/1‑76 (MQ=255) cTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgc > 7:345942‑M2/1‑85 (MQ=255) cTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgc < 8:345942‑M2/102‑18 (MQ=255) tCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGACTGGTGCAGGAGG‑GACTGTCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccccgcggccggcgctcgatctcacagcctctgaaaatcctccgccaaacacct < 2:70153‑M2/148‑66 (MQ=255) gATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGACTGGTGCAGGAGG‑GACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctca < 4:295766‑M2/148‑68 (MQ=255) tatCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGaa < 7:69166/149‑1 (MQ=255) tatCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGaa < 2:122395/149‑1 (MQ=255) tatCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGa < 2:190334/148‑1 (MQ=255) tCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGGAGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAg > 1:77418/1‑149 (MQ=255) tCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGc > 4:173951/1‑149 (MQ=255) cgcgTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGc > 5:130429/1‑148 (MQ=255) gcgTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCa < 8:145261/149‑1 (MQ=255) cgtc‑‑‑‑‑gtACAAACA‑AGGCGGTCGCGCGCGACTGGTGCAGGAGG‑GACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattcc < 4:109620‑M2/148‑75 (MQ=255) tc‑‑‑‑‑gtACAAACA‑AGGCGGTCGCGCGCGACTGGTGCAGGAGG‑GACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaac > 3:109620‑M2/1‑72 (MQ=255) tACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTg > 7:32968/1‑148 (MQ=255) acaaaca‑aGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGc > 2:169019/1‑148 (MQ=255) aaaca‑aGGCGGTCGCGCGCGACTGGTGCAGGAGG‑GACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtc < 4:95627‑M2/149‑84 (MQ=255) aaaca‑aGGCGGTCGCGCGCGACTGGTGCAGGAGG‑GACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggccctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtc < 8:320753‑M2/149‑84 (MQ=255) aca‑aGGCGGTCGGGCGCGACTGGTGCAGGAGG‑GACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtcca > 1:70153‑M2/1‑64 (MQ=255) aca‑aGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAAttt > 6:239731/1‑149 (MQ=255) aca‑aGGCGGTCGCGCGCGACTGGTGCAGGAGG‑GACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtcca < 7:258596‑M2/149‑86 (MQ=255) a‑aGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTcc < 3:173951/149‑1 (MQ=255) a‑aGGCGGTCGCGCGCGACTGGTGCAGGAGG‑GACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtccac < 3:299636‑M2/148‑87 (MQ=255) aGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCt < 2:77418/149‑1 (MQ=255) gcgcgcCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCAcc > 2:202823/1‑149 (MQ=255) gcgcgaCTGGTGCAGGAGG‑GACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtccactcaaaattccaa < 8:322819‑M2/149‑99 (MQ=255) cgcgaCTGGTGCAGGAGG‑GACTGGCC‑GAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctcgatctcacaggcgctgaaaatcctccggcaaacacctcaaaattccaacgccgtccactcaaaattccaac > 7:324378‑M2/1‑50 (MQ=255) tGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTcgccgc > 8:95819/1‑149 (MQ=255) tGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTcgccgc > 4:151284/1‑149 (MQ=255) | GATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTC‑‑‑‑‑GTACAAACA‑AGGCGGTCGCGCGCGCCTGGCACAGGAGG‑GATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGC > NC_002947/5988747‑5989039 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |