| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,039,240 | G→T | 9.2% | intergenic (‑260/+34) | PP_5290 ← / ← pyrE | transposase/orotate phosphoribosyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,039,240 | 0 | G | T | 9.2% | 226.5 / 12.1 | 76 | intergenic (‑260/+34) | PP_5290/pyrE | transposase/orotate phosphoribosyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (35/33); new base T (5/2); total (41/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.38e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.65e-01 | |||||||||||
AGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTGGGTCAGCGAAACAATGCTGACCAC > NC_002947/6039098‑6039384 | aggGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTgaagaa < 2:311969/148‑1 (MQ=255) gggTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGt > 4:198439/1‑149 (MQ=255) gggTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGt > 5:353024/1‑149 (MQ=255) ggTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTc < 3:87559/149‑1 (MQ=255) gTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATATAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCg > 5:95303/1‑149 (MQ=255) tcCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGTCACTCCTCCTCCCTTCAAGTCCTACCATACAAGAGGGTTTACCAGCGAAAGGGCAAGATCAGTCGGCAACAAAAAATGCGACACTAGGAAGAAGTTCGCCttgta > 5:201264/1‑145 (MQ=17) ccTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCa > 7:201775/1‑149 (MQ=255) cTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCTTCTTCAGAGGGTCGCCtttttttg < 1:115931/149‑4 (MQ=18) cTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCttttt < 6:166440/146‑1 (MQ=255) cTACGGTCTGTACTGCGCGAACAGTCAGAACCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCAt > 2:163993/1‑149 (MQ=255) cGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTcc > 2:63513/1‑149 (MQ=255) cGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTc < 2:123383/148‑1 (MQ=255) ggTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCttttt < 5:12673/142‑1 (MQ=255) ggTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCttttt > 6:12673/1‑142 (MQ=255) tCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTgg < 3:198439/149‑1 (MQ=255) cTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTggg > 8:227191/1‑149 (MQ=255) tACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCa < 7:227191/149‑1 (MQ=255) cTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATATAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAg < 6:95303/148‑1 (MQ=255) cTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAg < 3:66571/148‑1 (MQ=255) tGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGa > 4:124083/1‑149 (MQ=255) cgcgAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGAt < 6:140063/148‑1 (MQ=255) cgcgAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGAt < 6:354121/148‑1 (MQ=255) gAACAGTCAGAAGCGAGTTATGGCCGTCCTCCTCCCTTCAAGTCCTACCATTCAAGCGGGGTTAGCCGGGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACGCTCTGAAGAAGGTCGCCTTTTTCATTCCTgg < 3:345491/137‑1 (MQ=25) gAAAAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGCGTTTACCCGCGAAAGCGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTCAAGAAGATCGCCTTTTTCATTCCTgg > 4:345491/1‑137 (MQ=25) aCAGTCAGAAGCGAGTTATGGCCCTCCTCCTCACTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATc < 8:145439/149‑1 (MQ=255) aGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATccc > 6:124484/1‑149 (MQ=255) aGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCAAAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATccc > 3:244145/1‑149 (MQ=255) cAGAAGCGAGTTACGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAACAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTa < 8:98164/149‑1 (MQ=255) gAACCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACt < 1:163993/149‑1 (MQ=255) ttATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGACGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGCTCCCGTACTGCGccccg > 6:317748/1‑147 (MQ=255) ttATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCgg > 7:187056/1‑149 (MQ=255) cccTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGcc > 3:296093/1‑149 (MQ=255) cctcctcctCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCt < 3:355458/149‑1 (MQ=255) ctcctccCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGa < 3:124083/148‑1 (MQ=255) ctcctccCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGa < 7:87056/148‑1 (MQ=255) ctccCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACa < 5:127175/147‑1 (MQ=255) ctccCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGc > 2:70979/1‑149 (MQ=255) cccTTCAAGTCCTACCATACAAGCGGGCTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCg > 2:266667/1‑149 (MQ=255) ccTTCAAGTCCTACCATACAAGCGGGTTTACCCGGGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCgg > 2:322706/1‑149 (MQ=255) ccTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGcc < 8:101338/147‑1 (MQ=255) ccTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCgg > 7:125104/1‑149 (MQ=255) cAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAATAAGGTCGCCTTTTTCATTCGTGGGCCAGGATGAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCa < 2:77136/147‑1 (MQ=255) tACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTa > 6:374309/1‑123 (MQ=255) tACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTa < 5:374309/123‑1 (MQ=255) ccATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGttt > 5:145834/1‑148 (MQ=255) aTACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAg > 6:376298/1‑149 (MQ=255) tACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGc > 1:9121/1‑149 (MQ=255) tACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGc < 8:201775/149‑1 (MQ=255) aCAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCt > 6:182321/1‑149 (MQ=255) gggTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGAt < 5:182321/149‑1 (MQ=255) gggTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGAt > 2:279985/1‑149 (MQ=255) ggTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATc < 4:236058/149‑1 (MQ=255) ccGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTGATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCGAGACAGCCGGCAGATGCTGTTTCAGCTGGTGATCGTCAGc > 6:174567/1‑148 (MQ=255) ccGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGc > 8:245793/1‑148 (MQ=255) cgcgAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGc > 5:80470/1‑147 (MQ=255) cgAAAGGGCCAGATCAGGCGGCAAAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAgg < 4:244145/149‑1 (MQ=255) gggCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTc < 6:353024/149‑1 (MQ=255) gggCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTc < 2:9121/149‑1 (MQ=255) ccAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAg > 7:11651/1‑149 (MQ=255) ccAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAg > 1:289514/1‑149 (MQ=255) aGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTgg < 1:63513/149‑1 (MQ=255) gaatgaaaaaGGCGACCTTCTTCAGAGGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCAGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTGGGTCAGc > 8:18229/6‑149 (MQ=38) atgaaaaaGGCGACCTTCTTCAGAGGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTGGGTCAGCg > 4:239668/4‑148 (MQ=39) aaaaaaaGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGAAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCt > 8:245491/1‑138 (MQ=255) aaaaaaaGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGAGCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCt < 7:245491/138‑1 (MQ=255) aaaaaaGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTGGGTCAGCGaaa < 1:128404/149‑1 (MQ=255) aaaaGGCGACCTTCTTCAGAGGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTGGGTCAGCGAAAc > 3:49212/1‑148 (MQ=255) aaaaGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTGGGTCAGCGAAAc > 2:223557/1‑148 (MQ=255) aaaGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTGGGTCAGCGAAACaa > 6:171685/1‑149 (MQ=255) aaGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTGGGTCAGCGAAACAAt < 7:189911/149‑1 (MQ=255) aGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTGGGTCAGCGAAACAATg < 7:245793/149‑1 (MQ=255) ggCGACCTTCTTCAGAGGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGttt < 2:240126/96‑1 (MQ=38) ggCGACCTTCTTCAGAGGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGttt > 1:240126/1‑96 (MQ=38) ggCGACCTTCTTCAGAGGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTACGCCACGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCCGCCAGGAACTCCAGCACCTGGGTCAGCCAAACAATGc > 4:103596/1‑149 (MQ=255) ggCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCCGCACCTGGGTCAGCGATACAATGc > 4:301304/1‑149 (MQ=255) aCCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTGGGTCAGCGAAACAATGCTGac < 5:376298/149‑1 (MQ=255) ctctGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTGGGTCAGCGAAACAATGCTGaccac > 7:309828/1‑149 (MQ=255) | AGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCCTACCATACAAGCGGGTTTACCCGCGAAAGGGCCAGATCAGGCGGCACAAAAAAAGGCGACCCTCTGAAGAAGGTCGCCTTTTTCATTCCTGGGCCAGGATCAGATCCCGTACTGCGCCCGGTAGGCCTCGACAGCCGGCAGATGCTGTTTCAGCTGTGGATCGTCAGCCAGGAACTCCAGCACCTGGGTCAGCGAAACAATGCTGACCAC > NC_002947/6039098‑6039384 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |