| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,043,666 | T→A | 6.6% | intergenic (+18/+16) | gmk → / ← PP_5297 | deoxyguanylate kinase/guanylate kinase/amino acid transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,043,666 | 0 | T | A | 6.6% | 314.9 / 7.4 | 105 | intergenic (+18/+16) | gmk/PP_5297 | deoxyguanylate kinase/guanylate kinase/amino acid transporter |
| Reads supporting (aligned to +/- strand): ref base T (46/52); new base A (3/4); total (49/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.96e-01 | |||||||||||
Only 100 of 109 total aligned reads displayed.
CTACGTCATCATCAATGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATCGCGGCAATCACGAACACCAG > NC_002947/6043519‑6043813 | cTACGTCATCATCAATGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGTAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCAtt < 2:200151/149‑1 (MQ=255)cTACGTCATCATCAATGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCAtt > 4:172933/1‑149 (MQ=255)cTACGTCATCATCAATGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCAtt < 1:314622/149‑1 (MQ=255)cTACGTCATCATCAATGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCAtt < 5:243682/149‑1 (MQ=255) tACGTCATCATCAATGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTTCTGCTGAAGAACCAGCAGCAGCGTCATGCGGCATTGGTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCAGCATTg > 3:371502/1‑149 (MQ=255) tcatcatcaATGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCAATGCAGc > 1:308530/1‑149 (MQ=255) tcatcaATGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCCGCCGCAGCGGGATGCGGCATTTCTCAAGCAAATGTTGGG‑CTGAAGATCGATTGGGCTGCATTGGAGccc > 5:61476/1‑148 (MQ=255) atcaATGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCa > 6:15408/1‑148 (MQ=255) tcaATGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAAt > 8:128440/1‑149 (MQ=255) tcaATGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCAATGCAGCCCCatc < 2:308530/149‑3 (MQ=255) aaTGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATgg > 7:149135/1‑149 (MQ=255) aaTGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATgg > 1:13670/1‑149 (MQ=255) aaTGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATg < 1:46295/148‑1 (MQ=255) aaTGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATg < 4:21478/148‑1 (MQ=255) aaTGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATg < 4:206747/148‑1 (MQ=255) atgatgATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGt < 2:127917/149‑1 (MQ=255) atgatgATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCAATGCAGCCCCatcgat < 3:19557/149‑6 (MQ=255) tgatgaTTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGtt > 8:246358/1‑149 (MQ=255) tgaggaTTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGtt < 5:262851/149‑1 (MQ=255) gatgatTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGttt > 8:67098/1‑149 (MQ=255) atgatTTCGACACGGCGCTGGCAGACTTGACAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTa < 5:228492/149‑1 (MQ=255) atgatTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGAGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTa < 5:261960/149‑1 (MQ=255) tgatTTCGACACGGCGCTTTCAGACTTTAAAGCAGTGTTCCGCTCGACTCGTGTGCTGCTGAATAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGAAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTa < 1:309193/148‑1 (MQ=255) tgatTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTa < 1:116735/148‑1 (MQ=255) atTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTc < 7:259881/149‑1 (MQ=255) tttCGTCACGGGGCTGTGAGACTTGATAGCTGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGGAGCAGCGTCATGCGGCATTGCTGAAGCAAATGATCGG‑CTGAAGATCGATGGGGGTGCATTGCAGCCCCAATGGTTTAGtg < 4:371502/148‑2 (MQ=255) tCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTACAGCCCCAATGGTTTAGTCCt < 7:304864/148‑1 (MQ=255) cGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTg > 1:192507/1‑148 (MQ=255) cGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTg < 6:189879/148‑1 (MQ=255) acacGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGtt > 6:196626/1‑138 (MQ=255) acacGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGtt < 5:196626/138‑1 (MQ=255) acacGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAg < 5:322192/149‑1 (MQ=255) acacGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAg > 5:211632/1‑149 (MQ=255) cacGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGc > 8:269561/1‑149 (MQ=255) acGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCg < 4:311691/149‑1 (MQ=255) acGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCg > 3:368209/1‑149 (MQ=255) ggCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCgg > 6:220305/1‑148 (MQ=255) ggCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCgg > 5:348164/1‑148 (MQ=255) cgcTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGATTAGTCCTGCAGCGGc > 2:5255/1‑147 (MQ=255) ggCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAgg > 3:8346/1‑147 (MQ=255) gCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAg > 7:6552/1‑149 (MQ=255) ttGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTCGTCCTGCAGCGGCAAGGTAGCctgct < 1:5255/149‑1 (MQ=255) ttGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAg > 8:348326/1‑139 (MQ=255) ttGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAg < 7:348326/139‑1 (MQ=255) ttGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCctgct > 5:80009/1‑149 (MQ=255) gAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGa > 2:332593/1‑149 (MQ=255) gCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCTATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCa < 2:192507/149‑1 (MQ=255) gCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCa < 7:128440/149‑1 (MQ=255) cAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAg > 8:134271/1‑149 (MQ=255) aGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAgg < 6:211632/149‑1 (MQ=255) cGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGcc < 2:248548/148‑1 (MQ=255) gCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTATccc > 4:282792/1‑148 (MQ=255) gCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGcccc > 6:65620/1‑149 (MQ=255) cTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGCTTTAGTCCTGCAGCAGCAAGGTAGCCTGCTGACGCAGGGTAGcccc > 6:269261/1‑148 (MQ=255) aaTCGGCTGCTGCTGAAGAAGCAGCATCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTa < 7:297487/139‑1 (MQ=255) aTCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGaa < 6:80009/149‑1 (MQ=255) gctgctgctGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTAc < 5:69904/149‑1 (MQ=255) ctgctgctgAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACg < 8:6552/149‑1 (MQ=255) tgctgctgAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGc > 7:247339/1‑149 (MQ=255) tgctgctgAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGc > 1:8316/1‑149 (MQ=255) ctgctgAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGcc < 3:172933/148‑1 (MQ=255) ctgctgAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCg > 4:196388/1‑149 (MQ=255) tgAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGgcg > 5:52345/1‑148 (MQ=255) aagaagCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGcgcac > 7:5447/1‑149 (MQ=255) gaagCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGGACTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGcgcacg > 1:77511/1‑149 (MQ=255) gcagcagcagcGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCAGGCGCACGCAt > 1:135333/1‑148 (MQ=255) cagcagcGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGgc > 4:98038/1‑136 (MQ=255) agcagcGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGa > 6:91032/1‑149 (MQ=255) cagcGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGTAAGTACGCCGGCGCACGCATGCGCGACa < 1:214196/149‑1 (MQ=255) cagcGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACa < 2:13670/149‑1 (MQ=255) agcGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAg > 1:205174/1‑149 (MQ=255) tCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGcatc < 2:77511/149‑1 (MQ=255) aTGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGCTTTAGTCCTGCAGCAGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGcatca < 5:269261/148‑1 (MQ=255) cGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCAtcatca < 4:294204/148‑1 (MQ=255) gCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGc < 5:15408/149‑1 (MQ=255) cATTGCTCAAGGAAATGATCGG‑CTGAAGATCGATTGGGCTGCATTGCAGCCCCAATGGTTTATTCCTGCAGCGGCAATGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGc < 3:282792/148‑1 (MQ=255) gCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGAt < 7:183809/148‑1 (MQ=255) cTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATg < 7:133288/148‑1 (MQ=255) cTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATg < 7:246358/148‑1 (MQ=255) aaGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGcc < 3:196388/147‑1 (MQ=255) aaGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCaa < 8:247339/149‑1 (MQ=255) aaGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCaa < 8:149135/149‑1 (MQ=255) aaGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCaa < 6:61476/149‑1 (MQ=255) aGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCATTGGTTTAGTCCTGCAGTGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAg > 1:268209/1‑149 (MQ=255) aaTGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCAcc > 8:327797/1‑149 (MQ=255) aTCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCAcc > 8:184028/1‑145 (MQ=255) tCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCGGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCgaga < 6:275843/148‑1 (MQ=255) tCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAgat < 6:348164/149‑1 (MQ=255) tCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAgat < 7:184028/149‑1 (MQ=255) cTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATc > 1:112589/1‑149 (MQ=255) aaGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATcgcg < 5:220305/149‑1 (MQ=255) cattGGGGCTGCAATGCAGCCCCATTGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCaa > 8:22733/4‑127 (MQ=255) tGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATCGCGGCAATCAc < 7:134271/149‑1 (MQ=255) ggggCTGCAATGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATCGCGGCAATCAc > 1:200406/1‑148 (MQ=255) ggCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATCGCGGCAATCACGaa < 7:327797/149‑1 (MQ=255) ggCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATCGCGGCAATCACGaa < 2:205174/149‑1 (MQ=255) gCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATCGCGGCAATCACGAac > 4:27254/1‑149 (MQ=255) tGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCCAGATGATCGCGGCAATCACGAacac > 2:292259/1‑149 (MQ=255) aTTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACa > 7:87022/1‑94 (MQ=255) aTTGCAGCCCCAATGGGTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATCGCGGCAATCACGAAGAccag > 6:69172/1‑149 (MQ=255) | CTACGTCATCATCAATGATGATTTCGACACGGCGCTGGCAGACTTGAAAGCAGTGTTCCGCTCGAATCGGCTGCTGCTGAAGAAGCAGCAGCAGCGTCATGCGGCATTGCTCAAGCAAATGATCGG‑CTGAAGATCGATGGGGCTGCATTGCAGCCCCAATGGTTTAGTCCTGCAGCGGCAAGGTAGCCTGCTGACGCAGGGTAGCCCCGAGGAAGTACGCCGGCGCACGCATGCGCGACAGCATCATCAGGCCGATGCCAAGCACCGAGATGATCGCGGCAATCACGAACACCAG > NC_002947/6043519‑6043813 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |