| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,122,074 | G→T | 5.9% | P26T (CCC→ACC) | PP_5371 ← | rubredoxin/rubredoxin reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,122,074 | 0 | G | T | 5.9% | 255.9 / 4.4 | 84 | P26T (CCC→ACC) | PP_5371 | rubredoxin/rubredoxin reductase |
| Reads supporting (aligned to +/- strand): ref base G (32/47); new base T (2/3); total (34/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.51e-01 | |||||||||||
GCGGCAACCAGTGGTTGCGCCTGGATAACCGGCGCGGTAGCCACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTCGCCCTTGATACGCACGGCCAGGTTCTTGGTCCTGACGTAGCTGTAGAGCGCCTC > NC_002947/6121926‑6122221 | gCGGCAACCAGTGGTTGCGCCTGGATAACCGGCGCGGTAGCCACTGCTGCGATCGGTGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCggg < 3:264769/149‑1 (MQ=255) cGGCAACCAGTGGTTGCGCCTGGATAACCGGCGCGGTAGCCACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCgggg < 4:360392/149‑1 (MQ=255) gCAACCAGTGGTTGCGCCTGGATAACCGGCGCGGTAGCCACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCggggg > 1:194477/1‑148 (MQ=255) gCAACCAGTGGTTGCGCCTGGATAACCGGCGCGGTAGCCACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCggggg > 2:93808/1‑148 (MQ=255) gCAACCAGTGGTTGCGCCTGGATAACCGGCGCGGTAGCCACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGc < 1:155765/149‑1 (MQ=255) aCCAGTGGTTGCGCCTGGATAACCGGCGCGGTAGCCACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACTGGGGGCAAt < 5:345375/149‑1 (MQ=255) cAGTGGTTGCGCCTGGATAACCGGCGCGGTAGCCACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGc > 8:73069/1‑149 (MQ=255) gTTGCGCCTGGATAACCGGCGCGGTAGCCACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCcgtc > 8:35352/1‑148 (MQ=255) gTTGCGCCTGGATAACCGGCGCGGTAGCCACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCcgtc < 7:73069/148‑1 (MQ=255) gTTGCGCCTGGATAACCGGCGCGGTAGCCACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCcgtc < 7:35352/148‑1 (MQ=255) cgcCTGGATAACCGGCGCGGTAGCCACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCgg < 5:173975/149‑1 (MQ=255) ccTGGTTAACCGGCGGGGTAGGCACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGTCCTTGCTCTCTGGGCATAGGCAGTCTTCGGTCACGTGCTCCCA‑GCGGGTACCGGGGGCAATGCCGTGGTCGGGc < 8:284474/149‑1 (MQ=255) ccTGGATAACCGGCGCGGTAGCCACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGTGGCAATGCCGTCGTCGGGc > 7:336769/1‑149 (MQ=255) ccTGGATAACCGGCGCGGTAGCCACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGTGGCAATGCCGTCGTCGGGc > 7:331831/1‑149 (MQ=255) ggATAACCGGCGCGGTAGCCACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCaa > 4:349069/1‑149 (MQ=255) aacGGCGCGGTAGCCACTGCTGCGATCGGGGTGCCTAGTTCGCTCATTTCAAAGGCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCttt < 6:223123/147‑1 (MQ=255) aCCGGCGCGGTAGCCACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCttt < 4:321752/149‑1 (MQ=255) ccGGCGCGGTAGCCACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCTGGGGCAATGCCGTCGTCGGGCCAACCTTTg < 5:22061/149‑1 (MQ=255) ccGGCGCGGTAGCCACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTg < 4:338595/149‑1 (MQ=255) cGGCGCGGTAGCCAATGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGAGCTTGCACTCAGGGCATAGCTAGTCTTCTTGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTgg < 7:244611/149‑1 (MQ=255) cgcgGTAGCCACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCtt < 3:339224/149‑1 (MQ=255) gcgGTAGCCACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTtc < 8:208187/149‑1 (MQ=255) gCCACTTCTGCGATCTGGTTGCTGAGTTCTATCATTTCAAAGTCGGCTTAGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCTGTGGCAATGCCGTCGTCGGGCCAACCTTTGGCTtcg < 6:307512/144‑1 (MQ=255) gCCAATGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCAGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGTGCAATGCCGTAGTCTGTCCAACCTTTGGCTtcg > 5:307512/1‑144 (MQ=255) ccACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCTGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCTTCGTCGGGCCAACCTTTGGCTTCGTCGTAg < 8:169737/149‑1 (MQ=255) ccACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAg < 5:327981/149‑1 (MQ=255) ccACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAg < 1:303487/149‑1 (MQ=255) cACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCACCCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAg < 1:93808/149‑1 (MQ=255) aCTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGTACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTtcgtcg > 7:245398/1‑144 (MQ=255) ctgcGATCGTGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGGCTTCGGGCACGTCCTCCCA‑GCGTGTACCGTGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGa < 5:236337/149‑1 (MQ=255) gATCGGGGGGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACcac < 2:259621/149‑1 (MQ=255) gggTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACTTCCTCCCA‑GCGGGTACAGGGGTCAATGACGTCGTCTGGACAACATTTGGCTTAGTAGTAGATCAGACCAAAgat > 8:99044/1‑148 (MQ=255) tGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGatgatg > 5:151619/1‑149 (MQ=255) tGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGTGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCag < 8:336769/149‑1 (MQ=255) tGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGTGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCag < 8:331831/149‑1 (MQ=255) tGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCt < 5:316963/119‑1 (MQ=255) tGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCt > 6:316963/1‑119 (MQ=255) ttCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAgatgat > 4:242780/1‑141 (MQ=255) ttCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAgatgat < 3:242780/141‑1 (MQ=255) ttCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGcc < 2:106481/149‑1 (MQ=255) ttCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCCTCATCGGGCCAACCTTTGGCATCGTCGTAGATCAGACCACAgatcaagc > 8:280650/1‑138 (MQ=255) ttCGATCATTTCAAAGTCGGCTTAGCCGACCTTGCAGTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGc < 7:280650/143‑1 (MQ=255) gATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAgg > 1:141992/1‑149 (MQ=255) gATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAgg > 8:283362/1‑149 (MQ=255) gATCATTTCAAAGTCGGCTTTGCCGAACTTGCACTAAGGGCATAGAAAGTCTTCGGGAAAGTCATCCCA‑GAGGGTCCCGGGGGCAATGACGTCGTAGGGCCAACATTTGTCTTCTTAGTAGATAAGACCACAGATGATGAAGAGCCAgt > 2:284898/1‑148 (MQ=255) aTTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGtttt < 4:321143/149‑1 (MQ=255) tttCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTc < 5:169512/149‑1 (MQ=255) tCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCa < 7:203979/148‑1 (MQ=255) gcAAGGTCGGCAAAGCCGACTTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCATCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCAt > 3:153283/2‑149 (MQ=255) aaaGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAga < 6:337458/125‑1 (MQ=255) aaaGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAga > 5:337458/1‑125 (MQ=255) ggCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTAtgctgc < 7:75327/149‑1 (MQ=255) gCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTAtgctgc > 4:307848/1‑148 (MQ=255) cTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGcct < 2:194477/149‑1 (MQ=255) ccGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCa > 8:288872/1‑149 (MQ=255) aCCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGTTACCGCGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTc < 5:175607/149‑1 (MQ=255) ttGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTCGcc > 7:169043/1‑149 (MQ=255) gCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGTGCAATGCCGTCGTCGGGCCAACCGTTGGCTTCGTCGGAGATCAGACCACAGATGATGCAGAGCCAGTTTTTCATTATGATGCCTCCTCACTAGCCCt > 1:308276/1‑149 (MQ=255) gCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTCGcc < 3:307848/147‑1 (MQ=255) aCTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTCGCCCtt > 5:215247/1‑148 (MQ=255) aCTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTCGCCCtt > 7:196889/1‑148 (MQ=255) cTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGTGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTa > 8:26427/1‑125 (MQ=255) cTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTa < 7:26427/125‑1 (MQ=255) tCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTCGCCCTTGa > 3:13910/1‑148 (MQ=255) gCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTCGCCCTTGATACGCa > 5:7833/1‑149 (MQ=255) cAGTCTTAGTGCACTTACTCCCA‑GCGGGTACGGGGGGCAATGCCGTCGTCGGTCCAACCTTTGGCTTCGTCGTAGATCAGACAACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTCGCCCTTGATACGCACGTCCAg < 7:99044/149‑1 (MQ=255) gTCTTCGGGCACGTCCTCCCA‑GCGGGTACC‑GGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTCGCCCTTGATACGCACGGCCAGGtt > 4:329424/1‑149 (MQ=255) tCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTCGcc > 3:127859/1‑128 (MQ=255) tCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTCGcc < 4:127859/128‑1 (MQ=255) caggCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTCGCCCTTGATACGCACGGCCAGGTTc < 3:244459/144‑1 (MQ=255) cGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTCGCCCTTGATACGCACGGCCAGGTTCtt < 7:283362/148‑1 (MQ=255) gggCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATTAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGcctcc < 1:78279/114‑1 (MQ=255) gggCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTCGCCCTTGATACGCACGGCCAGGTTCTTgg < 6:215247/149‑1 (MQ=255) gggCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTCGCCCTTGATACGCACGGCCAGGTTCTTgg < 8:196889/149‑1 (MQ=255) aCGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTCGCCCTTGATACGCACGGCCAGGTTCTTGGTCCt < 3:296713/149‑1 (MQ=255) aCGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTCGCCCTTGATACGCACGGCCAGGTTCTTGGTCCt > 5:338544/1‑149 (MQ=255) tcctccCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTCGCCCTTGATACGCACGGCCAGGTTCTTGGTCCTGAc < 7:288872/149‑1 (MQ=255) ccA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTCGCCCTTGATACGCACGGCCAGGTTCTTGGTCCTGACGTAg < 6:7833/148‑1 (MQ=255) ccA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTCGCCCTTGATACGCACGGCCAGGATCTTGGTCCTGAAGTAGc > 5:94263/1‑149 (MQ=255) cA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTCGCCCTTGATACGCACGGCCAGGTTCTTGGTCCTGACGTAGCt > 3:234459/1‑149 (MQ=255) cA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTCGCCCTTGATACGCACGGCCAGGTTCTTGGTCCTGACGTAGCt > 3:111284/1‑149 (MQ=255) cGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTCGCCCTTGATACGCACGGCCAGGTTCTTGGTCCTGACGTAGCTGTa < 4:13910/149‑1 (MQ=255) cGGGTACCGGGGGCAATGCCGGCGGCGGGCCAACCTTTGGCGTCGGCCTAGATCAGACCACACCTGCAGCAGACCCAGGTTTTCATTATGCTGCCTCCTCACTCGCCCTTGATACGCACGGCCAGGTTCTTGGTCCTGACGTAGCTGTa < 8:245398/149‑1 (MQ=255) ggTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTCGCCCTTGATACGCACGGCCAGGTTCTTGGTCCTGACGTAGCTGTaga < 3:349069/149‑1 (MQ=255) gTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTCGCCCTTGATACGCACGGCCAGGTTCTTGGTCCTGACGTAGCTGTagag > 7:140664/1‑149 (MQ=255) gTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTCGCCCTTGATACGCACGGCCAGGTTCTTGGTCCTGACGTAGCTGTagag < 6:151619/149‑1 (MQ=255) tACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTCGCCCTTGATACGCACGGCCAGGTTCTTGGTCCTGACGTAGCTGTAGAgc > 7:318301/1‑149 (MQ=255) cGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTCGCCCTTGATACGCACGGCCAGGTTCTTGGTCCTGACGTAGCTGTAGAGCGcc < 8:140664/149‑1 (MQ=255) ggggCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATTCTGCCTCCTCACTCGCCCTTGATACGCACGGCCAGGTTCTTGGTCCTGACGTAGCTGTAGAGCGcctc < 6:338544/149‑1 (MQ=255) | GCGGCAACCAGTGGTTGCGCCTGGATAACCGGCGCGGTAGCCACTGCTGCGATCGGGGTGCTGAGTTCGATCATTTCAAAGTCGGCTTTGCCGACCTTGCACTCAGGGCATAGCCAGTCTTCGGGCACGTCCTCCCA‑GCGGGTACCGGGGGCAATGCCGTCGTCGGGCCAACCTTTGGCTTCGTCGTAGATCAGACCACAGATGATGCAGAGCCAGGTTTTCATTATGCTGCCTCCTCACTCGCCCTTGATACGCACGGCCAGGTTCTTGGTCCTGACGTAGCTGTAGAGCGCCTC > NC_002947/6121926‑6122221 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |