| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,126,949 | A→G | 5.1% | intergenic (+40/+27) | PP_5374 → / ← PP_5375 | choline/carnitine/betaine transporter family protein/LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,126,949 | 0 | A | G | 5.1% | 234.6 / 2.0 | 78 | intergenic (+40/+27) | PP_5374/PP_5375 | choline/carnitine/betaine transporter family protein/LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (32/42); new base G (2/2); total (34/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.21e-01 | |||||||||||
TGGGCGCCTTCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCAC > NC_002947/6126801‑6127095 | tGGGCGCCTTCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCa < 4:61657/149‑1 (MQ=255) cTTCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCg < 3:107660/149‑1 (MQ=255) cTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCt > 2:134604/1‑149 (MQ=255) tataCCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCtt > 7:344766/1‑149 (MQ=255) taCCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCTGATGGCTGTCGGTCTtgt < 8:3178/149‑1 (MQ=39) taCCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTtgt < 3:121159/149‑1 (MQ=255) cTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGtt > 6:18556/1‑149 (MQ=255) ggATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTg < 1:134604/149‑1 (MQ=255) gATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTgg > 5:140746/1‑149 (MQ=255) gATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTgg < 5:18556/149‑1 (MQ=255) aTTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTggg > 6:30995/1‑149 (MQ=255) tCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTc > 4:57534/1‑135 (MQ=255) tCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTc < 3:57534/135‑1 (MQ=255) tcccGCATTGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGTGGGGCTTGATATGTGGCTGTCAGCGAAGAAAGCGAGCTTTCCTTAAGCCACGCTGGAAGACACAAGACCGAATGCTGTTGGCTGTCGGTCTtgt < 6:357330/136‑1 (MQ=255) aCCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGCGCAGACAGCGAAGAAAGCCAGCTAACCTAAAGCCAAACTGGAAGACACAAGACAGACAGCTGATGGCTGTCGGACTtgt > 5:357330/1‑137 (MQ=255) ccGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGc > 6:294071/1‑148 (MQ=255) cGCAAGGCATCACGCCGGTGGCTGGGCCGTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTa > 1:211962/1‑149 (MQ=255) ggCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCt > 3:254466/1‑149 (MQ=255) ggCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCt < 1:359175/149‑1 (MQ=255) tCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCAc < 8:251887/149‑1 (MQ=255) ccGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAg < 2:211962/149‑1 (MQ=255) cGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAgg > 7:225940/1‑149 (MQ=255) tGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAg > 6:274345/1‑149 (MQ=255) gCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAggg < 5:236553/149‑1 (MQ=255) gCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAggg < 8:128491/149‑1 (MQ=255) tGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGcc < 3:74596/149‑1 (MQ=255) tGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGc > 7:155642/1‑148 (MQ=255) ccTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCaa > 6:363574/1‑149 (MQ=255) cTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAAc < 5:30995/149‑1 (MQ=255) ggCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAAcc < 1:165843/147‑1 (MQ=255) cGAGGGGGTTGATATGGGGCTGACATCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTGGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCgg < 5:43587/149‑1 (MQ=255) cGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTccc < 6:281002/147‑1 (MQ=255) cGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTccc < 5:363574/147‑1 (MQ=255) cTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATAAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGcc > 1:368548/1‑149 (MQ=255) tGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACCGCCCTCAGCAGTCGGGGGTTGGGTTTGGGGACGCGAATTGAGCACCGAAGGCCGGGGCAGCAACCAGTGCCGGGACACCCCCCCGcg > 6:55332/1‑148 (MQ=255) tGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTACCGGAACAGCCGCACGCt > 1:258923/1‑149 (MQ=255) ggggCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTggg > 8:132814/1‑90 (MQ=255) ggggCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTggg < 7:132814/90‑1 (MQ=255) ggggCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGcc > 7:355277/1‑141 (MQ=255) ggggCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGcc < 8:355277/141‑1 (MQ=255) gCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCa < 6:140746/149‑1 (MQ=255) aCAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAg < 3:346744/149‑1 (MQ=255) cAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAgg < 5:294071/149‑1 (MQ=255) cAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAgg < 8:102859/149‑1 (MQ=255) aGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGa > 7:233427/1‑149 (MQ=255) aGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGa > 3:90595/1‑149 (MQ=255) aGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGa > 6:145759/1‑149 (MQ=255) gaagaaAGCCAGCTAACGTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGCACAGCCGCACGCTTTCACGAGGACCa > 4:252562/1‑149 (MQ=255) gaagaaAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCa < 8:233427/149‑1 (MQ=255) gaagaaAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCa > 8:106593/1‑149 (MQ=255) gaagaaAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTCCTGCACCGAAGGCAggg < 6:241546/105‑1 (MQ=255) ccAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCTTCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGt < 1:277185/149‑1 (MQ=255) ccAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGt < 4:254466/149‑1 (MQ=255) cTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGgac < 6:32805/149‑1 (MQ=255) cTAACCTAAAGACACCCTGGAATAGACAAGACGGACAGCGATCATCTGTCGGTCTTGTGTTTTGGGCAGTCTATTTCTGCACCGAAGGCATGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACTCTCGGTGgac < 4:348487/149‑1 (MQ=255) tAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGgac > 3:240213/1‑148 (MQ=255) aCCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGgacga > 7:332606/1‑148 (MQ=255) aCCTAAAGCCACCCCGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGgacga < 1:205905/148‑1 (MQ=255) cTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTc > 1:267051/1‑149 (MQ=255) gCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCcagca < 8:155642/149‑1 (MQ=255) cccTGGAAGACACAAGAGCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAgcagg > 5:29926/1‑147 (MQ=255) ccTGGAAGACACAAGACCGACAGCCATCAGCTGTGGGTCTTGTGTTTTGGGGAGGCTATTTCTGCACCGAAGGCAGGGCCCTCAACCAGTCCCGGAACAGCCGCACGGTTTCACGAGGACCACGCTCGGGGGCCGACTCCAgcagg > 3:231276/1‑146 (MQ=255) ccTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAgcagg > 6:71519/1‑146 (MQ=255) ggAAGACACAAGACCGACAGCCATCAGCCGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAAc > 1:163150/1‑149 (MQ=255) gAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGaa < 2:267051/147‑1 (MQ=255) gAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAAc < 8:225940/148‑1 (MQ=255) aGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTg < 2:258923/149‑1 (MQ=255) aGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTg < 7:106593/149‑1 (MQ=255) aGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTg < 4:90595/149‑1 (MQ=255) acaAGACCGACAGCTGATGGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGt > 8:227831/1‑149 (MQ=39) caAGCCCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCAGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTc < 8:344766/149‑1 (MQ=255) aaGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCg < 3:279734/149‑1 (MQ=255) aCAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGa < 6:29926/149‑1 (MQ=255) aCAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGa < 5:71519/149‑1 (MQ=255) ccATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTAc > 6:278880/1‑149 (MQ=255) ccATCAGCCGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTAc < 2:163150/149‑1 (MQ=255) cATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTAcc < 5:274345/149‑1 (MQ=255) aTCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACca > 1:216328/1‑149 (MQ=255) tCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACcac < 4:240213/149‑1 (MQ=255) | TGGGCGCCTTCCTATACCTGGGATTCACCCGCAAGGCATCACGCCGGTGGCTGGGCCCTTGGCCTGCGAGGGGCTTGATATGGGGCTGACAGCGAAGAAAGCCAGCTAACCTAAAGCCACCCTGGAAGACACAAGACCGACAGCCATCAGCTGTCGGTCTTGTGTTTTGGGCAGGCTATTTCTGCACCGAAGGCAGGGCCATCAACCAGTCCCGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCAC > NC_002947/6126801‑6127095 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |