| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 625,062 | C→T | 5.4% | intergenic (‑156/+27) | PP_0537 ← / ← ppa | transcriptional regulator/inorganic pyrophosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 625,062 | 0 | C | T | 5.4% | 224.0 / 2.1 | 74 | intergenic (‑156/+27) | PP_0537/ppa | transcriptional regulator/inorganic pyrophosphatase |
| Reads supporting (aligned to +/- strand): ref base C (43/27); new base T (2/2); total (45/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.42e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.55e-01 | |||||||||||
GGCGGGTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAAAGAAGTG > NC_002947/624922‑625208 | ggcggGTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCggg < 3:192571/149‑1 (MQ=255) gggTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCTTTGGCGGGGtt < 6:293795/149‑1 (MQ=255) ccAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCTTTGGCGGGGtttttcat > 3:282189/1‑144 (MQ=255) cAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCTTTGGCGGGGtttttcatg < 4:282189/149‑7 (MQ=255) aaGGAAATGAACCGGGTGTTGACGGGATTTCTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTc > 2:122194/1‑149 (MQ=255) aGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTc > 6:326290/1‑148 (MQ=255) aGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGGTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTc < 6:347794/148‑1 (MQ=255) gggTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCa < 4:188131/143‑1 (MQ=255) gggTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCa > 3:188131/1‑143 (MQ=255) gACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCa > 8:337550/1‑136 (MQ=255) gACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCa < 7:337550/136‑1 (MQ=255) gACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAgg > 2:214422/1‑147 (MQ=255) aCGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAg < 2:349405/149‑1 (MQ=255) gATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGGTCCATTCAGGCATGAAAAACCCCGCCATAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGAc < 3:224200/149‑1 (MQ=255) cGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGAAGGATTTGATCCCAGCAGAGAGCGCGTTCCATTCAGCCATGAAAAACACCGACAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCATGTAGGCAGCGACCGATTTgg > 4:305806/1‑149 (MQ=255) gAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCgg > 4:330520/1‑100 (MQ=255) gAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCgg < 3:330520/100‑1 (MQ=255) gAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGt > 6:268091/1‑130 (MQ=255) gAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGt < 5:268091/130‑1 (MQ=255) gAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGt > 2:313243/1‑149 (MQ=255) gAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGt > 5:309758/1‑149 (MQ=255) gAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCAGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGt < 2:271247/149‑1 (MQ=255) cTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGc < 5:326290/149‑1 (MQ=255) gTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCAc > 6:7287/1‑149 (MQ=255) tttGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACg > 4:13667/1‑149 (MQ=255) tttGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACg > 2:42373/1‑149 (MQ=255) ggATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGGGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGggcgg‑c > 1:262593/1‑149 (MQ=255) gtAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCt > 5:380197/1‑149 (MQ=255) tAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCtt < 1:7517/149‑1 (MQ=255) tgtAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGCCCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCt > 6:275260/1‑149 (MQ=255) tgtAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑c < 1:333776/147‑1 (MQ=255) tgtAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCt > 3:44077/1‑149 (MQ=255) tgtAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCt > 5:302779/1‑149 (MQ=255) tgtAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCt > 3:281231/1‑149 (MQ=255) tAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCTCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTc > 5:123672/1‑149 (MQ=255) tAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTc > 4:292383/1‑149 (MQ=255) tAGGATTTGTTACCAGCAGTGAGCGCGTTCCATTAAGGCATGAAAAACCCCCCCAAAGCGGGGTTTCCCTGCAGTCGAAATAAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTc > 8:74659/1‑149 (MQ=255) aGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTc > 7:316832/1‑148 (MQ=255) gATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGa > 8:77102/1‑148 (MQ=255) tttGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCt > 2:103764/1‑149 (MQ=255) gTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCTTGa > 5:282826/1‑149 (MQ=255) ttCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCTTGAc < 6:309758/149‑1 (MQ=255) ttCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCAATCTTGAc > 8:338093/1‑149 (MQ=255) tCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCTTGAcc > 6:12945/1‑149 (MQ=255) cagTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCTTGACCCACTTg > 8:16306/1‑149 (MQ=255) agTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGggcg < 3:184133/109‑1 (MQ=255) agTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGggcg > 4:184133/1‑109 (MQ=255) gTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCtt < 2:178230/137‑1 (MQ=255) tGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCTTGACCCACTTGccc < 7:16306/149‑1 (MQ=255) gAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCTTGACCCACTTGCCCt > 6:208058/1‑149 (MQ=255) gcgTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAGACCTTCGATCTTGACCCACTTGCCCTtct < 1:214422/149‑1 (MQ=255) gTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCTATCTTGACCCACTTGCCCTTCTCga < 7:338093/149‑1 (MQ=255) aTTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGCCCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCt > 5:156530/1‑149 (MQ=255) aTTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCt > 1:270322/1‑149 (MQ=255) aTTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCt > 7:58925/1‑149 (MQ=255) ttCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCtt > 4:72958/1‑149 (MQ=255) atgCATGAATAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTg < 4:30874/146‑1 (MQ=255) aGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGGACGTCGGCGCCTTCCCAG‑CCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTg < 1:103764/149‑1 (MQ=255) aGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCttt > 3:100205/1‑147 (MQ=255) aGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCttt < 4:100205/147‑1 (MQ=255) aGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTg < 6:380197/148‑1 (MQ=255) aGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGt < 5:208058/149‑1 (MQ=255) ggCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTg > 6:81705/1‑147 (MQ=255) gCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAg < 3:13667/149‑1 (MQ=255) cATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGACACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGt > 5:146869/1‑149 (MQ=255) tGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTg > 3:165026/1‑149 (MQ=255) tGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTg > 5:62641/1‑149 (MQ=255) ggaaaCCCCGCTTTGGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTgg > 2:158491/3‑148 (MQ=255) ggaaaCCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTc > 2:49433/3‑98 (MQ=255) ggaaaCCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTc < 1:49433/96‑1 (MQ=255) aaaaCCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCa < 1:42373/149‑1 (MQ=255) aCCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAaag < 4:165026/149‑1 (MQ=255) cccGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCCG‑CCTTCGAGCTTGCCCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAaagaa > 8:157933/1‑149 (MQ=255) cccGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAaag > 2:127606/1‑147 (MQ=255) ccAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCTTGACCCACt < 8:319476/111‑1 (MQ=255) ccAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCTTGACCCACt > 7:319476/1‑111 (MQ=255) cAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAAAGAAGTg < 6:123672/147‑1 (MQ=255) | GGCGGGTTGCCAGTAAGGAAATGAACCGGGTGTTGACGGGATTTGTACGAAAAGAGGCTGTTTGTAGGATGCTGGTGTAGGACTGTGTAGGATTTGTTCCCAGCAGTGAGCGCGTTCCATTCAGGCATGAAAAACCCCGCCAAAGCGGGGTTTCCCTGCAGTCGAAATCAGCCCTTGTAGGCAGCGACCGATTTGGTGATCGCGGCACGGGCGG‑CGTCGGCGCCTTCCCAG‑CCTTCGATCTTGACCCACTTGCCCTTCTCGAGATCTTTGTAGTTGGCAAAGAAGTG > NC_002947/624922‑625208 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |