| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 635,919 | A→T | 5.3% | E48V (GAA→GTA) | mpl → | UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 635,919 | 0 | A | T | 5.3% | 230.8 / 2.8 | 75 | E48V (GAA→GTA) | mpl | UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase |
| Reads supporting (aligned to +/- strand): ref base A (37/33); new base T (2/2); total (40/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.06e-01 | |||||||||||
GACCATGCATATTCACATTCTCGGTATTTGCGGCACTTTCATGGGTTCGCTGGCGGTGCTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGTGCTGAACAAGGGCCTGCCCTACGTCTCCGGCCCCCAGTGGCTGGCCGA > NC_002947/635773‑636066 | gACCATGCATATTCACATTCTCGGTATTTGCGGCACTTTCATGGGTTCGCTGGCGGTGCTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGaa < 1:140715/148‑1 (MQ=255) cATGCATATTCACATTCTCGGTATTTGCGGCACTTTCATGGGTTCGCTGGCGGTGCTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGa < 6:173984/149‑1 (MQ=255) cATGCATATTCACATTCTCGGTATTTGCGGCACTTTCATGGGTTCGCTGGCGGTGCTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGa < 5:100457/149‑1 (MQ=255) cATGCATATTCACATTCTCGGTATTTGCGGCACTTTCATGGGTTCGATGGCGGTGCTGTCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGa < 8:323274/149‑1 (MQ=255) aTGCATATTCACATTCTCGGTATTTGCGGCACTTTCATGGGTTCGCTGGCGGTGCTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGAc > 6:1895/1‑149 (MQ=255) gCATATTCACATTCTCGGTATTTGCGGCACTTTCATGGGTTCGCTGGCGGTGCTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGATATCGAACTGAcc > 3:227540/1‑148 (MQ=255) ttCACATTCTCGGTATTTGCGGCACTTTCATGGGTTCGCTGGCGGTGCTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAgg < 4:231802/148‑1 (MQ=255) tttGCGGCACTTTCATGGGTTCGCTGGCGGTGCTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAg > 5:245512/1‑149 (MQ=255) tttGCGGCACTTTCATGGGTTCGCTGGCGGTGCTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAg > 5:317357/1‑149 (MQ=255) cGGCACTTTCATGGGTTCGCTGGCGGTGCTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTgg < 1:55972/149‑1 (MQ=255) ggCACTTTCATGGGTTCGCTGGCGGTGCTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGa < 6:127791/149‑1 (MQ=255) ggCACTTTCATGGGTTCGCTGGCGGGGCTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGa < 8:201288/149‑1 (MQ=255) cTTTCATGGGTTCGCTGGCGGTGCTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCg > 2:360351/1‑149 (MQ=255) tttCATGGGTTCGCTGGCGGTGCTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCgg > 2:170893/1‑149 (MQ=255) tttCATGGGTTCGCTGGCGGTGCTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCgg > 2:320669/1‑149 (MQ=255) aTGGGTTCGCTGGCGGTGCTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTAt < 8:257702/123‑1 (MQ=255) aTGGGTTCGCTGGCGGTGCTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTAt > 7:257702/1‑123 (MQ=255) tGGGTTCGCTGGCGGTGCTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGgcgc > 2:120635/1‑147 (MQ=255) tGGGTTCGCTGGCGGTGCTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCAGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCa < 6:245512/149‑1 (MQ=255) gggTTCGCTGGCGGTGCTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGgcgc > 7:77198/1‑146 (MQ=255) ttCGCTGGCGGTGCTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCTGGACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGCACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGAc > 1:88606/1‑149 (MQ=255) ttCGCTGGCGGTGCTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGAcc > 7:310904/1‑149 (MQ=255) cTGGCGGTGCTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCCGCTGGATCCGGCGCCAGACCtggt > 8:322329/1‑149 (MQ=255) tGGCGGTGCTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCtggtg > 3:115152/1‑149 (MQ=255) gCGGTGCTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCtggtgg < 7:106930/148‑1 (MQ=255) ggTGCTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATc < 6:177265/128‑1 (MQ=255) ggTGCTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATc > 5:177265/1‑128 (MQ=255) cTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCgg < 6:317357/149‑1 (MQ=255) cTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCg < 3:291570/148‑1 (MQ=255) ggAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCa > 2:3232/1‑149 (MQ=255) ggAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCa < 5:104317/149‑1 (MQ=255) aCTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGt < 5:1895/149‑1 (MQ=255) cACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCgg > 2:292650/1‑149 (MQ=255) cgcgTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCtgg > 5:37503/1‑118 (MQ=255) cgcgTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCtgg < 6:37503/118‑1 (MQ=255) cgcgGCACCGGCTCT‑GACTCCAACGTCTATACCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGc < 6:259890/147‑1 (MQ=255) tCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCa < 1:3232/149‑1 (MQ=255) cGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCgg > 2:318714/1‑149 (MQ=255) gCTCT‑GACGGCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGtt < 2:88606/149‑1 (MQ=255) gCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGtt < 8:281953/149‑1 (MQ=255) gCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGtt < 1:170893/149‑1 (MQ=255) gCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGtt < 4:371482/149‑1 (MQ=255) aCGCCAACGTTTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAAt < 1:320669/147‑1 (MQ=255) aCGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGATATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAAt < 4:227540/147‑1 (MQ=255) gCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGt > 1:332677/1‑149 (MQ=255) gCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGt > 7:111282/1‑149 (MQ=255) cAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGTGc > 5:162762/1‑149 (MQ=255) cAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGTGc > 7:202369/1‑149 (MQ=255) cAACGTCTATCCCCAGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGTGc > 7:319235/1‑149 (MQ=255) aaCGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGTGCt > 7:135636/1‑149 (MQ=255) tCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGTGCTgca > 7:258614/1‑146 (MQ=255) cccccGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGTGCTGAACAAggg > 2:32734/1‑149 (MQ=255) cccccGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGTGCTGAACAAggg > 1:189522/1‑149 (MQ=255) ccccGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGTCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGt < 3:280504/136‑1 (MQ=255) ccccGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCgg > 7:117281/1‑126 (MQ=255) ccccGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCgg < 8:117281/126‑1 (MQ=255) ccccGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGt > 4:280504/1‑136 (MQ=255) ccccGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGTGCTGAACAAGGGc > 7:154032/1‑149 (MQ=255) ctccccACCCAGCTCCAAGCCCAGGCTATCGAACTCACCCAAGCCGATCACCCCGCCCAGCTGGATCCGGCTCCAGACCTTGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGTGCTGAACAAGGTCCTGcc < 6:288562/144‑1 (MQ=255) gCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGTGCTGAACAAGGGCCTGCCCTAc < 1:360351/149‑1 (MQ=255) ccAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGTGCTGAACAAGGGCCTg > 7:47861/1‑139 (MQ=255) ccAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGTGCTGAACAAGGGCCTg < 8:47861/139‑1 (MQ=255) gCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGTGCTGAACAAGGGCCTGCCCTACGTCTCCg < 4:115152/149‑1 (MQ=255) gCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGGAGCGCGGCAACCCAGCGGTTGAATACGTGCTGAACAAGGGCCTGCCCTACGTCTCCg < 1:292650/149‑1 (MQ=255) tCGAAGCCCAGGGTATCGAACTGACACAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCCACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGTGCTGAACAAGGGCCTGCCCTACGTCTCCGGc > 7:312759/1‑149 (MQ=255) gAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGTGCTGAACAAGGGCCTGCCCTACGTCTCCGGccc > 4:188459/1‑149 (MQ=255) ccAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAg > 4:36995/1‑98 (MQ=255) ccAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAg < 3:36995/98‑1 (MQ=255) aGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGTGCTGAACAAGGGCCTGCCCTACGTCTCCGGCCCCCAGtgg > 4:110254/1‑149 (MQ=255) tCGTACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGTGCTGa < 8:60186/108‑1 (MQ=255) tCGTACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGTGCTGa < 8:65384/108‑1 (MQ=255) tCGTACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGTGCTGa > 7:65384/1‑108 (MQ=255) tCGTACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGTGCTGa > 7:60186/1‑108 (MQ=255) tCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGTGCTGAACAAGGGCCTGCCCTACGTCTCCGGCCCCCAGTGGCTGGcc < 1:120635/149‑1 (MQ=255) gAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGTGCTGAACAAGGGCCTGCCCTACGTCTCCGGCCCCCAGTGGCTGGCCGa > 6:380604/1‑149 (MQ=255) gAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGTGCTGAACAAGGGCCTGCCCTACGTCTCCGGCCCCCAGTGGCTGGCCGa > 1:219203/1‑149 (MQ=255) aaCTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGTGCTGAACAAGGGCCTGCCCTACGTCTCCg > 8:238354/1‑129 (MQ=255) aaCTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGTGCTGAACAAGGGCCTGCCCTACGTCTCCg < 7:238354/129‑1 (MQ=255) | GACCATGCATATTCACATTCTCGGTATTTGCGGCACTTTCATGGGTTCGCTGGCGGTGCTGGCCAAGGAACTTGGCCACCGCGTCACCGGCTCT‑GACGCCAACGTCTATCCCCCGATGAGCACCCAGCTCGAAGCCCAGGGTATCGAACTGACCCAAGGCTATGACCCGGCCCAGCTGGATCCGGCGCCAGACCTGGTGGTCATCGGCAACGCCATGTCGCGCGGCAACCCAGCGGTTGAATACGTGCTGAACAAGGGCCTGCCCTACGTCTCCGGCCCCCAGTGGCTGGCCGA > NC_002947/635773‑636066 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |