| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 58,435 | G→C | 5.8% | intergenic (‑346/+342) | PP_5424 ← / ← PP_0050 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 58,435 | 0 | G | C | 5.8% | 213.1 / 3.4 | 69 | intergenic (‑346/+342) | PP_5424/PP_0050 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (29/35); new base C (2/2); total (31/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.33e-01 | |||||||||||
ACCTCCGTGAGGCCGGCCATCGTCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGC > NC_002947/58289‑58581 | aCCTCCGTGAGGCCGGCCATCGTCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCt > 6:284721/1‑149 (MQ=255)aCCTCCGTGAGGCCGGCCATCGTCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTG‑AACTGCGCATTTGTCGGGCCTG‑GGGACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTg > 5:320228/1‑149 (MQ=255) ccTCCGTGAGGCCGGCCATCGTCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTg < 5:284721/149‑1 (MQ=255) ccTCCGTGAGGCCGGCCATCGTCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTg > 3:331121/1‑149 (MQ=255) cTCCGTGAGGCCGGCCATCGTCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTgg > 2:17051/1‑149 (MQ=255) ccGTGAGGCCGGCCATCGTCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGCAGCTg < 7:340185/146‑1 (MQ=255) ccGTGAGGCCGGCCATCGTCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTg > 8:340185/1‑146 (MQ=255) gccggccATCGTCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTGAGGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTg < 1:98913/149‑1 (MQ=255) gccggccATCGTCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTg > 4:291623/1‑148 (MQ=255) gccggccATCGTCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAACCAGCTTCCTCTgc < 5:143400/149‑2 (MQ=255) ccggccATCGTCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGaa < 8:12397/149‑1 (MQ=255) ccggccATCGTCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGaa < 4:38755/149‑1 (MQ=255) cATCGTCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAagtagt < 5:275661/149‑1 (MQ=255) tCGTCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGa > 4:365281/1‑149 (MQ=255) tCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGAcgg > 6:19211/1‑149 (MQ=255) tGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGAcggc‑gg < 5:19211/149‑1 (MQ=255) cATCAGATCATGATTGTCACGGGTTCCGCTTTGGATCTCCTTGCAATTGAGTGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGAcggc‑gg < 7:178645/147‑1 (MQ=255) aTCAGATCTTGATTGACACGCCTGCCGCTTTGGATAGCCTTGAAATTGAGGGCTCCAACTGCGCATTTGTCGGGACTG‑CGTACCAGCATGATCCCCCTCAAAATTGGCAGCAGAGGAAGCTGGTTACTCTGAAGTAGTGAcggctcgca > 5:39400/1‑144 (MQ=255) aGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTg > 6:289021/1‑149 (MQ=255) gATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGc < 3:291623/149‑1 (MQ=255) gattgaCACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTG‑AACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTc < 6:320228/147‑1 (MQ=255) gaCACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGAt < 3:306775/148‑1 (MQ=255) acacGCGTGCCGCTTTGGATAGCCTTGCAATTGCGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTCCCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGCTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGAtt < 4:231796/148‑1 (MQ=255) acGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCt > 8:198448/1‑148 (MQ=255) gcgcgcCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGaa > 4:294049/1‑149 (MQ=255) gcgTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGaa < 4:79221/149‑1 (MQ=255) tGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGTCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑ccc < 8:177472/149‑1 (MQ=255) ccGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑ccc > 7:52826/1‑147 (MQ=255) ccGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCaa < 7:198448/149‑1 (MQ=255) cGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCTAGTTTGGCAGCGGAGGAAGCTGGTTCGTCGGAAGTAGTGTCGGC‑GGGCATTGCCAGTCGGAGTCTGAA‑cgctag > 8:297619/1‑144 (MQ=255) cGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAg > 1:281344/1‑149 (MQ=255) cGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAg < 3:246534/149‑1 (MQ=255) gCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAgg < 2:281344/149‑1 (MQ=255) gCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGACGAAGCTGGTACCTCTGAAGTAGTGACGGC‑GGGCATTGACAGGCGGATACTGAA‑CCCAAgg > 8:318443/1‑149 (MQ=255) ggATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGc < 8:52826/148‑1 (MQ=255) tAGACTTGCAATTGAGGGCTGAAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTACTCTGAAGTAGTGACGGC‑GGGCATTGCCACTCGGATTCTGCA‑CCCAAGGTCgagag > 4:331665/1‑144 (MQ=255) cTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGACTAg < 2:289240/149‑1 (MQ=255) ttGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGACTAg > 2:132125/1‑148 (MQ=255) ttGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGACTAg > 8:123339/1‑148 (MQ=255) gCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGACTAGGAg > 1:243523/1‑149 (MQ=255) aTTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTTGCAGCAGAGGAACCAGCTTCCTCTg < 8:125414/87‑1 (MQ=255) aTTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTTGCAGCAGAGGAACCAGCTTCCTCTg > 7:125414/1‑87 (MQ=255) ggCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAACCCCAAGGTCGCCAGACTAGGAGCTAAAGGa < 1:17051/149‑1 (MQ=255) ggCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGACTAGGAGCTAAAGGAt < 2:243523/149‑1 (MQ=255) cTGAAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCACCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCGAGTCGGAATCTGAA‑CCCAAGGACGCCAGACTAGGAGCTAAAGGATCg > 2:42583/1‑149 (MQ=255) cTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGa < 2:205914/149‑1 (MQ=255) tGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGac > 8:276623/1‑149 (MQ=255) gcATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGactac < 3:365281/149‑1 (MQ=255) aTTTGTCGTGCCTG‑GGTACCAGAATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACTGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTActc < 2:115239/149‑1 (MQ=255) aTTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑CGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTActc > 7:238665/1‑149 (MQ=255) tCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCAt > 7:289273/1‑149 (MQ=255) cGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCAt < 6:326241/148‑1 (MQ=255) gggCGTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATcc < 7:318443/149‑1 (MQ=255) gggCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATcc < 3:294049/149‑1 (MQ=255) aGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGt < 5:289021/149‑1 (MQ=255) gCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCGAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGt > 5:123516/1‑148 (MQ=255) gCATGAGCCCCCACAAATTTCGCACCAGAGGATGCTGATACCTCTGAAGTAGATACGGC‑GGGCATTGCCAGACGGATACTGAA‑CCCAAGGTCGCCAGACTATGAGCTAAAGGATAGCTGCTACTACTCCTCATCCCTTACAGaaaatt > 6:210389/1‑146 (MQ=255) aTGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCAc < 1:366216/149‑1 (MQ=255) aGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCAcgc < 4:331121/148‑1 (MQ=255) cccccGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGCCTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCCAAAAGTCACGCgtc > 8:131040/1‑149 (MQ=255) cccccGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCgtc < 8:289273/149‑1 (MQ=255) cccaGCAATTTTGTCAGCAGAGGAAGCTGGTTCCTCTTAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTTCGACTACTCCTCATCCCTTACCGAAAAGTCACGCgtc < 3:331665/148‑1 (MQ=255) cccGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGACTAGGAGCTAAAg < 3:109846/102‑1 (MQ=255) cccGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGACTAGGAGCTAAAg > 4:109846/1‑102 (MQ=255) ttttGGCATCAGAGGTATCTGGTTCCTCTGTATTAGTTACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTaaa < 7:267072/149‑1 (MQ=255) ttttGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTaaa < 7:123339/149‑1 (MQ=255) ggCATCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACgg < 5:21026/148‑1 (MQ=255) ttcagAGGAACCAGCTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGcccg > 3:204340/3‑148 (MQ=255) agGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTc > 2:277519/1‑147 (MQ=255) gCTGGTTCCTCTGAAGAAGTGACGGCGGGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGAATAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCATTACCGAAAAGACACGCGTCGGTCGTAAACGGCCCTATCCAGGc > 1:197056/1‑148 (MQ=255) | ACCTCCGTGAGGCCGGCCATCGTCATGCATCAGATCTTGATTGACACGCGTGCCGCTTTGGATAGCCTTGCAATTGAGGGCTGCAACTGCGCATTTGTCGGGCCTG‑GGTACCAGCATGAGCCCCCGCAATTTTGGCAGCAGAGGAAGCTGGTTCCTCTGAAGTAGTGACGGC‑GGGCATTGCCAGTCGGATTCTGAA‑CCCAAGGTCGCCAGACTAGGAGCTAAAGGATCGCTGCGACTACTCCTCATCCCTTACCGAAAAGTCACGCGTCGGTCGTAAACGGCCCTTTCCAGGC > NC_002947/58289‑58581 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |