Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 793,656 T→C 5.5% intergenic (‑21/‑203) PP_0679 ← / → PP_0680 hypothetical protein/ATP‑dependent protease‑like protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947793,6560TC 5.5% 270.7 / 4.1 90intergenic (‑21/‑203)PP_0679/PP_0680hypothetical protein/ATP‑dependent protease‑like protein
Reads supporting (aligned to +/- strand):  ref base T (47/38);  new base C (3/2);  total (50/40)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.93e-01

AACAGCATGTTGCCCCAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCTTGCAAGGCGC  >  NC_002947/793508‑793804
                                                                                                                                                    |                                                                                                                                                     
aaCAGCATGTTGCCCCAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACt                                                                                                                                                       >  8:226902/1‑149 (MQ=255)
 aCAGCATGTTGCCCCAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTc                                                                                                                                                      >  3:350748/1‑149 (MQ=255)
            ccccAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACCGAGTTGCCAga                                                                                                                                            <  4:197332/148‑2 (MQ=255)
             cccAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCACGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTc                                                                                                                                          >  7:257901/1‑149 (MQ=255)
             cccAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTc                                                                                                                                          >  7:262859/1‑149 (MQ=255)
              ccAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCg                                                                                                                                         >  2:237540/1‑149 (MQ=255)
              ccAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGCCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCg                                                                                                                                         <  8:93945/149‑1 (MQ=255)
               cAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCGAGGTc                                                                                                                                          >  3:301686/1‑147 (MQ=255)
               cAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCgg                                                                                                                                        <  2:44820/149‑1 (MQ=255)
                   cGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGaaa                                                                                                                                    <  7:54601/149‑1 (MQ=255)
                   cGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGaaa                                                                                                                                    <  7:56651/149‑1 (MQ=255)
                        ttCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCttt                                                                                                                               <  5:1538/149‑1 (MQ=255)
                           gggCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTca                                                                                                                            <  5:198385/149‑1 (MQ=255)
                            ggCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACCGAGTTGCCAgaa                                                                                                                                           >  6:75903/1‑131 (MQ=255)
                            ggCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACCGAGTTGCCAgaa                                                                                                                                           <  5:75903/133‑3 (MQ=255)
                             gccgccTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTcacc                                                                                                                          >  5:185120/1‑149 (MQ=255)
                               cgccTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTATTAACCAAGGGTCAGGTTTTCTGGCACCTCTGTTGCCAGGTCGTGAAAGATGTTcaccca                                                                                                                        >  8:120879/1‑149 (MQ=255)
                                gccTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTcaccca‑c                                                                                                                      >  6:16073/1‑149 (MQ=255)
                                 ccTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTcac                                                                                                                           >  6:201911/1‑144 (MQ=255)
                                 ccTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTcac                                                                                                                           <  5:201911/144‑1 (MQ=255)
                                   tGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTcaccca‑cctg                                                                                                                   >  5:138139/1‑147 (MQ=255)
                                      cgcTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCgcgc                                                                                                                <  6:210194/149‑1 (MQ=255)
                                              ccATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCtgg                                                                                                          >  4:93511/1‑145 (MQ=255)
                                               cATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAg                                                                                                       >  8:30851/1‑149 (MQ=255)
                                                aTGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGt                                                                                                      <  5:300947/149‑1 (MQ=255)
                                                    cGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAg                                                                                                  >  4:306407/1‑149 (MQ=255)
                                                     gTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTg                                                                                                          >  8:354880/1‑140 (MQ=255)
                                                     gTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTg                                                                                                          <  7:354880/140‑1 (MQ=255)
                                                     gTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGCGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAg                                                                                                  >  6:206196/1‑148 (MQ=255)
                                                         aGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCAc                                                                                              >  2:241402/1‑148 (MQ=255)
                                                         aGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCAc                                                                                              <  5:59194/148‑1 (MQ=255)
                                                          gCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGa                                                                                            >  1:337071/1‑149 (MQ=255)
                                                            gagaCCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATc                                                                                          >  6:47198/1‑149 (MQ=255)
                                                                     gTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTg                                                                                 >  4:187055/1‑149 (MQ=255)
                                                                       gAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCg                                                                               >  8:299396/1‑149 (MQ=255)
                                                                        aaCAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCgt                                                                              >  5:216887/1‑149 (MQ=255)
                                                                           agagTACCCCGAAGAATCCGTTTCCAAGCATTTGTTCTCTTTGTCCTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCgttgt                                                                           <  8:257901/149‑1 (MQ=255)
                                                                           agagTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCgttgt                                                                           >  2:367403/1‑149 (MQ=255)
                                                                           agagTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCgttgt                                                                           <  8:262859/149‑1 (MQ=255)
                                                                            gagTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGTgttgtt                                                                          <  7:226902/149‑1 (MQ=255)
                                                                            gagTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCgtt                                                                             <  1:60719/146‑1 (MQ=255)
                                                                            gagTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCgtt                                                                             >  2:60719/1‑146 (MQ=255)
                                                                              gTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGa                                                                        <  5:121687/149‑1 (MQ=255)
                                                                                 cccAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGAtt                                                                      <  1:367403/148‑1 (MQ=255)
                                                                                 cccAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTg                                                                     <  5:206196/149‑1 (MQ=255)
                                                                                 cccAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTGTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTg                                                                     <  4:298257/149‑1 (MQ=255)
                                                                                  ccAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGc                                                                    >  7:118095/1‑149 (MQ=255)
                                                                                  ccAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGc                                                                    >  3:121128/1‑149 (MQ=255)
                                                                                   cAGAAGACTCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGTGTCAGGGGTTCTGGCAACTCGGTTGCAAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAgg                                                                                                 <  5:324359/119‑1 (MQ=255)
                                                                                   cAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCg                                                                   <  4:350748/149‑1 (MQ=255)
                                                                                   cAGAAGAATCCGTTTCAGAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGGTTatg                                                                                                 >  6:324359/1‑117 (MQ=255)
                                                                                    agaagaATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCg                                                                   >  8:87921/1‑148 (MQ=255)
                                                                                    agaagaATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCg                                                                   >  5:25789/1‑148 (MQ=255)
                                                                                    agaagaATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCg                                                                   >  3:305335/1‑148 (MQ=255)
                                                                                        gaaTCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGaaaaa                                                              <  5:16073/149‑1 (MQ=255)
                                                                                        gaaTCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGaaaaa                                                              <  1:241402/149‑1 (MQ=255)
                                                                                           tCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAAttt                                                           >  1:26034/1‑149 (MQ=255)
                                                                                               tttCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTg                                                       >  3:36074/1‑149 (MQ=255)
                                                                                                   aTAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTcac                                                   <  1:237540/149‑1 (MQ=255)
                                                                                                   aTAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTcac                                                   <  2:26034/149‑1 (MQ=255)
                                                                                                    tAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTcac                                                   >  7:136549/1‑148 (MQ=255)
                                                                                                      gCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACaa                                                 <  6:25789/148‑1 (MQ=255)
                                                                                                      gCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCAAGGTCGGGAAAGCTTTTCACACA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACaa                                                 >  7:315795/1‑148 (MQ=255)
                                                                                                      gCATTTGTTCACTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTcac                                                   >  1:294245/1‑146 (MQ=255)
                                                                                                       cATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTGTCTGGCAACTCGTTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCTCGCAGCTTGTAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGa                                               <  7:120879/149‑1 (MQ=255)
                                                                                                        aTTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGAc                                              >  8:101743/1‑149 (MQ=255)
                                                                                                           tGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACACA‑CCAGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTg                                            >  5:90634/1‑148 (MQ=255)
                                                                                                             ttCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCAc                                         >  6:326889/1‑149 (MQ=255)
                                                                                                                tctTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGC‑‑AAAATTTGCTGTCACAAGACTGCACCGGCt                                    >  3:226645/1‑149 (MQ=255)
                                                                                                                 ctTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGc                                     >  3:126551/1‑149 (MQ=255)
                                                                                                                  tttGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCt                                    >  4:250919/1‑149 (MQ=255)
                                                                                                                    tGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGC‑‑AAAATTTGCTGTCACAAGACTGCACCGGCTGCg                                 <  4:226645/148‑1 (MQ=255)
                                                                                                                     gTCTTAACCAAGGGTCAGGTTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGc                                  <  6:185120/148‑1 (MQ=255)
                                                                                                                      tCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTATTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTCTCACAACACTGCACAGGCtcaga                                >  3:211150/1‑145 (MQ=255)
                                                                                                                            ccAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATaaa                          <  4:305335/149‑1 (MQ=255)
                                                                                                                            ccAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATaaa                          >  5:266236/1‑149 (MQ=255)
                                                                                                                            ccAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATa                            >  2:55612/1‑147 (MQ=255)
                                                                                                                            ccAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATa                            >  5:72201/1‑147 (MQ=255)
                                                                                                                             cAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAg                         <  6:266236/149‑1 (MQ=255)
                                                                                                                                gggTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTcc                      <  7:101743/149‑1 (MQ=255)
                                                                                                                                 ggTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCAGCCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTcc                      >  1:94194/1‑149 (MQ=255)
                                                                                                                                            cTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCtt           <  8:38074/148‑1 (MQ=255)
                                                                                                                                            cTGGCAACCGAGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCTTg          >  4:91607/1‑149 (MQ=255)
                                                                                                                                            cTGGCAACCGAGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCTTg          >  6:360075/1‑149 (MQ=255)
                                                                                                                                             tGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCTTg          >  4:303394/1‑148 (MQ=255)
                                                                                                                                               gCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCTTGc         <  3:306407/147‑1 (MQ=255)
                                                                                                                                                cAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCTTGCAAg      <  7:87921/149‑1 (MQ=255)
                                                                                                                                                 aaCTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCTTGCAAgg     <  2:94194/149‑1 (MQ=255)
                                                                                                                                                 aaCTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCTTGCAAgg     <  5:47198/149‑1 (MQ=255)
                                                                                                                                                   cTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAAtt                                                            <  3:107436/92‑1 (MQ=255)
                                                                                                                                                   cTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAAtt                                                            >  4:107436/1‑92 (MQ=255)
                                                                                                                                                    tCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCTTGCAAGgcgc  >  2:377617/1‑149 (MQ=255)
                                                                                                                                                    tCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCTTGCAAGgcgc  >  1:100829/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
AACAGCATGTTGCCCCAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCTTGCAAGGCGC  >  NC_002947/793508‑793804

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑