| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 793,657 | C→G | 5.5% | intergenic (‑22/‑202) | PP_0679 ← / → PP_0680 | hypothetical protein/ATP‑dependent protease‑like protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 793,657 | 0 | C | G | 5.5% | 299.4 / 6.2 | 91 | intergenic (‑22/‑202) | PP_0679/PP_0680 | hypothetical protein/ATP‑dependent protease‑like protein |
| Reads supporting (aligned to +/- strand): ref base C (48/38); new base G (3/2); total (51/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.74e-01 | |||||||||||
ACAGCATGTTGCCCCAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCTTGCAAGGCGC > NC_002947/793509‑793804 | aCAGCATGTTGCCCCAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTc > 3:350748/1‑149 (MQ=255) ccccAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACCGAGTTGCCAga < 4:197332/148‑2 (MQ=255) cccAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCACGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTc > 7:257901/1‑149 (MQ=255) cccAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTc > 7:262859/1‑149 (MQ=255) ccAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCg > 2:237540/1‑149 (MQ=255) ccAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGCCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCg < 8:93945/149‑1 (MQ=255) cAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCGAGGTc > 3:301686/1‑147 (MQ=255) cAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCgg < 2:44820/149‑1 (MQ=255) cGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGaaa < 7:54601/149‑1 (MQ=255) cGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGaaa < 7:56651/149‑1 (MQ=255) ttCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCttt < 5:1538/149‑1 (MQ=255) gggCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTca < 5:198385/149‑1 (MQ=255) ggCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACCGAGTTGCCAgaa > 6:75903/1‑131 (MQ=255) ggCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACCGAGTTGCCAgaa < 5:75903/133‑3 (MQ=255) gccgccTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTcacc > 5:185120/1‑149 (MQ=255) cgccTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTATTAACCAAGGGTCAGGTTTTCTGGCACCTCTGTTGCCAGGTCGTGAAAGATGTTcaccca > 8:120879/1‑149 (MQ=255) gccTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTcaccca‑c > 6:16073/1‑149 (MQ=255) ccTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTcac > 6:201911/1‑144 (MQ=255) ccTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTcac < 5:201911/144‑1 (MQ=255) tGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTcaccca‑cctg > 5:138139/1‑147 (MQ=255) cgcTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCgcgc < 6:210194/149‑1 (MQ=255) ccATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCtgg > 4:93511/1‑145 (MQ=255) cATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAg > 8:30851/1‑149 (MQ=255) aTGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGt < 5:300947/149‑1 (MQ=255) cGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAg > 4:306407/1‑149 (MQ=255) gTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTg > 8:354880/1‑140 (MQ=255) gTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTg < 7:354880/140‑1 (MQ=255) gTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGCGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAg > 6:206196/1‑148 (MQ=255) aGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCAc > 2:241402/1‑148 (MQ=255) aGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCAc < 5:59194/148‑1 (MQ=255) gCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGa > 1:337071/1‑149 (MQ=255) gagaCCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATc > 6:47198/1‑149 (MQ=255) gTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTg > 4:187055/1‑149 (MQ=255) gAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCg > 8:299396/1‑149 (MQ=255) aaCAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCgt > 5:216887/1‑149 (MQ=255) agagTACCCCGAAGAATCCGTTTCCAAGCATTTGTTCTCTTTGTCCTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCgttgt < 8:257901/149‑1 (MQ=255) agagTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCgttgt < 8:262859/149‑1 (MQ=255) agagTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCgttgt > 2:367403/1‑149 (MQ=255) gagTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGTgttgtt < 7:226902/149‑1 (MQ=255) gagTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCgtt < 1:60719/146‑1 (MQ=255) gagTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCgtt > 2:60719/1‑146 (MQ=255) gTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGa < 5:121687/149‑1 (MQ=255) cccAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGAtt < 1:367403/148‑1 (MQ=255) cccAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTg < 5:206196/149‑1 (MQ=255) cccAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTGTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTg < 4:298257/149‑1 (MQ=255) ccAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGc > 7:118095/1‑149 (MQ=255) ccAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGc > 3:121128/1‑149 (MQ=255) cAGAAGACTCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGTGTCAGGGGTTCTGGCAACTCGGTTGCAAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAgg < 5:324359/119‑1 (MQ=255) cAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCg < 4:350748/149‑1 (MQ=255) cAGAAGAATCCGTTTCAGAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGGTTatg > 6:324359/1‑117 (MQ=255) agaagaATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCg > 5:25789/1‑148 (MQ=255) agaagaATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCg > 3:305335/1‑148 (MQ=255) agaagaATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCg > 8:87921/1‑148 (MQ=255) gaaTCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGaaaaa < 5:16073/149‑1 (MQ=255) gaaTCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGaaaaa < 1:241402/149‑1 (MQ=255) tCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAAttt > 1:26034/1‑149 (MQ=255) tttCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTg > 3:36074/1‑149 (MQ=255) aTAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTcac < 1:237540/149‑1 (MQ=255) aTAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTcac < 2:26034/149‑1 (MQ=255) tAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTcac > 7:136549/1‑148 (MQ=255) gCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACaa < 6:25789/148‑1 (MQ=255) gCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCAAGGTCGGGAAAGCTTTTCACACA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACaa > 7:315795/1‑148 (MQ=255) gCATTTGTTCACTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTcac > 1:294245/1‑146 (MQ=255) cATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTGTCTGGCAACTCGTTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCTCGCAGCTTGTAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGa < 7:120879/149‑1 (MQ=255) aTTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGAc > 8:101743/1‑149 (MQ=255) tGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACACA‑CCAGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTg > 5:90634/1‑148 (MQ=255) ttCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCAc > 6:326889/1‑149 (MQ=255) tctTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGC‑‑AAAATTTGCTGTCACAAGACTGCACCGGCt > 3:226645/1‑149 (MQ=255) ctTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGc > 3:126551/1‑149 (MQ=255) tttGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCt > 4:250919/1‑149 (MQ=255) tGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGC‑‑AAAATTTGCTGTCACAAGACTGCACCGGCTGCg < 4:226645/148‑1 (MQ=255) gTCTTAACCAAGGGTCAGGTTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGc < 6:185120/148‑1 (MQ=255) tCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTATTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTCTCACAACACTGCACAGGCtcaga > 3:211150/1‑145 (MQ=255) ccAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATaaa > 5:266236/1‑149 (MQ=255) ccAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATaaa < 4:305335/149‑1 (MQ=255) ccAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATa > 5:72201/1‑147 (MQ=255) ccAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATa > 2:55612/1‑147 (MQ=255) cAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAg < 6:266236/149‑1 (MQ=255) gggTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTcc < 7:101743/149‑1 (MQ=255) ggTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCAGCCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTcc > 1:94194/1‑149 (MQ=255) cTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCtt < 8:38074/148‑1 (MQ=255) cTGGCAACCGAGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCTTg > 4:91607/1‑149 (MQ=255) cTGGCAACCGAGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCTTg > 6:360075/1‑149 (MQ=255) tGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCTTg > 4:303394/1‑148 (MQ=255) gCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCTTGc < 3:306407/147‑1 (MQ=255) cAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCTTGCAAg < 7:87921/149‑1 (MQ=255) aaCTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCTTGCAAgg < 5:47198/149‑1 (MQ=255) aaCTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCTTGCAAgg < 2:94194/149‑1 (MQ=255) cTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAAtt > 4:107436/1‑92 (MQ=255) cTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAAtt < 3:107436/92‑1 (MQ=255) tCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCTTGCAAGgcgc > 2:377617/1‑149 (MQ=255) tCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCTTGCAAGgcgc > 1:100829/1‑149 (MQ=255) | ACAGCATGTTGCCCCAGCCGCAGTTCGGGCCGCCTGGCGCTTCGGCCATGGCGTTCAGCGAGACCACGGTGAACAGAGTACCCAGAAGAATCCGTTTCATAGCATTTGTTCTCTTTGTCTTAACCAAGGGTCAGGGTTTCTGGCAACTCGGTTGCCAGGTCGGGAAAGCTTTTCACCCA‑CCCGCGCAGCTTGGAGTTTAGGCACGATCTAAAGGTTGCGTTGTTGATTGCGAAAAATTTGCTGTCACAAGACTGCACCGGCTGCGACATAAAGTCCCGTGGAGCCTTGCAAGGCGC > NC_002947/793509‑793804 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |