| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 860,711 | T→C | 6.5% | intergenic (‑40/+64) | PP_0741 ← / ← PP_0742 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 860,711 | 0 | T | C | 6.5% | 226.2 / 4.6 | 77 | intergenic (‑40/+64) | PP_0741/PP_0742 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (37/35); new base C (3/2); total (40/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.37e-01 | |||||||||||
ACGGCACAGGTCGGAGGCCTTGTGGCCGCCGTTGTAGCGCACGCTGTGCCCGGTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCCTGGCCACTGAGCCATGCGCCCTCGACTCGGCCGGACAGGCACCAGT > NC_002947/860564‑860857 | aCGGCACAGGTCGGAGGCCTTGTGGCCGCCGTTGTAGCGCACGCTGTGCCCGGTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACtt < 8:314942/148‑1 (MQ=255)aCGGCACAGGTCGGAGGCCTTGTGGCCGCCGTTGTAGCGCACGCTGTGCCCGGTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACtt < 8:234718/148‑1 (MQ=255) gTCGGAGGCCTTGTGGCCGCCGTTGTAGCGCACGCTGTGCCCGGTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGttt < 5:372449/149‑1 (MQ=255) ggAGGCCTTGTGGCCGCCGTTGTAGCGCACGCTGTGCCCGGTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTAtt > 6:184851/1‑149 (MQ=255) ggAGGCCTTGTGGCCGACGTTGTAGCGCACGCTGTGCCCGGTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTAtt > 2:168565/1‑149 (MQ=255) ggCCTTGTGGCCGCCGTTGTAGCGCACGCTGTGCCCGGTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCa < 2:288121/149‑1 (MQ=255) gCCTTGTGGCCGCCGTTGTAGCGCACGCTGTGCCCGGTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGTAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAAGTTGTACAGGTTTATTTCa < 4:110305/148‑1 (MQ=255) gCCTTGTGGCCGCCGTTGTAGCGCACGCTGTGCCCGGTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACAAGTTTCGAGTCACGTACAGGTTTAttttcg < 2:269975/149‑4 (MQ=37) cTTGTGGCCGCCGTTGTAGCGCACGCTGTGCCCGGTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGca > 6:214915/1‑149 (MQ=255) ttGTGGCCGCCGTTGTAGCGCACGCTGTGCCCGGTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGca > 6:11378/1‑148 (MQ=255) gccgccGTTGTAGCGCACGCTGTGCCCGGTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAgcgc > 2:210782/1‑149 (MQ=255) gTTGTAGCGCACGCTGTGCCCGGTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGt < 1:82237/149‑1 (MQ=255) gTTGTAGCGCACGCTGTGCCCGGTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGt > 6:333883/1‑149 (MQ=255) gTAGCGCACGCTGTGCCCGGTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTa < 5:214915/148‑1 (MQ=255) tAGCGCACGCTGTGCCCGGTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTAt < 8:94089/148‑1 (MQ=255) tAGCGCACGCTGTGCCCGGTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATg < 8:293750/149‑1 (MQ=255) gcgcACGCTGTGCCCGGTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGc < 6:143323/148‑1 (MQ=255) gcACGCTGTGCCCGGTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCaaa > 1:165372/1‑149 (MQ=255) cACGCTGTGCCCGGTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAAc > 7:143068/1‑149 (MQ=255) cGCTGTGCCCGGTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATACACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTa < 2:231600/149‑1 (MQ=255) tgCCCGGTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGTCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTa < 7:239584/147‑1 (MQ=255) tgCCCGGTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCCGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTa < 1:363800/147‑1 (MQ=255) cccGGTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTa < 4:8083/142‑1 (MQ=255) cccGGTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTa > 3:8083/1‑142 (MQ=255) cccGGTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACAAGTTTCGAGTCACGTACAGGTTTAttttc > 2:265573/1‑114 (MQ=25) cccGGTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCCAAAATAAACCTGTACAAGTTTCGAGTCACGTACAGGTTTAttttc < 1:265573/116‑3 (MQ=21) ccGGTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTAttttt < 5:333883/149‑1 (MQ=255) ggTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTg > 5:164470/1‑148 (MQ=255) ggTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTg > 1:61406/1‑148 (MQ=255) ggTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGt < 7:54648/149‑1 (MQ=255) aggcaggcGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGtata < 5:184851/148‑1 (MQ=255) ggcaggcGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGGACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGt < 1:168565/149‑1 (MQ=255) gcaggcGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGt > 4:88130/1‑148 (MQ=255) aggcGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGtat < 4:176984/143‑1 (MQ=255) aggcGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGtat > 3:176984/1‑143 (MQ=255) cccTGATGGCGATCCGCGGCTGGCTGGTGGCGGAAGTGTCGGGCATGGCTGCCGCCGAAAATACCCCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCa < 8:255977/147‑1 (MQ=255) gcTGATGTCGATACGCGGCTTGCTGTGGGCGGAATGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTGGATACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCAt < 5:10000/149‑1 (MQ=255) cGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAg < 6:308809/149‑1 (MQ=255) cGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAg < 1:344556/149‑1 (MQ=255) gcgGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCa > 7:260098/1‑137 (MQ=255) gcgGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCa < 8:260098/137‑1 (MQ=255) cTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGc < 2:165372/149‑1 (MQ=255) ttGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGc > 8:233131/1‑148 (MQ=255) gCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCcgcg > 4:122112/1‑149 (MQ=255) gCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCcgcg > 3:329793/1‑149 (MQ=255) gCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCcgcg > 5:203618/1‑149 (MQ=255) ggTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTc < 3:88130/149‑1 (MQ=255) ggTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTc > 5:208972/1‑149 (MQ=255) gTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCCTg < 1:198473/148‑1 (MQ=255) cATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAAGTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCCTGGCCa > 2:72524/1‑149 (MQ=255) cATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCCTGGCCa < 4:329793/149‑1 (MQ=255) cATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCCTGGCCa < 6:203618/149‑1 (MQ=255) ggCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCAc > 4:325143/1‑107 (MQ=255) ggCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCAc < 3:325143/107‑1 (MQ=255) gCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCCTGGCCACTGa < 5:11378/149‑1 (MQ=255) cTCCGAAAATAAACCTGTACGTTACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCCTGGCCACTGAGCCAt < 3:122112/149‑1 (MQ=255) cTCCGAAAATAAACCTCTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTACTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCCTGGCCACTGAGCCAt > 5:114574/1‑149 (MQ=255) tcagAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCATGGCCACTGAGCCATg > 6:286547/4‑149 (MQ=255) tCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCCTGGCCACTGAGCCATg > 3:247501/1‑149 (MQ=255) tgaaaTAAACCTGTACAAGTTTCGAGTCACGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCCTGGCCACTGAGCCATgcgc > 3:146430/3‑149 (MQ=37) aTAAACCTGTACAAGTTTCGAGTCACGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCCTGGCCACTGAGCCATGCGCCCTc > 5:333330/1‑149 (MQ=38) ccTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCCTGGCCACTGAGCCATGCGCCCTCGACTc > 2:103287/1‑149 (MQ=255) cTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCCTGGCCACTGAGCCATGCGCCCTCGACTCg < 7:233131/149‑1 (MQ=255) tACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCCTGGCCACTGAGCCATGCGCCCTCGACTCGGcc > 4:316263/1‑149 (MQ=255) gACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCCTGGCCACTGAGCCATGCGCCCTCGACTCGGCCGGa > 1:16202/1‑147 (MQ=255) gACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCCTGGCCACTGAGCCATGCGCCCTCGACTCGGCCGGa > 4:140019/1‑147 (MQ=255) aCTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCCTGGCCACTGAGCCATGCGCCCTCGACTCGGCCGGACa < 8:143068/148‑1 (MQ=255) aCTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCCTGGCCACTGAGCCATGCGCCCTCGACTCGGCCGGACAg > 6:7358/1‑149 (MQ=255) aCTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCCTGGCCACTGAGCCATGCGCCCTCGACTCGGCCGGACAg > 4:252493/1‑149 (MQ=255) cTCGAAACTTGTGCAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCCTGGCCACTGAGCCATGCGCCCTCGACTCGGCCGGACAgg > 1:352757/1‑149 (MQ=255) tCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCCTGGCCACTGAGCCATGCGCCCTCGACTCGGCCGGACAgg > 3:158866/1‑148 (MQ=255) tCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCCTGGCCACTGAGCCATGCGCCCTCGACTCGGCCGGACAgg > 6:197267/1‑148 (MQ=255) tCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTAGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCCTGGCCAATGAGCCATGCGCCCTCGACTCGGCCGGACAgg > 6:96487/1‑148 (MQ=255) gAAACTTGTACAGGTTTATTTCAGCACCGCGCTGAAGTTATGCCATCTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGCGCAAGCGCCGCGCTGCTTCCTGGCCACTGAGCCATGCGCCCTCGACTCGGCCGGACAGGCAc < 4:247501/149‑1 (MQ=255) gAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCCTGGCCACTGAGCCATGCGCCCTCGTCTCGGCCGGACAGGCAc > 5:27542/1‑149 (MQ=255) gAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCCTGGCCACTGAGCCATGCGCCCTCGACTCGGCCGGACAGGc < 3:252493/147‑1 (MQ=255) gAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCCTGGCCACTGAGCCATGCGCCCTCGACTCGGCCGGACAGGCAc < 1:210782/149‑1 (MQ=255) gAAACTTGAACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCCTGGCCACTGAGCCATGCGCCCTCGACTCGGCCGGACAGGCAc > 7:124931/1‑149 (MQ=255) cTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCCTGGCCACTGAGCCATGCGCCCTCGACTCGGCCGGACAGGCACCAGt > 3:28594/1‑149 (MQ=255) | ACGGCACAGGTCGGAGGCCTTGTGGCCGCCGTTGTAGCGCACGCTGTGCCCGGTCAGGCAGGCGCTGATGGCGATACGCGGCTTGCTGTGGGCGGAAGGGTCGTGCATGGCTGCCTCCGAAAATAAACCTGTACGTGACTCGAAACTTGTACAGGTTTATTTCAGCACAGCGCTGAAGTTATGCAAACTAGTATTTTTGTATAGTTCGGCATCACTCAAGGTGTTCGAGCAAGCGCCGCGCTGCTTCCTGGCCACTGAGCCATGCGCCCTCGACTCGGCCGGACAGGCACCAGT > NC_002947/860564‑860857 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |