| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,038,231 | T→C | 7.1% | P388P (CCA→CCG) | PP_0897 ← | class 1 fumarate hydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,038,231 | 0 | T | C | 7.1% | 241.6 / 6.7 | 84 | P388P (CCA→CCG) | PP_0897 | class 1 fumarate hydratase |
| Reads supporting (aligned to +/- strand): ref base T (38/40); new base C (3/3); total (41/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.62e-01 | |||||||||||
CATCAGGTACACGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCGGCATCACGGCCGGTCAGCATCTTGCCGT > NC_002947/1038087‑1038379 | cATCAGGTACACGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGc < 4:210177/149‑1 (MQ=255) cAGGTACACGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTa > 6:168833/1‑149 (MQ=255) aGGTACACGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTa < 6:251726/148‑1 (MQ=255) ggTACACGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTCCAAATCATGCCCAGCAGGCG‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACATGTACATTCGGGAAGCAGTGGTCGGGCCGGCTGGGCCTAc > 8:46390/1‑148 (MQ=255) cacGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTAGTCCCAGCCGGCCCGACCACt < 8:146816/148‑1 (MQ=255) cacGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTAGGCCCAGCCGGCCCGACCACt < 2:178732/148‑1 (MQ=255) acGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTc > 4:279676/1‑149 (MQ=255) acGGCCTTGTTGTCCTTGATCGCCTCGATAGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTc > 1:21156/1‑149 (MQ=255) cGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTc < 7:259411/148‑1 (MQ=255) cGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTc > 8:259411/1‑148 (MQ=255) cGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCg > 5:360918/1‑149 (MQ=255) ggCCTTGTTGTCCTTGATCGCCTCGATAGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGt < 2:21156/149‑1 (MQ=255) cTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTAGGCCCAGCCGGCCCGACCACtgctaccc < 7:69975/149‑8 (MQ=38) tgtTCTTTATCGCCTCGATGGCGGTGGGGCCAAGCTCGGACTTGTCAATAATTCCTTCCTTTTCTTTTTTTTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTca < 1:311262/148‑1 (MQ=255) gtCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCg > 5:155996/1‑149 (MQ=255) tCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCgg > 1:9252/1‑149 (MQ=255) ccTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCggg > 8:42124/1‑149 (MQ=255) ttGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGAC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTc > 3:307181/1‑149 (MQ=255) gATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTc < 5:214924/147‑1 (MQ=255) tCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGAcc > 1:37625/1‑149 (MQ=255) ccTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCggg > 3:2456/1‑149 (MQ=255) ccTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCggg > 5:111557/1‑149 (MQ=255) ccTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCAACCACCGGGTCGACCggg > 3:39956/1‑149 (MQ=255) cTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGc > 4:312417/1‑149 (MQ=255) tCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGcc > 4:206685/1‑149 (MQ=255) gCGGTCGGGCCACGCTCGGAGTTGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCTTACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACgta < 4:296207/149‑1 (MQ=255) cGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACgtag < 6:270965/149‑1 (MQ=255) gTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACgtagta < 7:324441/149‑1 (MQ=255) gCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATg > 2:238521/1‑148 (MQ=255) gCTCGGACTTGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCgg < 5:168833/149‑1 (MQ=255) gACTTGCCAATCATTCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGAGCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCttt < 3:351428/149‑1 (MQ=255) ttGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAg > 4:80534/1‑149 (MQ=255) gCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAgg < 8:270722/148‑1 (MQ=255) gCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAgg > 8:135716/1‑148 (MQ=255) gCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAg < 5:139707/147‑1 (MQ=255) gCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAg < 3:279676/147‑1 (MQ=255) aaTCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTa < 2:9252/149‑1 (MQ=255) aTCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGaa < 6:102420/131‑1 (MQ=255) aTCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGaa > 5:102420/1‑131 (MQ=255) aTCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTAc < 6:208675/149‑1 (MQ=255) aTGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCg < 3:80534/148‑1 (MQ=255) ccAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCGTACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGc < 6:209580/108‑1 (MQ=255) ccAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCGTACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGc > 5:209580/1‑108 (MQ=255) ccAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCaa < 7:135716/148‑1 (MQ=255) agGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTc < 6:360918/149‑1 (MQ=255) agGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTc < 3:312417/149‑1 (MQ=255) agGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTc < 6:179089/149‑1 (MQ=255) ggCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCg < 7:42124/149‑1 (MQ=255) ggCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCg < 6:132487/149‑1 (MQ=255) c‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTc < 8:6104/79‑1 (MQ=255) c‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTc > 7:6104/1‑79 (MQ=255) tGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGtt > 5:25256/1‑149 (MQ=255) cTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGtt < 6:111557/147‑1 (MQ=255) cTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGa < 2:37625/149‑1 (MQ=255) tCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAg < 2:349613/119‑1 (MQ=255) tCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAg > 1:349613/1‑119 (MQ=255) tCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGTCAACTCTTCGCCACGGTTGAg > 8:253040/1‑149 (MQ=255) gATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAg > 3:196124/1‑114 (MQ=255) gATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAg < 4:196124/114‑1 (MQ=255) gATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCAtt > 1:219482/1‑148 (MQ=255) tGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAAc > 8:33576/1‑149 (MQ=255) ggCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAAc > 5:249493/1‑148 (MQ=255) gCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCa < 4:147174/145‑1 (MQ=255) gAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATg > 3:154618/1‑149 (MQ=255) gAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATg > 2:77166/1‑149 (MQ=255) gAGTGAACTTGTCCATACGGGTAGCAGTCGACGGGACGGCTGGGCATACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTACTAGATGAAGCCGCCTTTCAGCTCTACCGGCAACTCTTCGCCACGGATGAGCATTTCAACCATg > 5:299918/1‑149 (MQ=255) gAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCt > 2:271922/1‑149 (MQ=255) aaCTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCtt < 1:238521/149‑1 (MQ=255) cTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTtgt < 6:155996/149‑1 (MQ=255) ttGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTAcc < 7:130525/105‑1 (MQ=255) ttGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTAcc > 8:130525/1‑105 (MQ=255) ttGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTtgtg > 1:130001/1‑149 (MQ=255) tCCATAAGTGTAGCAGTGGTCGGTCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTgcg < 7:319541/148‑1 (MQ=255) cATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGcgcg < 1:271922/148‑1 (MQ=255) tgacgaaGTGGTAGGCCCAGCCGGCCCGACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCGGCATCAc > 7:214499/7‑149 (MQ=255) tgacgaaGTGGTAGGCCCAGCCGGCCCGACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCGGCATCAc > 8:42703/7‑149 (MQ=255) gTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCGGCATCACg < 4:2456/149‑1 (MQ=255) cAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCGGCATCACGGCCg < 4:154618/149‑1 (MQ=255) aaGTGGTAGGCCCAGCCGGCCCGACCCCTTCGTCCCCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGGTGAGCATTTCAACCATGCGCTTGTGCGCGGCTTCACGGCCg > 7:247704/2‑149 (MQ=255) tGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCGGCATCACGGCCggac > 4:360115/1‑147 (MQ=255) gTCGGGCCTGCTGTGACTACCACTTCGTCACCCACCGGGTCGACCGGTCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCGGCATCACGGCCGGTCa < 4:39956/148‑1 (MQ=255) gTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCGGCATCACGGCCg > 2:29160/1‑144 (MQ=255) gTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCGGCATCACGGCCg < 1:29160/144‑1 (MQ=255) gCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCGGCATCACGGCCGGTCAGCATCt > 2:84776/1‑149 (MQ=255) tGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCGGCATCACGGCCGGTCAGCATCTTGCCGt > 1:226913/1‑149 (MQ=255) | CATCAGGTACACGGCCTTGTTGTCCTTGATCGCCTCGATGGCGGTCGGGCCACGCTCGGACTTGCCAATCATGCCCAGCAGGCC‑‑‑‑‑AGTCTGCTCAAGGATCTGGCGAGTGAACTTGTCCATACGGGTAGCAGTGGTCGGGCCGGCTGGGCCTACCACTTCGTCACCCACCGGGTCGACCGGGCCGACGTAGTAGATGAAGCGGCCTTTCAGGTCTACCGGCAACTCTTCGCCACGGTTGAGCATTTCAACCATGCGCTTGTGCGCGGCATCACGGCCGGTCAGCATCTTGCCGT > NC_002947/1038087‑1038379 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |