Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,058,719 C→A 5.9% V57F (GTC→TTC) ‡ sodB ← superoxide dismutase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,058,7190CA 5.9% 257.5 / 5.4 85V57F (GTC→TTC) ‡sodBsuperoxide dismutase
Reads supporting (aligned to +/- strand):  ref base C (36/44);  new base A (3/2);  total (39/46)
Fisher's exact test for biased strand distribution p-value = 6.57e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.42e-01

GTCGAAGGAACCGAAAGCGGCGTTGATGGCGTCAGCCAGTGCACCGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCGTGGTGATACTCCAGGGTTTCCTTGGAGATGTGCGGCTGCAGGGCATCATGG  >  NC_002947/1058573‑1058855
                                                                                                                                                  |                                                                                                                                        
gTCGAAGGAACCGAAAGCGGCGTTGATGGCGTCAGCCAGTGCACCGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTACAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGa                                                                                                                                        >  2:264348/1‑149 (MQ=255)
 tCGAAGGAACCGAAAGCGGCGTTGATGGTGTCAGCCAGTGCACCGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCACGAAGAGCTCTTGACGa                                                                                                                                        >  7:28717/1‑148 (MQ=255)
 tCGAAGGAACCGAAAGCGGCGTTGATGGCGTCAGCCAGTGCACCGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGAt                                                                                                                                       >  7:67226/1‑149 (MQ=255)
  cGAAGGAACCGAAAGCGGCGTTGATGGCGTCAGCCAGTGCACCGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGAtc                                                                                                                                      >  4:200028/1‑149 (MQ=255)
   gAAGGAACCGAAAGCGGCGTTGATGGCGTCAGCCAGTGCACCGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGAtct                                                                                                                                     >  4:206792/1‑149 (MQ=255)
    aaGGAACCGAAACCGGCGTTGATGGCGTCAGCCAGTGCACCGGTACGCAGGCCGCCGACGATTCGCGACAGGCAGTTCCAGTAGAAGGTCTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTATTGACGAtctc                                                                                                                                    >  4:173054/1‑149 (MQ=255)
     aGGAACCGAAAGCGGCGTTGATGGCGTCAGCCAGTGCACCGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATctct                                                                                                                                   <  4:346597/149‑1 (MQ=255)
          ccGAAAGCGGCGTTGATGGCGTCAGCCAGTGCACCGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGATCGTCAAGAGCTCTTcggg                                                                                                                              <  8:13169/149‑4 (MQ=255)
           cGAAAGCGGCGTTGATGGCGTCAGCCAGTGCACCGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAgg                                                                                                                             <  3:108647/149‑1 (MQ=255)
           cGAAAGCGGCGTTGATGGCGTCAGCCAGTGCACCGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAgg                                                                                                                             <  7:133211/149‑1 (MQ=255)
           cGAAAGCGGCGTTGATGGCGTCAGCCAGTGCACAGGAAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGATCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGACCTCTTGACGATCTCTTCAAgg                                                                                                                             >  5:205494/1‑149 (MQ=255)
            gAAAGCGGCGTTGATGGCGTCAGCCAGTGCACCGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAggg                                                                                                                            >  3:346731/1‑149 (MQ=255)
                 cggcgTTGATGGCGTCAGCCAGTGCACCGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTg                                                                                                                       <  1:367950/149‑1 (MQ=255)
                  ggcgTTGATGGCGTCAGCCAGTGCACCGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGAtc                                                                                                                                      >  8:248422/1‑133 (MQ=255)
                  ggcgTTGATGGCGTCAGCCAGTGCACCGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGAtc                                                                                                                                      <  7:248422/133‑1 (MQ=255)
                    cgTTGATGGCGTCAGCCAGTGCACCGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCt                                                                                                                    <  3:206792/149‑1 (MQ=255)
                     gTTGATGGTGTCAGCCAGTGCACCGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCtt                                                                                                                   <  8:28717/149‑1 (MQ=255)
                          tGGCGTCAGCCAGTGCACCGGTAGGCTGGCCGCCGCCGTTTGGCGACAAGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAAt                                                                                                              >  1:371942/1‑149 (MQ=255)
                             cGTGAGCCAGTGCACCGGTAGGCTGGCCGCCGCCGTTTGGCGACTGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCg                                                                                                           <  1:173638/149‑1 (MQ=255)
                             cGTCAGCCAGTGCACCGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCg                                                                                                           <  3:179189/149‑1 (MQ=255)
                                cAGCCAGTGCACCGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGGAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTg                                                                                                        >  1:317509/1‑149 (MQ=255)
                                 aGCCAGTGCACCGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTg                                                                                                        <  5:239410/148‑1 (MQ=255)
                                  gCCAGTGCACCGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGcc                                                                                                      >  3:289792/1‑149 (MQ=255)
                                  gCCAGTGCACCGGTAGGCTGGACGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGcc                                                                                                      >  3:272599/1‑149 (MQ=255)
                                   ccAGTGCACCGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTc                                                                                                            >  7:319058/1‑142 (MQ=255)
                                   ccAGTGCACCGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTc                                                                                                            <  8:319058/142‑1 (MQ=255)
                                          aCCGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGAc                                                                                                >  5:269123/1‑147 (MQ=255)
                                          aCCGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGAc                                                                                                >  8:192102/1‑147 (MQ=255)
                                            cggtgcacTGGCTGACGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAgg                                                                                            <  1:171379/142‑1 (MQ=255)
                                            cGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGGAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAgg                                                                                            <  2:317509/149‑1 (MQ=255)
                                            cGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTgg                                                                                                   <  5:286637/142‑1 (MQ=255)
                                            cGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTgg                                                                                                   >  6:286637/1‑142 (MQ=255)
                                            cGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAgg                                                                                            <  7:192102/149‑1 (MQ=255)
                                            cGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAgg                                                                                            <  6:141817/149‑1 (MQ=255)
                                                  gCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTc                                                                                      <  1:264348/149‑1 (MQ=255)
                                                    tGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAg                                                                                    >  1:141890/1‑149 (MQ=255)
                                                    tGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAg                                                                                    >  3:28408/1‑149 (MQ=255)
                                                      gccgccgccGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGt                                                                                  >  2:182474/1‑149 (MQ=255)
                                                       ccgccgccgTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGtt                                                                                 <  8:327400/149‑1 (MQ=255)
                                                        cgccgccgTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAg                                                                                    >  3:208537/1‑145 (MQ=255)
                                                        cgccgccgTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAg                                                                                    <  4:208537/145‑1 (MQ=255)
                                                         gccgccgTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTAGGTGCCTGGGACCAGGTTGTTCAGGTTCa                                                                               >  1:205447/1‑149 (MQ=255)
                                                          ccgccgTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCAc                                                                              >  2:358089/1‑149 (MQ=255)
                                                          ccgccgTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCAc                                                                              <  4:329888/149‑1 (MQ=255)
                                                            gccgTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGa                                                                            <  3:89350/149‑1 (MQ=255)
                                                                        cAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGtgttgt                                                                <  4:28408/149‑1 (MQ=255)
                                                                         aGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTtgtg                                                               >  1:24830/1‑149 (MQ=255)
                                                                          ggCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTgtgg                                                              <  5:206837/149‑1 (MQ=255)
                                                                           gctgTTCAAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCACGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCATGTTCACGACATAGGTGTTgtggt                                                             <  6:205494/146‑1 (MQ=255)
                                                                                 ccAGTAGAAGGTGTGGTTCCAGTCTTGAGCGGCGTTGTTGAAGATGCGGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTGGAATTCGGTGCCTGGGACCATGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTg                                                        <  5:95162/148‑1 (MQ=255)
                                                                                     tAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCgtg                                                   >  3:362326/1‑149 (MQ=255)
                                                                                       gAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCgtggt                                                 <  4:289792/149‑1 (MQ=255)
                                                                                       gAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCgtgg                                                  <  8:67226/148‑1 (MQ=255)
                                                                                       gAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCgtgg                                                  <  6:7306/148‑1 (MQ=255)
                                                                                       gAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCgtgg                                                  >  3:216008/1‑148 (MQ=255)
                                                                                       gAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCgtgg                                                  <  4:216008/148‑1 (MQ=255)
                                                                                         aGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCGTGGTGa                                               <  2:24830/149‑1 (MQ=255)
                                                                                         aGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCGTGGTGa                                               <  5:59509/149‑1 (MQ=255)
                                                                                               ggTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCGTGGTGATACTc                                          >  2:145169/1‑148 (MQ=255)
                                                                                                 ttCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCGTGGTGa                                               <  2:265985/141‑1 (MQ=255)
                                                                                                 ttCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCATGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCGTGGTGa                                               >  1:265985/1‑141 (MQ=255)
                                                                                                   ccAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCGTGGTGATACTCCAggg                                     >  3:175401/1‑149 (MQ=255)
                                                                                                   ccAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCGTGGTGATACTCCAgg                                      <  4:346731/148‑1 (MQ=255)
                                                                                                   ccAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCGTGGTGATAATCAAggg                                     >  4:25937/1‑149 (MQ=255)
                                                                                                    cAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCGTGGTGATACTCCAGGGt                                    >  2:304639/1‑149 (MQ=255)
                                                                                                     aGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCGTGGTGATACTCCAGGGtt                                   <  6:269123/149‑1 (MQ=255)
                                                                                                         ttGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCGTGGTGATACTCCAGGGTTTCCt                               >  5:241312/1‑149 (MQ=255)
                                                                                                           gAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCgtggt                                                 <  3:133333/129‑1 (MQ=255)
                                                                                                           gAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCgtggt                                                 >  4:133333/1‑129 (MQ=255)
                                                                                                             gcggcgTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCGTGGTGATACTCCAGGGTTTCCTTGga                           <  4:362326/149‑1 (MQ=255)
                                                                                                                          aGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCGTGGTGATACTCCAGGGTTTCCTTGGAGATGTGCGGCTGc              <  1:358089/149‑1 (MQ=255)
                                                                                                                           gATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCGTGGTGATACTCCAGGGTTTCCTTGGAGATGTGCGGCTGCa             <  2:321196/149‑1 (MQ=255)
                                                                                                                            aTGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCGTGGTGATACTCCAGGGTTTCCTTGGAGATGTGCGGCTGCAg            <  3:200028/149‑1 (MQ=255)
                                                                                                                              gccgccCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCGTGGTGATACTCCAGGGTTTCCTTGGAGATGTGCGGCTGCAgg           <  6:227986/148‑1 (MQ=255)
                                                                                                                              gccgccCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCCAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCGTGGTGATACTCCAGGGTTTCCTTGGAGATGTGCGGCTGCAggg          >  1:265303/1‑149 (MQ=255)
                                                                                                                               ccgccCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCGTGGTGATACTCCAGGGTTTCCTTGGAGATGTGCGGCTGCAGGGc         <  3:173054/149‑1 (MQ=255)
                                                                                                                                 gccCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCGTGGTGATACTCCAGGGTTTCCTTGGAGATGTGCGGCTGCAGGGcat       >  1:36797/1‑149 (MQ=255)
                                                                                                                                  ctggAAGAGATCGTCAAGAGCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCgtggt                                                 <  6:314191/103‑1 (MQ=255)
                                                                                                                                  ctggAAGAGATCGTCAAGAGCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCgtggt                                                 >  5:314191/4‑106 (MQ=255)
                                                                                                                                  ctggAAGAGATCGTCAAGAGCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCGTGGTGATACTCCAGGGTTTCCTTGGAGATGTGCGGCTGCAGGGcat       >  3:79897/4‑148 (MQ=255)
                                                                                                                                  cccGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCGTGGTGATACTCCAGTGTTTCCTTGGAGATGTGCGGCTGCAGGGcatc      <  3:25937/149‑1 (MQ=255)
                                                                                                                                  cccGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCGTGGTGATACTCCAGGGTTTCCTTGGAGATGTGCGGCTGCAGGGcat       >  4:6497/1‑148 (MQ=255)
                                                                                                                                   tggAAGAGATCGTCAAGAGCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCGTGGTGATACTCCAGGGTTTCCTTGGAGATGTGCGGCTGCAGGGcatca     >  4:82374/3‑149 (MQ=255)
                                                                                                                                      ccccgCTCTTGCCGATCTCTTCCAGGGGCTTGCCTGCGAATGCGGTGCCTGGGCCCAGGGTGTTCAGGGTCACGACATAGGTGTTGTGGTGCTTGTCGTGGTGATACTCCAGGGTTTCCTTGGTGATGTGCGGCTGCAGGGCATCATgg  <  7:339313/145‑1 (MQ=255)
                                                                                                                                      aaGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCGTGGTGATACTCCAGGGTTTCCTTGGAGATGTGCGGCTGCAGGGCATCATgg  <  1:332911/149‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                        
GTCGAAGGAACCGAAAGCGGCGTTGATGGCGTCAGCCAGTGCACCGGTAGGCTGGCCGCCGCCGTTTGGCGACAGGCAGTTCCAGTAGAAGGTGTGGTTCCAGACTTGAGCGGCGTTGTTGAAGATGCCGCCCGAAGAGCTCTTGACGATCTCTTCCAGGGTCTTGCCTTCGAATTCGGTGCCTGGGACCAGGTTGTTCAGGTTCACGACATAGGTGTTGTGGTGCTTGTCGTGGTGATACTCCAGGGTTTCCTTGGAGATGTGCGGCTGCAGGGCATCATGG  >  NC_002947/1058573‑1058855

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑