| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,250,523 | A→G | 7.0% | Y65Y (TAT→TAC) ‡ | nth ← | DNA glycosylase/apyrimidinic (AP) lyase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,250,523 | 0 | A | G | 7.0% | 200.6 / 4.7 | 71 | Y65Y (TAT→TAC) ‡ | nth | DNA glycosylase/apyrimidinic (AP) lyase |
| Reads supporting (aligned to +/- strand): ref base A (32/34); new base G (3/2); total (35/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.72e-01 | |||||||||||
TAGCGCCTCCAGCGCTTCGCGGGTTTGCGGTACCTGGCTGTCGTGGCGCTCGATCAGCAGCCGGCACGCTTCTATGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGCGACCAGCAGTTCAAACGGGGTCGTGTAGGCCAGTTCGGTCTTTGGGTCGGGGTTGT > NC_002947/1250376‑1250671 | tAGCGCCTCCAGCGCTTCGCGGGTTTGCGGTACCTGGCTGTCGTGGCGCTCGATCAGCAGCCGGCACGCTTCTATGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCAt < 8:34022/149‑1 (MQ=255) cgcCTCCAGCGCTTCGCGGGTTTGCGGTACCTGGCTGTCGTGGCGCTCGATCAGCAGCCGGCACGCTTCTATGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCa > 3:51892/1‑145 (MQ=255) ccTCCAGCGCTTCGCGGGTTTGCGGTACCTGGCTGTCGTGGCGCTCGATCAGCAGCCGGCACGCTTCTATGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATg > 6:305677/1‑149 (MQ=255) aGCGCTTCGCGGGTTTGCGGTACCTGGCTGTCGTGGCGCTCGATCAGCAGCCGGCACGCGTCTATGACATTCTTGGCCTTGGTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑ACCGCCCAGGGCATAGATGGCCTc > 1:240531/1‑149 (MQ=255) cgcTTCGCGGGTTTGCGGTACCTGGCTGTCGTGGCGCTCGATCAGCAGCCGGCACGCTTCTATGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCgg < 5:305677/149‑1 (MQ=255) ttCGCGGGTTTGCGGTACCTGGCTGTCGTGGCGCTCGATCAGCAGCCGGCACGCTTCTATGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCggggg > 1:261767/1‑149 (MQ=255) ttCGCGGGTTTGCGGTACCTGGCTGTCGTGGCGCTCGATCAGCAGCCGGCACGCTTCTATGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCggggg > 5:119668/1‑149 (MQ=255) cgcgGGTTTGCGGTACCTGGCTGTCGTGGCGCTCGATCAGCAGCCGGCACGCTTCTATGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTTGCTGAGGCCATC‑TATGCCCTGGGCGTTGAAGGCCTcagcgaa < 1:73295/148‑7 (MQ=37) cgcgGGTTTGCGGTACCTGGCTGTCGTGGCGCTCGATCAGCAGCCGGCACGCTTCTATGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGgt < 1:178142/148‑1 (MQ=255) cgGGTTTGCGGTACCTGGCTGTCGTGGCGCTCGATCAGCAGCCGGCACGCTTCTATGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGtt < 3:157345/149‑1 (MQ=255) gggTTTGCGGTACCTGGCTGTCGTGGCGCTCGATCAGCAGCCGGCACGCTTCTATGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTg < 5:49094/149‑1 (MQ=255) ggTACCTGGCTGTCGTGGCGCTCGATCAGCAGCCGGCACGCTTCTATGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACggg < 1:21094/149‑1 (MQ=255) cTGGCTGTCGTGGCGCTCGATCAGCAGCCGGCACGCTTCTATGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGaa > 3:42968/1‑147 (MQ=255) tCGTGGCGCTCGATCAGCAGCCGGCACGCTTCTATGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCggg < 8:180135/148‑1 (MQ=255) cGTGGCGCTCGAGCACCAGCCGTCACGCTTCTAGGACAGTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCa < 8:318557/149‑1 (MQ=255) gTGGCGCTCGATCAGCAGCCGGCACGCTTCTATGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAg > 1:2662/1‑149 (MQ=255) cgcTCGATCAGCAGCCGGCACGCTTCTATGACATTCTTGGCGTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGc > 3:347000/1‑149 (MQ=255) gcTCGATCAGCAGCCGGCACGCTTCTATGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACa < 6:311951/135‑1 (MQ=255) gcTCGATCAGCAGCCGGCACGCTTCTATGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACa > 5:311951/1‑135 (MQ=255) gcTCGATCAGCAGCCGGCACGCTTCTATGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGcc > 1:372263/1‑149 (MQ=255) gcTCGATCAGCAGCCGGCACGCTTCTATGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGcc > 7:309364/1‑149 (MQ=255) gATCAGCAGCCGGCACGCTTCTATGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCTACGGGGAACAGGCGGGCAGTGGCCtgtt > 7:322762/1‑146 (MQ=255) gATCAGCAGCCGGCACGCTTCTATGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCtt < 4:51892/147‑1 (MQ=255) aTCAGCAGCCGGCACGCTTCTATGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCttgtt < 4:329318/149‑1 (MQ=255) agcagcCGGCACGCTTCTATGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGa < 7:250719/148‑1 (MQ=255) gcCGGCACGCTTCTATGACATTCTTGGCCTTGCTGTTGTAACGC‑CAGATTGTCTTGATGTATTCGCTGAGGCGTTC‑AACGCCCAGGTCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCg < 2:240531/149‑1 (MQ=255) ccGGCACGCTTCTATGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGa < 2:2662/149‑1 (MQ=255) gCTTCTATGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGt > 5:295979/1‑149 (MQ=255) ttCTATGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCt > 4:139126/1‑128 (MQ=255) ttCTATGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCt < 3:139126/128‑1 (MQ=255) cTATGACATTCTTGGCCTTGCTGTTGTAAAGCGCCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGa > 1:45544/1‑149 (MQ=255) aTGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTg > 5:338384/1‑149 (MQ=255) tGACATTCTTGGCCTTGCTGTTTTAAAGA‑CCTATTGTCTTGATGTATTCTCTGCGGCCATC‑AACGCCCAGGGCATAGATGGCATCTGGGGTGTTGGCGCCGGGGAACAGTAGGGCAGTGGCATTCTTGACGAGGACGTCGGTGGATAgc > 4:294579/1‑149 (MQ=255) tGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGAtt > 4:330090/1‑147 (MQ=255) tGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGAtt < 4:42968/147‑1 (MQ=255) aCATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTgcgc < 3:330090/149‑1 (MQ=255) aCATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTgcg < 5:45835/148‑1 (MQ=255) ttCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGa < 8:229039/149‑1 (MQ=255) ggCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACa < 3:22896/146‑1 (MQ=255) gCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAgtg > 3:342980/1‑148 (MQ=255) gCTGTTGTAAAGC‑CGGATTGTCTTGATGTATTCGCTGAGGGCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGTGGGGGAACAGGCTGGCAGTGGCCTTGTTGACGCCGAAGTCGGTGGATTGCGCGGACAGTGTCACg < 5:192375/148‑1 (MQ=255) cTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGc < 3:87002/149‑1 (MQ=255) tgttgtAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTCGACCGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGc > 1:72451/1‑149 (MQ=255) tgttgtAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCAAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGc > 5:268523/1‑148 (MQ=255) ttgtAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGCGa < 2:372263/148‑1 (MQ=255) ttgtAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGCGa < 4:342980/148‑1 (MQ=255) tAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGCGACcag < 2:261767/149‑1 (MQ=255) tAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGCGACcag < 6:119668/149‑1 (MQ=255) gATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGCGACCAGCAGTTCa > 5:290865/1‑148 (MQ=255) gATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGCGACCAGCAGTTCa > 8:17459/1‑148 (MQ=255) aTTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGCGACCAGCAGTTCaaa > 3:68391/1‑149 (MQ=255) tCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGCTGGCCTCGTGGGTGTTGGCGACGGGGAACAGCCGGGCAGTGGCCTAGTTGACGCCGACATCGTTGGATTGCCCGGACAGTGTCACGGCGACCACCAGTTCAAACggg > 4:222127/1‑149 (MQ=255) tCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGCGACCAGCAGTTCAAACgg < 2:45544/148‑1 (MQ=255) tCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGCGACCAGCAGTTCAAACgg < 6:290865/148‑1 (MQ=255) cTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGCTGGATTGCGCGGACAGTGTCACGGCGACCAGCAGTTCAAACgggg > 6:250484/1‑149 (MQ=255) ttGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGCGACCAGCAGTTCAAACGGGGt > 1:33856/1‑149 (MQ=255) tGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGCGACCAGCAGTTCAAACgggg > 6:280168/1‑147 (MQ=255) tGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGCGACCAGCAGTTCAAACgggg < 5:280168/147‑1 (MQ=255) aTGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGCGACCAGCAGTTCAAACGGGGTCgt > 7:85068/1‑149 (MQ=255) tGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGCGACCAGCAGTTCAAACGGGGTCgtg < 6:340644/149‑1 (MQ=255) ccccgAGGCCATC‑TATGCCCTGGGCGTTGAAGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGCGACCAGCAGTTCAAACGGGGTCGTGTAGGc > 4:189283/5‑148 (MQ=38) gCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGCGACCAGCAGTTCAAACGGGGTCGTGTAGGCCa < 6:295979/149‑1 (MQ=255) cccgAGGCCATC‑TATGCCCTGGGCGTTGAAGGCCGCGGGGGTGTCGGCCACGGGGAACAGGAGTGCAGTGGCCTTGTTGCCGCCGACGTCGGGGGCTTGCGCGGCCAGTGTCACGGCGACCAGCAGTTCAACCGGGGTCGGGTAGGc > 3:54474/4‑147 (MQ=255) ccgAGGCCATC‑TATGCCCTGGGCGTTGAAGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGCGACCAGCAGTTCAAACGGGGTCGTGTAGGCCAg > 3:373056/3‑149 (MQ=38) aGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGCGACCAGCAGTTCAAACGGGGTCGTGTAGGCCAGt < 2:200031/147‑1 (MQ=255) ttC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGCGACCAGCAGTTCAAACGGGGTCGTGTAGGCCAGTTCGGTCt > 5:235254/1‑149 (MQ=255) ttC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGCGACCAGCAGTTCAAACGGGGTCGTGTAGGCCAGTTCGGTCt > 5:327798/1‑149 (MQ=255) aaCGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGCGACCAGCAGTTCAAACGGGGTCGTGTAGGCCAGTTCGGTCttt < 6:268523/148‑1 (MQ=255) aCGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGCGACCAGCAGTTCAAACGGGGTCGTGTAGGCCAGTTCGGTCTTTgg > 5:92398/1‑149 (MQ=255) ctgggCGTTGAAGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGCGACCAGCAGTTCAAACGGGGTCGTGTAGGCCAGTTCGGTCTTTGGGTCgg < 3:189283/147‑1 (MQ=255) aGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGCGACCAGCAGTTCAAACGGGGTCGTGTAGGCCAGTTCGGTCTTTGGGTCggg < 6:338384/149‑1 (MQ=255) ggCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGCGACCAGCAGTTCAAACGGGGTCGTGTAGGCCAGTTCGGTCTTTGGGTCGGGGt > 1:164824/1‑149 (MQ=255) aTAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGCGACCAGCAGTTCAAACGGGGTCGTGTAGGCCAGTTCGGTCTTTGGGTCGGGGTTGt > 2:346131/1‑149 (MQ=255) | TAGCGCCTCCAGCGCTTCGCGGGTTTGCGGTACCTGGCTGTCGTGGCGCTCGATCAGCAGCCGGCACGCTTCTATGACATTCTTGGCCTTGCTGTTGTAAAGC‑CCGATTGTCTTGATGTATTCGCTGAGGCCTTC‑AACGCCCAGGGCATAGATGGCCTCGGGGGTGTTGGCGACGGGGAACAGGCGGGCAGTGGCCTTGTTGACGCCGACGTCGGTGGATTGCGCGGACAGTGTCACGGCGACCAGCAGTTCAAACGGGGTCGTGTAGGCCAGTTCGGTCTTTGGGTCGGGGTTGT > NC_002947/1250376‑1250671 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |