| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,313,848 | G→A | 6.1% | A270V (GCT→GTT) | rapA ← | RNA polymerase‑associated protein RapA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,313,848 | 0 | G | A | 6.1% | 193.7 / 2.2 | 65 | A270V (GCT→GTT) | rapA | RNA polymerase‑associated protein RapA |
| Reads supporting (aligned to +/- strand): ref base G (30/31); new base A (2/2); total (32/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.68e-01 | |||||||||||
CTGGCCCAGCTGCTCGGGGGTGGCGGTCAGCAACAGTACGCCCGGAATCACTTGGGCCAGTTGCTCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGATGAAGCGCTCGGCGTCGAACAGCGCCACTTGCAGATTGAAGCGCCG > NC_002947/1313700‑1313996 | cTGGCGCAGGTGCTCGGGGGTGGCGGTCAGCAACAGTACGCCCGGATTCACTTGGGCCAGTTGCTCGACCAGGCAGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGGTTCGTCGACTACCAGCAGGTCcaacccag > 3:187054/1‑149 (MQ=255) tGGCCCAGCTGCTCGGGGGTGGCGGTCAGCAACAGTACGCCCGGAATCACTTGGGCCAGTTGCTCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCcagccagc > 5:41587/1‑149 (MQ=255) gCCCAGCTGCTCGGGGGTGGCGGGCAGCAACAGTACGCCCGGAATCACTTGGGCCAGTTGCTCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGAGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAgcgg < 2:142689/149‑1 (MQ=255) cccAGCTGCTCGGGGGTGGCGGTCAGCAACAGTACGCCCGGAATCACTTGGGCCAGTTGCTCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAgcggc < 1:151853/149‑1 (MQ=255) ccAGCTGCTCGGGGGTGGCGGTCAGCAACAGTACGCCCGGAATCACTTGGGCCAGTTGCTCGACCAGGACGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGAAGGTCCCAGCCAgcggc > 6:88362/1‑148 (MQ=255) cAGCTGCTCGGGGGTGGCGGTCAGCAACAGTACGCCCGGAATCACTTGGGCCAGTTGCTCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAgcggcg > 6:284970/1‑148 (MQ=255) cAGCTGCTCGGGGGTGGCGGTCAGCAACAGTACGCCCGGAATCACTTGGGCCAGTTGCTCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGa > 8:84643/1‑149 (MQ=255) aGCTGCTCGGGGGTGGCGGTCAGCAACAGTACGCCCGGAATCACTTGGGCCAGTTGCTCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGaa < 2:296736/149‑1 (MQ=255) tgctCGGGGGTGGCGGTCAGCAACAGTACGCCCGGAATCACTTGGGCCAGTTGCTCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAg > 5:48838/1‑149 (MQ=255) ctCGGGGGTGGCGGTCAGCAACAGTACGCCCGGAATCACTTGGGCCAGTTGCTCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAg < 2:285725/147‑1 (MQ=255) cgcGGGGGTGGCGGTCAGCAACAGTACGCCCGGAATCACTTGGGCCAGTTGCTCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAgc < 4:230803/146‑1 (MQ=255) tCGGGGGTGGCGGTCAGCAACAGTACGCCCGGAATCACTTGGGCCAGTTGCTCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGTGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAgcgc < 7:54888/149‑1 (MQ=255) tCGGGGGTGGCGGTCAGCAACAGTACGCCCGGAATCACTTGGGCCAGTTGCTCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAgcgc > 2:271967/1‑149 (MQ=255) cGGTCAGCAACAGTACGCCCGGAATCACTTGGGCCAGTTGCTCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGcc > 6:230463/1‑149 (MQ=255) ggTCAGCAACAGTACGCCCGGAATCACTTGGGCCAGTTGCTCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCt > 3:251135/1‑149 (MQ=255) tCAGCAACAGTACGCCCGGAATCACTTGGGCCAGTTGCTCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCttt < 7:300166/149‑1 (MQ=255) aggaaCAGTACGCGCGGAATCAGTTGGGCCAGTTGCTCGACCTGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACGAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTc < 3:363171/146‑1 (MQ=255) aGCAACAGTACGCCCGGAATCACTTGGGCCAGTTGCTCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTc < 1:9859/149‑1 (MQ=255) aaCAGTACGCCCGGAATCACTTGGGCCAGTTGCTCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTc < 4:251135/149‑1 (MQ=255) gTACGCCCGGAATCACTTGGGCCAGTTGCTCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAACGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATc > 8:29645/1‑148 (MQ=255) gTACGCCCGGAATCACTTGGGCCAGTTGCTCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAACGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATc > 8:23853/1‑148 (MQ=255) gCCCGGAATCACTTGGGCCAGTTGCTCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCa < 4:309963/149‑1 (MQ=255) ccGGAATCACTTGGGCCAGTTGCTCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTgg > 4:307393/1‑128 (MQ=255) ccGGAATCACTTGGGCCAGTTGCTCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTgg < 3:307393/128‑1 (MQ=255) aTCACTTGGGCCAGTTGCTCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAgcg < 6:24429/105‑1 (MQ=255) aTCACTTGGGCCAGTTGCTCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAgcg > 5:24429/1‑105 (MQ=255) aCTTGGGCCAGTTGCTCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAg > 2:12965/1‑149 (MQ=255) aCTTGGGCCAGTTGCTCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAg > 7:75428/1‑149 (MQ=255) gCTCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGc < 1:66996/148‑1 (MQ=255) cTCGACCAGGCGGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGGCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGc > 5:320319/1‑147 (MQ=255) cTCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACAAGCAGGTACCAGCCAGCGCCGAACAGCGCGTC‑CAGGGCCTTTTCCTCATCGACCAGCCACTCCAGGGaaaccaagaacg > 1:188428/1‑144 (MQ=255) tCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAg > 1:273352/1‑149 (MQ=255) ccAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTgg < 8:64085/149‑1 (MQ=255) ccACGCCGGATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGCCTTCGGCGACTACCAGCAGCGCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTgg < 4:187054/149‑1 (MQ=255) cAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTggg > 3:288407/1‑149 (MQ=255) gCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑ATGGGCCTTGTCGTCCTCGACCAGACGCTAGAGGGCACACAACGCAAGTAgggagt > 8:353565/1‑146 (MQ=255) cGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATcc > 7:93639/1‑149 (MQ=255) cGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATcc < 6:41587/149‑1 (MQ=255) ttCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGCCCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCg > 4:109013/1‑148 (MQ=255) ttCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCATCCACTCCAGGGCAACCAACGCCCGATGGGCATCCTCg > 5:348140/1‑148 (MQ=255) cgcTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACggg < 6:320319/149‑1 (MQ=255) aCCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGc < 6:48838/148‑1 (MQ=255) cTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTgg > 5:237229/1‑149 (MQ=255) ttCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTc > 8:260767/1‑129 (MQ=255) ttCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTc < 7:260767/129‑1 (MQ=255) ttCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGc > 3:75035/1‑149 (MQ=255) cGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCtt > 3:180094/1‑149 (MQ=255) gTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCtt < 1:271967/148‑1 (MQ=255) tGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTc < 5:230463/149‑1 (MQ=255) gCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTc < 7:158321/148‑1 (MQ=255) gCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTc > 8:158321/1‑148 (MQ=255) ccAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGa < 4:180094/149‑1 (MQ=255) ccAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGa < 5:284970/149‑1 (MQ=255) aGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGAt > 7:142485/1‑148 (MQ=255) aGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGATg < 6:237229/149‑1 (MQ=255) aGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGATg < 5:88362/149‑1 (MQ=255) aCCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGATGaa < 5:146422/149‑1 (MQ=255) aCCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGATGaa < 4:75035/149‑1 (MQ=255) cAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGATGAAgc > 7:254728/1‑149 (MQ=255) gCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGATGAAGCGCTCGGCGTc < 8:93639/149‑1 (MQ=255) tACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGATGAAGCGCTCGGCGTCGAACAGCGCCa > 6:349154/1‑149 (MQ=255) ccAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTCACTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGATGAAGCGCTCGGCGGCGAACAGCGCCAc > 1:241124/1‑149 (MQ=255) cagcagGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGATGAAGCGCTCGGCGTCGAACAGCGCCACtt < 3:109013/149‑1 (MQ=255) agcagGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGATGAAGCGCTCGGCGTCGAACAGCGCCACTTg < 5:349154/149‑1 (MQ=255) gcagGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGATGAAGCGCTCGGCGTCGAACAGCGCCACTTg > 6:220222/1‑148 (MQ=255) gcagGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGATGAAGCGCTCGGCGTCGAACAGCGCCACTTg > 6:18465/1‑148 (MQ=255) gcagGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGATGAAGCGCTCGGCGTCGAACAGCGCCACTTg > 5:172617/1‑148 (MQ=255) cagGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGATGAAGCGCTCGGCGTCGAACAGCGCCACTTGCa < 4:329425/149‑1 (MQ=255) agGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGATGAAGCGCTCGGCGTCGAACAGCGCCACTTg > 2:262505/1‑146 (MQ=255) agGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGATGAAGCGCTCGGCGTCGAACAGAGCCACTTg > 6:147467/1‑146 (MQ=255) agGTCCCAGCCAACGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGATGAAGCGCTCGGCGTCGAACAGCGCCACTTGCAg < 7:29645/149‑1 (MQ=255) agGTCCCAGCCAACGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGATGAAGCGCTCGGCGTCGAACAGCGCCACTTGCAg < 7:23853/149‑1 (MQ=255) gTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGACGAAGCGCTCGGCGTCGAACAGCGCCACTTGCAGAt < 6:132095/149‑1 (MQ=255) cagccagcGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGATGAAGCGCTCGGCGTCGAACAGCGCCACTTGCAGATTg > 2:102646/1‑147 (MQ=255) cagccagcGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGATGAAGCGCTCGGCGTCGAACAGCGCCACTTGCAGATTGaa < 8:75428/149‑1 (MQ=255) cagacagcTGCGAACAGCGGGTC‑CTGTGCCTTTTCGTCATCGTCCAGCCATTCGACTGCAACCAACTCCAGTTGGGCATCCTGGATGGGGTTGCTGGCGTCGATTTCGATGTAGCGGTCGGCGTCTAACAGCGCCACTTGCAGATTGaa < 6:348140/149‑1 (MQ=255) agccagcGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGATGAAGCGCTCGGCGTCGAACAGCGCCACTTGCAGATTGAAg > 6:326882/1‑149 (MQ=255) agccagcGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGATGAAGCGCTCGGCGTCGAACAGCGCCACTTGCAGATTGAAg < 4:288407/149‑1 (MQ=255) cagcGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGATGAAGCGCTCGGCGTCGAACAGCGCCACTTGCAGATTGAAgcgc > 3:198251/1‑149 (MQ=255) gcggcgAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGATGAAGCGCTCGGCGTCGAACAGCGCCACTTGCAGATTGAAGCGCCg < 2:273352/149‑1 (MQ=255) | CTGGCCCAGCTGCTCGGGGGTGGCGGTCAGCAACAGTACGCCCGGAATCACTTGGGCCAGTTGCTCGACCAGGCCGTATTCGGCGCTGACCTGGTCTTCGTGCCAGACCAGGTGGTGGGCTTCGTCGACTACCAGCAGGTCCCAGCCAGCGGCGAACAGCGCGTC‑CTGGGCCTTTTCGTCATCGACCAGCCACTCCAGGGCAACCAACGCCAGTTGGGCATCCTCGAACGGGTTGCTGGCGTCGCTTTCGATGAAGCGCTCGGCGTCGAACAGCGCCACTTGCAGATTGAAGCGCCG > NC_002947/1313700‑1313996 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |