| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 188,618 | G→A | 5.5% | G243R (GGG→AGG) | PP_0165 → | GGDEF domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 188,618 | 0 | G | A | 5.5% | 267.0 / 3.4 | 90 | G243R (GGG→AGG) | PP_0165 | GGDEF domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base G (42/43); new base A (2/3); total (44/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-02 | |||||||||||
CTGCCAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAGTT > NC_002947/188474‑188766 | cTGCCAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCt > 1:149929/1‑149 (MQ=255)cTGCCAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCt < 3:13887/149‑1 (MQ=255) tGCCAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAAGTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTg > 3:245143/1‑149 (MQ=255) ccAGAGTTGCCACGCACGCCGGAGCTACGCCTCTTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGt < 2:253286/148‑1 (MQ=255) ccAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGt < 6:15211/148‑1 (MQ=255) ccAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCCGGTCAGGCTGTc < 3:71167/149‑1 (MQ=255) cAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGTAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCCGGTCAGGCTGTcc < 2:329189/149‑2 (MQ=255) cAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCCGGTCAGGCTGTcc < 3:202032/149‑2 (MQ=255) agTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAc < 2:291747/149‑1 (MQ=255) gCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAc‑c‑gc‑‑c > 5:379513/1‑149 (MQ=255) gcacgcCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTAt > 2:147178/1‑149 (MQ=255) gcacgcCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTCAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTAt > 5:370237/1‑149 (MQ=255) cGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGaa < 6:370237/149‑1 (MQ=255) aCGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGc > 5:296871/1‑149 (MQ=255) cgccgcGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAg < 7:6274/147‑1 (MQ=255) ccgcGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTg > 8:74606/1‑148 (MQ=255) cgcgTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGaa > 7:143767/1‑149 (MQ=255) cgcgTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGaa > 1:329651/1‑149 (MQ=255) aGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCGAGTT‑‑TGAAATGCAGCGGAACAATc > 8:162351/1‑149 (MQ=255) gTGCAAGCTATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCTGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATc < 7:68337/148‑1 (MQ=255) gCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGaa < 2:321717/141‑1 (MQ=255) gCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGaa > 1:321717/1‑141 (MQ=255) cAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCggg > 3:111699/1‑148 (MQ=255) aaccGATGAACAAGATGGTCGAGAAACTCAAAGCCCTGTTAACCGAGCAGGCAGACCGCAGTGAGAGGCTGCGTGCGGAGTCCTACAAGGACAGCATGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGt > 2:339483/4‑148 (MQ=255) aaGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGt > 4:70720/1‑148 (MQ=255) aaGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGt > 1:330800/1‑148 (MQ=255) aGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTaa < 6:109416/149‑1 (MQ=255) aGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTaa < 6:296871/149‑1 (MQ=255) tGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAAc < 5:173415/149‑1 (MQ=255) gATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GCAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAg > 4:86012/1‑149 (MQ=255) gATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTA‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTgg > 7:163818/1‑146 (MQ=255) gagaAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGAcgcgc < 8:163818/148‑1 (MQ=255) agaAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGaa < 1:373611/107‑1 (MQ=255) agaAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGaa > 2:373611/1‑107 (MQ=255) agaAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGAcgcgcgc < 7:74606/149‑1 (MQ=255) gaAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGAc < 7:148356/142‑1 (MQ=255) gaAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGAc > 8:148356/1‑142 (MQ=255) aaaCTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACgcgcgcgc > 5:122159/1‑149 (MQ=255) aaaCTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACgcgcgcgc > 1:241263/1‑149 (MQ=255) aaaCTCAAAGCCCTGTTCACCGAGCAGGCCGAGAGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACgcgcgcgc < 7:97414/149‑1 (MQ=255) aCTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCg < 8:124377/149‑1 (MQ=255) aaaGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGAGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTa > 6:333375/1‑149 (MQ=255) cccTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACctg < 6:379513/149‑1 (MQ=255) cccTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGACCTACCAGGACAGCCTGACAGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAACACGCGCGCGCCGGTTACctg > 6:93923/1‑149 (MQ=255) ccTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACctgc < 8:143767/149‑1 (MQ=255) ttCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACctgctg < 4:111699/147‑1 (MQ=255) tCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTtg > 1:10289/1‑149 (MQ=255) aCCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTtgct > 4:162686/1‑149 (MQ=255) ccGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACgcgcgcgc < 2:196352/130‑1 (MQ=255) ccGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTtgctg > 4:261894/1‑149 (MQ=255) cGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTCTCTGGGAC‑C‑GC‑‑CGCTATTT‑‑TGAAAAGCAGCTGAACAATCGCGTAAGCAACCTGGAAGACGCGCGCGCCGCTTACCTGCTGTtgct > 1:118390/1‑149 (MQ=255) gCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCggg > 3:216051/1‑149 (MQ=255) cgtgcgcAGTGACCGGCTGCCTGCGCACTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑TAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATTCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAgg < 2:149929/146‑1 (MQ=255) gAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAggg < 7:162915/149‑1 (MQ=255) cgcCGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTCTTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGGTACCTGCTGTTGCTGCGGGGTCAGGGCct < 3:86012/149‑1 (MQ=255) cgcAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCct < 1:1504/149‑1 (MQ=255) gcAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGGTGTC‑‑GAACTCAGCATCCCTTTTTACTGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAg < 1:311596/149‑1 (MQ=255) aGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAACACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCtggctggc < 5:285080/149‑1 (MQ=255) cGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTc < 7:336837/133‑1 (MQ=255) cGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTc > 8:336837/1‑133 (MQ=255) cGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCt < 1:147178/149‑1 (MQ=255) caggctgTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAAcgccc > 8:201768/7‑149 (MQ=255) gcgGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACct > 5:354091/1‑107 (MQ=255) gcgGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACct < 6:354091/107‑1 (MQ=255) gTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTg > 1:116080/1‑149 (MQ=255) gTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGGTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTg < 7:162351/149‑1 (MQ=255) tCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAAcgccc > 7:192516/1‑142 (MQ=255) tCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAAcgccc < 8:192516/142‑1 (MQ=255) tACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTggcgg > 7:93955/1‑149 (MQ=255) aCCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTggcggc > 1:234535/1‑149 (MQ=255) tcgACAGCCCGGTCAGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTAGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAg > 3:116473/3‑149 (MQ=255) ggACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGc > 1:376853/1‑149 (MQ=255) cgACAGCCCGGTCAGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGc > 2:359315/2‑149 (MQ=255) gACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCg > 7:57248/1‑149 (MQ=255) aGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTAc < 7:201768/149‑1 (MQ=255) aGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTAc < 2:10289/149‑1 (MQ=255) ccTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCTACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCg > 2:148406/1‑149 (MQ=255) ccTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTCCCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAAcgc > 8:90498/1‑126 (MQ=255) ccTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAAcgc < 7:90498/126‑1 (MQ=255) ccTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTCGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTAcc > 2:318254/1‑148 (MQ=255) ccTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATAT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCg < 4:245143/149‑1 (MQ=255) cTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGa > 4:198007/1‑149 (MQ=255) gACCGGGCTGCC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGt < 3:29212/89‑1 (MQ=255) gACCGGGCTGCC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGt > 4:29212/1‑89 (MQ=255) aCCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGAc < 2:329651/147‑1 (MQ=255) aCCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGAc < 4:216051/147‑1 (MQ=255) aCCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGAc < 5:93923/147‑1 (MQ=255) aCCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCa < 8:53858/149‑1 (MQ=255) ccGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAg < 3:162686/149‑1 (MQ=255) ccGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAg < 5:333375/149‑1 (MQ=255) gggCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAgtt < 8:57248/149‑1 (MQ=255) | CTGCCAGAGTTGCCACGCACGCCGGAGCTACGCCGCGTAGTGCAAGCGATGAACCAGATGGTCGAGAAACTCAAAGCCCTGTTCACCGAGCAGGCCGAGCGCAGTGAGCGGCTGCGTGCGGAGTCCTACCAGGACAGCCTGACCGGGCTGTC‑‑GAAC‑C‑GC‑‑CGCTATTT‑‑TGAAATGCAGCTGAACAATCGGGTAAGCAACCTGGAAGACGCGCGCGCCGGTTACCTGCTGTTGCTGCGGGTTCAGGGCCTGGCTGGCCTGAACGCCCGCCTTGGCGGCCAGCGTACCGACCAGTT > NC_002947/188474‑188766 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |