| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,385,573 | C→A | 6.8% | G295V (GGC→GTC) | oprD ← | basic amino acid specific porin OprD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,385,573 | 0 | C | A | 6.8% | 196.8 / 4.1 | 67 | G295V (GGC→GTC) | oprD | basic amino acid specific porin OprD |
| Reads supporting (aligned to +/- strand): ref base C (29/33); new base A (2/3); total (31/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.97e-01 | |||||||||||
AGGCCTGGAATGCCGTATTCGGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAGATGTTGAA > NC_002947/1385426‑1385718 | aGGCCTGGAATGCCGTATTCGGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAgtcgccgtcgcc > 7:95693/1‑149 (MQ=255) gCCTGGAATGCCGTATTCGGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCgg > 8:137666/1‑149 (MQ=255) ccTGGAATGCCGTATTCGGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGt < 1:240460/149‑1 (MQ=255) cTGGAATGCCGTATTCGGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGt > 8:50136/1‑148 (MQ=255) gAATGCCGTATTCGGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCTTCGATACCATAACCATAGTCGCCGTCGCCGGTGa < 1:241344/147‑1 (MQ=255) gAATGCCGTATTCGGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACt > 5:308858/1‑149 (MQ=255) aaTGCCGTATTCGGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCATCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCACCGGCGACGGCGACta < 6:9055/149‑2 (MQ=255) aTGCCGTATTCGGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCACCGGCGACGGCGACtat < 1:214591/149‑3 (MQ=255) tGCCGTATTCGGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCACCGGCGACGGCGACtatg < 7:239314/149‑4 (MQ=255) ccGTCTTCTGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGCATTTCTCGTCTTCGGCGTTGACGTCGGAGCGGGCCACCGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATCGTCGCCGTCGCCGGTGACTTTCt < 8:73458/148‑1 (MQ=255) cGTATTCGGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTgg > 8:237442/1‑149 (MQ=255) gAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAggg > 3:238474/1‑149 (MQ=255) gTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTg < 8:256330/129‑1 (MQ=255) gTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTg > 7:256330/1‑129 (MQ=255) gTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGTGTGAAGgtgt < 1:146231/149‑1 (MQ=255) tCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGtgtg < 2:70945/149‑1 (MQ=255) tCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCAGAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGgtgt > 5:279994/1‑148 (MQ=255) gCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAgcgc > 7:210415/1‑149 (MQ=255) gCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGAt < 4:238474/149‑1 (MQ=255) gCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGAt < 1:154682/149‑1 (MQ=255) ccTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGAtg < 3:172006/149‑1 (MQ=255) gCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTTGTAGGCCAGGGTGAAGTTGTGAGCGCCGAtgttg > 8:345681/1‑149 (MQ=255) cctggATTTCTGGTCTTGGGCGTTGTAGTCGGAGGGGTCCACTGAGTTGGACAGGATGATGGTGCCGCCACCGTCTATACCATAACCATAGTCGACGTCGCCGGTGACTTTCTGGTAGGACAGGGTGATGGTGTGAGCGCCGAtgttgt < 2:288501/146‑1 (MQ=255) cAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGAtgttg > 5:19701/1‑147 (MQ=255) cAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGAtgttg > 6:147838/1‑147 (MQ=255) cAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTa < 1:306007/149‑1 (MQ=255) cAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTa < 4:22239/149‑1 (MQ=255) aTTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGgcg > 2:91066/1‑149 (MQ=255) tcGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCAGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGa > 4:161557/1‑149 (MQ=255) gTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGa > 1:164091/1‑147 (MQ=255) cGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCt < 6:305251/148‑1 (MQ=255) cGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCt > 1:379381/1‑148 (MQ=255) gCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATCCCATAACCATAGTCGCCGTCGCCGGTGACTATCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGaa > 3:304740/1‑149 (MQ=255) ttGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAAcgc > 3:18308/1‑149 (MQ=255) gAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAAcgcgc > 8:242976/1‑149 (MQ=255) gAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAAcgcg < 7:50136/148‑1 (MQ=255) gAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCAACCGTCGATACCATAACCATAGTAGCCGTAGCCGCTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTTTAGGCGCACGACAGGCTGAAcgcgc > 4:261779/1‑149 (MQ=255) aGTCTGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCgg < 6:308858/149‑1 (MQ=255) cGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGtt < 7:137666/148‑1 (MQ=255) ggAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGccc > 1:317075/1‑127 (MQ=255) ggAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGccc < 2:317075/127‑1 (MQ=255) cACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACTATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGt > 1:204075/1‑149 (MQ=255) cACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAAcgcg < 1:115036/133‑1 (MQ=255) cACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAAcgcg > 2:115036/1‑133 (MQ=255) cACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGt > 7:154049/1‑149 (MQ=255) cgtGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGcc < 5:18836/145‑1 (MQ=255) ttGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCAt < 3:322161/148‑1 (MQ=255) ttGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATc < 5:147838/149‑1 (MQ=255) aGATGGTGCCGCCACCGTCGATACCAAAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCgg < 6:279994/149‑1 (MQ=255) ggTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACt > 4:51794/1‑149 (MQ=255) ccgccACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCgg < 3:243206/148‑1 (MQ=255) cgccACTGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTCAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCgg > 6:227186/1‑147 (MQ=255) cgccACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCa < 8:210415/149‑1 (MQ=255) cgccACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCa < 1:46463/149‑1 (MQ=255) gccACCGTAGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTTTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCag < 7:345681/149‑1 (MQ=255) aCCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGAt < 2:321546/75‑1 (MQ=255) aCCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGAt > 1:321546/1‑75 (MQ=255) gATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCg < 3:51794/148‑1 (MQ=255) gATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGc < 4:18308/149‑1 (MQ=255) ccataaccataGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCtt < 3:161557/149‑1 (MQ=255) cataaccataGTCGCCGTCGACGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGAGAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTg > 8:166872/1‑149 (MQ=255) aaccataGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCtt > 1:19808/1‑145 (MQ=255) aaccataGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCtt < 2:19808/145‑1 (MQ=255) cagaaaGTCACCGGCGACGGCGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGgtgt > 2:105519/6‑149 (MQ=255) ccataGGCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTc < 5:64015/149‑1 (MQ=255) cataGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTg < 4:198270/143‑1 (MQ=255) cataGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTg > 3:198270/1‑143 (MQ=255) ataGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCa > 1:228976/1‑148 (MQ=255) tcgccggcgccgGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCTGATATGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAgtt < 7:242976/149‑3 (MQ=255) cgtcgccgGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAGATGtt > 5:247274/1‑148 (MQ=255) cgtcgccgGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTAGTCCAGCTTGTCGCCATCGAAGGCGCGGTACACGGCAGAGCCTTCGCTCTTGGTGTCATAGAAGtt > 5:247271/1‑148 (MQ=255) tcgccgGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAGATGTTGaa < 8:95693/149‑1 (MQ=255) | AGGCCTGGAATGCCGTATTCGGCGAAGTTCAGGTCGTAGCGAGCCTGCCAGGATTTCTCGTCTTCGGCGTTGAAGTCGGAGCGGGCCACGGAGTTGGCCAGGAAGATGGTGCCGCCACCGTCGATACCATAACCATAGTCGCCGTCGCCGGTGACTTTCTGGTAGGCCAGGGTGAAGGTGTGAGCGCCGATGTTGTAGGCGCCCGACAGGCTGAACGCGCGGTTGTCCAGCTTGTCGCCATCGAAGGCGCGGTACTCGGCAGAGCCTTCGCTCTTGGTGTCATAGATGTTGAA > NC_002947/1385426‑1385718 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |