Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 74,173 A→T 5.1% M217L (ATG→TTG)  PP_0063 → lipid A biosynthesis lauroyl acyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00294774,1730AT 5.1% 243.5 / 2.6 79M217L (ATG→TTG) PP_0063lipid A biosynthesis lauroyl acyltransferase
Reads supporting (aligned to +/- strand):  ref base A (37/38);  new base T (2/2);  total (39/40)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.17e-01

GACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAAGAGATGTACAGCACCGATGTGAATGTGTCGGCGGCGGCGATGAGCAAG  >  NC_002947/74025‑74316
                                                                                                                                                     |                                                                                                                                                
gACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACa                                                                                                                                                  >  6:345259/1‑149 (MQ=255)
   cAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGc                                                                                                                                               >  2:206366/1‑149 (MQ=255)
     aggaaggCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACctgctg                                                                                                                                            >  6:43225/1‑149 (MQ=255)
     aggaaggCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTg                                                                                                                                            <  1:264264/149‑1 (MQ=255)
      ggaaggCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTgg                                                                                                                                           >  6:343827/1‑149 (MQ=255)
           gCATCCTCAGCGTGATCAAGTAAGTGCGGCGTGGTGGCGAGGTGGGTATGCCTGCCGACCCGTAGCCGGCTTAATCGGCGGTCGTGTTCGTACAGTTCCTCTGCACCCAGGCGCTGACCAGCAAGTTCTTGCCGAACATGCTGGc                                                                                                                                          <  7:310527/145‑1 (MQ=255)
            cATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTg                                                                                                                                     >  2:113173/1‑149 (MQ=255)
                    gCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCg                                                                                                                             <  2:40711/149‑1 (MQ=255)
                    gCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCg                                                                                                                             >  1:5718/1‑149 (MQ=255)
                     cGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCgg                                                                                                                            >  2:360232/1‑149 (MQ=255)
                      gTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGt                                                                                                                           <  8:277067/149‑1 (MQ=255)
                         aTCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAg                                                                                                                         <  1:43796/148‑1 (MQ=255)
                           cAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGgt                                                                                                                       <  8:345174/148‑1 (MQ=255)
                             aGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGgtgtg                                                                                                                    >  2:278921/1‑149 (MQ=255)
                             aGGAAGTGCGCCGGGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGgtgtg                                                                                                                    >  3:53667/1‑149 (MQ=255)
                              ggAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGgggtgt                                                                                                                   >  4:255669/1‑149 (MQ=255)
                                     cgcCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGCACGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGc                                                                                                             <  1:113173/149‑1 (MQ=255)
                                     cgcCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGAGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGc                                                                                                             <  3:243961/148‑1 (MQ=255)
                                       ccGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATg                                                                                                          >  1:139241/1‑149 (MQ=255)
                                          tggtggCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATgcgc                                                                                                       <  6:267961/149‑1 (MQ=255)
                                            gtggCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTg                                                                                                     >  1:100704/1‑149 (MQ=255)
                                                    gTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGcc                                                                                             <  5:271173/149‑1 (MQ=255)
                                                    gTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGcc                                                                                             >  8:250219/1‑149 (MQ=255)
                                                    gTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGcc                                                                                             <  4:318722/149‑1 (MQ=255)
                                                     gtggTATTACTGCCGACCCGGAGCCGGCCGAAACGGCGGGCGTGTTAGGAACGTTGCTCCGACCCCCGGCCCAGACCAGCAACATCCTGCCGCACAAGCATGGCCGTTGCAAGGCGGTAGGTGTGTTCCAGCATGCCCTGCAGTTGGCg                                                                                            >  8:125464/3‑149 (MQ=255)
                                                      gggTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCgg                                                                                           <  4:53667/149‑1 (MQ=255)
                                                       ggTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGa                                                                                          >  6:314813/1‑149 (MQ=255)
                                                        gTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGAt                                                                                         >  7:182454/1‑149 (MQ=255)
                                                         tATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATg                                                                                        <  4:172407/149‑1 (MQ=255)
                                                             ccTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTc                                                                                    >  1:90989/1‑149 (MQ=255)
                                                               tGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGGCCAGCATGTTCGGCACGAACTTGCTggtcag                                                                                                                                       >  3:251372/1‑92 (MQ=25)
                                                               tGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGGCCAGCATGTTCGGCACGAACTTGCTggtcag                                                                                                                                       <  4:251372/96‑5 (MQ=25)
                                                                 ccGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCggg                                                                                 <  6:332076/148‑1 (MQ=255)
                                                                 ccGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCggg                                                                                 <  1:360232/148‑1 (MQ=255)
                                                                 ccGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCggg                                                                                 <  1:243862/148‑1 (MQ=255)
                                                                      ccGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTc                                                                             >  4:266512/1‑147 (MQ=255)
                                                                      ccGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTc                                                                             >  4:122263/1‑147 (MQ=255)
                                                                      ccGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCaa                                                                           <  3:122263/149‑1 (MQ=255)
                                                                        ggAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAgg                                                                         <  2:209539/149‑1 (MQ=255)
                                                                              ggcggAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCg                                                                                   <  4:1415/133‑1 (MQ=255)
                                                                              ggcggAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCg                                                                                   >  3:1415/1‑133 (MQ=255)
                                                                                 ggAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTc                                                                 >  3:357681/1‑148 (MQ=255)
                                                                                  gAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGCCCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCg                                                                >  4:40168/1‑148 (MQ=255)
                                                                                   aaTCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGaa                                                              <  1:156545/149‑1 (MQ=255)
                                                                                     tCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGc                                                            >  1:162226/1‑149 (MQ=255)
                                                                                          gggcgTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTgcgc                                                       >  3:119275/1‑149 (MQ=255)
                                                                                           ggcgTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGcc                                                      <  5:314813/149‑1 (MQ=255)
                                                                                               tgtTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGaa                                                  <  3:41993/149‑1 (MQ=255)
                                                                                                gtTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCgg                                                    >  8:354365/1‑146 (MQ=255)
                                                                                                 ttCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGaa                                                  >  8:11077/1‑147 (MQ=255)
                                                                                                 ttCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAaga                                                <  5:343827/149‑1 (MQ=255)
                                                                                                    gTACCGTTCCTCGTCACCCAGGCGATGAGCAGCAAGGTCGTGCCGAAGATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAAGAGAt                                             <  7:125464/149‑1 (MQ=255)
                                                                                                    gTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAAGAGAt                                             <  1:206366/149‑1 (MQ=255)
                                                                                                      aCCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAAGAGATg                                            >  1:258027/1‑148 (MQ=255)
                                                                                                        cGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAAGAGATGTa                                          >  3:44153/1‑148 (MQ=255)
                                                                                                        cGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAAGAGATGTAc                                         <  2:5718/149‑1 (MQ=255)
                                                                                                          ttCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAAGAGATGTACAg                                       >  4:370641/1‑149 (MQ=255)
                                                                                                             cTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAAGAGATGTACAGCa                                     <  2:258027/148‑1 (MQ=255)
                                                                                                                ggCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAAGAGATGTACAGCACCg                                  <  3:266512/148‑1 (MQ=255)
                                                                                                                ggCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAAGAGATGTACAGCACCGa                                 <  7:250219/149‑1 (MQ=255)
                                                                                                                 gCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAAGAGATGTACAGCACCGAt                                <  3:255669/149‑1 (MQ=255)
                                                                                                                      cAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAAGAGATGTACAGCACCGATGTGaa                           >  5:210404/1‑149 (MQ=255)
                                                                                                                       aGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTc                                                                    >  8:311157/1‑107 (MQ=255)
                                                                                                                       aGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTc                                                                    <  7:311157/107‑1 (MQ=255)
                                                                                                                       aGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAagag                                               >  8:41829/1‑128 (MQ=255)
                                                                                                                       aGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAagag                                               <  7:41829/128‑1 (MQ=255)
                                                                                                                       aGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAAGAGATGTACAGCACCGATGTGAAt                          <  4:357681/149‑1 (MQ=255)
                                                                                                                          gcgcTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAAGAGATGTACAGCACCGATGTGAAtgt                        >  6:49533/1‑149 (MQ=255)
                                                                                                                                aCCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAAGAGATGTACAGCACCGATGTGAATGTGTcggc                  >  6:191983/1‑149 (MQ=255)
                                                                                                                                aCCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAAGAGATGTACAGCACCGATGTGAATGTGTcg                    <  4:119275/147‑1 (MQ=255)
                                                                                                                                  cAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAAGAGATGTACAGCACCGATGTGAATGTGTcggcgg                >  4:269931/1‑149 (MQ=255)
                                                                                                                                  cAGCAAGTTCGTGCCGAACATGCTGGCAGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTAGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAAGAGATGTACAGCACCGATGTGAATGTGTcggcgg                >  4:367408/1‑149 (MQ=255)
                                                                                                                                   aGCATGTTCGGCACGAACTTGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGaa                                                              <  8:178858/102‑1 (MQ=255)
                                                                                                                                   aGCATGTTCGGCACGAACTTGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGaa                                                              >  7:178858/1‑102 (MQ=255)
                                                                                                                                   aGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAAGAGATGTACAGCACCGATGTGAATGTGTcggcggc               <  2:139241/149‑1 (MQ=255)
                                                                                                                                   aGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAAGAGATGTACAGCACCGATGTGAATGTGTcggcggc               >  1:351821/1‑149 (MQ=255)
                                                                                                                                         ttCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAAGAGATGTACAGCACCGATGTGAATGTGTCGGCGGCGGCGAt         >  4:323313/1‑149 (MQ=255)
                                                                                                                                            gTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAAGAGATGTACAGCACCGATGTGAATGTGTCGGCGGCGGCGATGa       <  1:121554/148‑1 (MQ=255)
                                                                                                                                            gTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAAGAGATGTACAGCACCGATGTGAATGTGTCGGCGGCGGCGATGAg      <  2:100704/149‑1 (MQ=255)
                                                                                                                                               ccGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAAGAGATGTACAGCACCGATGTGAATGTGTCGGCGGCGGCGATGAGc     >  3:122670/1‑147 (MQ=255)
                                                                                                                                                cGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCGGCGGTTGCCGGATGGCGCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAAGAGATGTACAGCACCGATGTGAATGTGTCGGCGGCGGCGATGAGCAAg  <  7:58465/149‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                
GACCAAGGAAGGCATCCTCAGCGTGATCAAGGAAGTGCGCCGTGGTGGCCAGGTGGGTATTCCTGCCGACCCGGAGCCGGCGGAATCGGCGGGCGTGTTCGTACCGTTCCTCGGCACCCAGGCGCTGACCAGCAAGTTCGTGCCGAACATGCTGGCCGGTGGCAAGGCGGTAGGTGTGTTCCTGCATGCGCTGCGGTTGCCGGATGGCTCGGGCTTCAAGGTGTTCCTCGAAGCTGCGCCGGAAGAGATGTACAGCACCGATGTGAATGTGTCGGCGGCGGCGATGAGCAAG  >  NC_002947/74025‑74316

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: